Gene annotation
Transcriptome id Sobic.001G151900.2,Sobic.001G151900.1
Synonym Sb01g013200
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
DUF593 domain containing protein, expressed
UniProt C5WR25
Pfam PF04576
Panther DB PTHR31422 PTHR31422:SF0 PTHR31422:SF0 PTHR31422
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G54740 : Protein of unknown function, DUF593
RAP-DB (Rice) LOC_Os03g44800.1 : DUF593 domain containing protein, expressed
MaizeGDB (Corn) Zm00025a017232 , Zm00025a007593
Brachypodium KQK13942 , PNT74376
Barley HORVU5Hr1G092270.4 , HORVU5Hr1G092270.3 , HORVU5Hr1G092270.2 , HORVU5Hr1G092270.1
Wheat TraesCS5B02G373100 , TraesCS5D02G380300
Populus -


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cDNA sequences
Sobic.001G151900


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G222900 RNA recognition motif containing protein, putative, expressed K14411: RNA-binding protein Musashi
2 Sobic.001G418800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@N-acetylglucosaminyltransferase, putative, expressed -
3 Sobic.005G007700 expressed protein -
4 Sobic.003G000150 - -
5 Sobic.009G080200 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@CAPIP1, putative, expressed K14496: abscisic acid receptor PYR/PYL family
6 Sobic.003G264901 - -
7 Sobic.001G279200 PHLOEM 2-LIKE A10, putative, expressed -
8 Sobic.010G000700 zinc finger, C3HC4 type domain containing protein, expressed K11982: E3 ubiquitin-protein ligase RNF115/126
9 Sobic.002G174900 cysteine desulfurase 1, mitochondrial precursor, putative, expressed K04487: iscS, cysteine desulfurase
10 Sobic.008G165700 expressed protein -
11 Sobic.002G131300 bacterial transferase hexapeptide domain containing protein, expressed -
12 Sobic.001G191100 OsFBX157 - F-box domain containing protein, expressed -
13 Sobic.007G136700 YGL010w, putative, expressed -
14 Sobic.010G269600 RNA recognition motif containing protein, expressed K12897: transformer-2 protein
15 Sobic.001G423100 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein K09562: HSPBP1, hsp70-interacting protein
16 Sobic.010G137400 cysteine-rich receptor-like protein kinase 10 precursor, putative, expressed -
17 Sobic.007G054100 stress-induced protein, putative, expressed -
18 Sobic.002G095900 - -
19 Sobic.010G045600 G-patch domain containing protein, expressed K12840: RBM17, splicing factor 45
20 Sobic.002G365100 RNA recognition motif containing protein, putative, expressed -


Gene co-expression network
sample Sobic001G151900 Sobic001G151900 Sobic001G222900 Sobic001G222900 Sobic001G151900--Sobic001G222900 Sobic001G418800 Sobic001G418800 Sobic001G151900--Sobic001G418800 Sobic005G007700 Sobic005G007700 Sobic001G151900--Sobic005G007700 Sobic003G000150 Sobic003G000150 Sobic001G151900--Sobic003G000150 Sobic009G080200 Sobic009G080200 Sobic001G151900--Sobic009G080200 Sobic003G264901 Sobic003G264901 Sobic001G151900--Sobic003G264901 Sobic001G279200 Sobic001G279200 Sobic001G151900--Sobic001G279200 Sobic010G000700 Sobic010G000700 Sobic001G151900--Sobic010G000700 Sobic002G174900 Sobic002G174900 Sobic001G151900--Sobic002G174900 Sobic001G108900 Sobic001G108900 Sobic001G222900--Sobic001G108900 Sobic003G123000 Sobic003G123000 Sobic001G222900--Sobic003G123000 Sobic001G222900--Sobic005G007700 Sobic004G246700 Sobic004G246700 Sobic001G222900--Sobic004G246700 Sobic005G079800 Sobic005G079800 Sobic001G222900--Sobic005G079800 Sobic008G165100 Sobic008G165100 Sobic001G222900--Sobic008G165100 Sobic002G309800 Sobic002G309800 Sobic001G222900--Sobic002G309800 Sobic002G224700 Sobic002G224700 Sobic001G222900--Sobic002G224700 Sobic004G095300 Sobic004G095300 Sobic001G222900--Sobic004G095300 Sobic001G380500 Sobic001G380500 Sobic001G418800--Sobic001G380500 Sobic001G218800 Sobic001G218800 Sobic001G418800--Sobic001G218800 Sobic001G418800--Sobic002G174900 Sobic006G028300 Sobic006G028300 Sobic001G418800--Sobic006G028300 Sobic010G108900 Sobic010G108900 Sobic001G418800--Sobic010G108900 Sobic001G418800--Sobic001G151900 Sobic001G418800--Sobic001G222900 Sobic003G004700 Sobic003G004700 Sobic001G418800--Sobic003G004700 Sobic002G339500 Sobic002G339500 Sobic001G418800--Sobic002G339500 Sobic005G007700--Sobic001G222900 Sobic010G137400 Sobic010G137400 Sobic005G007700--Sobic010G137400 Sobic007G112900 Sobic007G112900 Sobic005G007700--Sobic007G112900 Sobic010G143200 Sobic010G143200 Sobic005G007700--Sobic010G143200 Sobic005G007700--Sobic008G165100 Sobic010G269600 Sobic010G269600 Sobic005G007700--Sobic010G269600 Sobic003G159450 Sobic003G159450 Sobic005G007700--Sobic003G159450 Sobic005G229000 Sobic005G229000 Sobic005G007700--Sobic005G229000 Sobic005G007700--Sobic010G000700 Sobic002G187801 Sobic002G187801 Sobic003G000150--Sobic002G187801 Sobic008G165700 Sobic008G165700 Sobic003G000150--Sobic008G165700 Sobic003G142700 Sobic003G142700 Sobic003G000150--Sobic003G142700 Sobic001G261597 Sobic001G261597 Sobic003G000150--Sobic001G261597 Sobic003G018900 Sobic003G018900 Sobic003G000150--Sobic003G018900 Sobic008G139700 Sobic008G139700 Sobic003G000150--Sobic008G139700 Sobic006G171700 Sobic006G171700 Sobic003G000150--Sobic006G171700 Sobic010G090900 Sobic010G090900 Sobic003G000150--Sobic010G090900 Sobic003G250500 Sobic003G250500 Sobic003G000150--Sobic003G250500 Sobic003G013600 Sobic003G013600 Sobic009G080200--Sobic003G013600 Sobic001G285000 Sobic001G285000 Sobic009G080200--Sobic001G285000 Sobic002G117200 Sobic002G117200 Sobic009G080200--Sobic002G117200 Sobic004G275200 Sobic004G275200 Sobic009G080200--Sobic004G275200 Sobic002G123200 Sobic002G123200 Sobic009G080200--Sobic002G123200 Sobic009G156300 Sobic009G156300 Sobic009G080200--Sobic009G156300 Sobic003G123300 Sobic003G123300 Sobic009G080200--Sobic003G123300 Sobic001G078200 Sobic001G078200 Sobic009G080200--Sobic001G078200 Sobic002G194700 Sobic002G194700 Sobic009G080200--Sobic002G194700 Sobic004G096300 Sobic004G096300 Sobic003G264901--Sobic004G096300 Sobic010G172200 Sobic010G172200 Sobic003G264901--Sobic010G172200 Sobic001G293800 Sobic001G293800 Sobic003G264901--Sobic001G293800 Sobic006G053700 Sobic006G053700 Sobic003G264901--Sobic006G053700 Sobic007G071000 Sobic007G071000 Sobic003G264901--Sobic007G071000 Sobic001G377000 Sobic001G377000 Sobic003G264901--Sobic001G377000 Sobic009G205600 Sobic009G205600 Sobic003G264901--Sobic009G205600 Sobic003G153800 Sobic003G153800 Sobic003G264901--Sobic003G153800 Sobic001G053900 Sobic001G053900 Sobic003G264901--Sobic001G053900 Sobic001G279200--Sobic002G174900 Sobic001G279200--Sobic008G165700 Sobic009G213400 Sobic009G213400 Sobic001G279200--Sobic009G213400 Sobic001G279200--Sobic006G171700 Sobic006G042200 Sobic006G042200 Sobic001G279200--Sobic006G042200 Sobic001G279200--Sobic001G151900 Sobic001G279200--Sobic001G222900 Sobic003G151800 Sobic003G151800 Sobic001G279200--Sobic003G151800 Sobic007G054100 Sobic007G054100 Sobic001G279200--Sobic007G054100 Sobic010G000700--Sobic010G269600 Sobic003G185200 Sobic003G185200 Sobic010G000700--Sobic003G185200 Sobic002G365100 Sobic002G365100 Sobic010G000700--Sobic002G365100 Sobic010G055500 Sobic010G055500 Sobic010G000700--Sobic010G055500 Sobic004G150400 Sobic004G150400 Sobic010G000700--Sobic004G150400 Sobic003G248500 Sobic003G248500 Sobic010G000700--Sobic003G248500 Sobic008G034600 Sobic008G034600 Sobic010G000700--Sobic008G034600 Sobic006G109300 Sobic006G109300 Sobic010G000700--Sobic006G109300 Sobic002G061400 Sobic002G061400 Sobic010G000700--Sobic002G061400 Sobic009G094800 Sobic009G094800 Sobic002G174900--Sobic009G094800 Sobic003G368800 Sobic003G368800 Sobic002G174900--Sobic003G368800 Sobic003G308700 Sobic003G308700 Sobic002G174900--Sobic003G308700 Sobic002G040800 Sobic002G040800 Sobic002G174900--Sobic002G040800 Sobic002G174900--Sobic008G165700 Sobic002G174900--Sobic001G377000 Sobic002G174900--Sobic006G171700 Sobic007G148200 Sobic007G148200 Sobic002G174900--Sobic007G148200 Sobic002G174900--Sobic001G279200
Octagon: transcription factors


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