Gene annotation
Transcriptome id Sobic.005G007700.2,Sobic.005G007700.1
Synonym Sb05g000730
Functional annotation expressed protein
UniProt C5Y320
Pfam -
Panther DB PTHR31728
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G08780 : -
RAP-DB (Rice) LOC_Os07g35600.2,LOC_Os07g35600.1 : expressed protein
MaizeGDB (Corn) Zm00025a028941
Brachypodium KQJ92611
Barley HORVU5Hr1G047470.3 , HORVU5Hr1G047470.5 , HORVU5Hr1G047470.4 , HORVU5Hr1G047470.6
Wheat TraesCS5A02G151000 , TraesCS5D02G156000 , TraesCS5B02G149500
Populus -


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cDNA sequences
Sobic.005G007700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G222900 RNA recognition motif containing protein, putative, expressed K14411: RNA-binding protein Musashi
2 Sobic.010G137400 cysteine-rich receptor-like protein kinase 10 precursor, putative, expressed -
3 Sobic.007G112900 - -
4 Sobic.010G143200 - -
5 Sobic.008G165100 G-patch domain containing protein, putative, expressed K13103: tuftelin-interacting protein 11
6 Sobic.010G269600 RNA recognition motif containing protein, expressed K12897: transformer-2 protein
7 Sobic.003G159450 - -
8 Sobic.005G229000 Putative splicing factor(PubMedID : 24356560)@RNA recognition motif containing protein, expressed K12900: FUS-interacting serine-arginine-rich protein 1
9 Sobic.010G000700 zinc finger, C3HC4 type domain containing protein, expressed K11982: E3 ubiquitin-protein ligase RNF115/126
10 Sobic.001G063100 DUF593 domain containing protein, expressed -
11 Sobic.002G212800 - -
12 Sobic.004G291800 - -
13 Sobic.007G210300 G-patch domain containing protein, expressed -
14 Sobic.007G096401 - -
15 Sobic.002G095700 C2-BTB1 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with C2 subfamily conserved sequence, expressed K10523: speckle-type POZ protein
16 Sobic.001G151900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@DUF593 domain containing protein, expressed -
17 Sobic.002G061400 OsFBX237 - F-box domain containing protein, expressed -
18 Sobic.002G095900 - -
19 Sobic.009G042400 OsFBX159 - F-box domain containing protein, expressed -
20 Sobic.007G002900 C3-BTB1 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with C3 subfamily conserved sequence, expressed K10523: speckle-type POZ protein


Gene co-expression network
sample Sobic005G007700 Sobic005G007700 Sobic001G222900 Sobic001G222900 Sobic005G007700--Sobic001G222900 Sobic010G137400 Sobic010G137400 Sobic005G007700--Sobic010G137400 Sobic007G112900 Sobic007G112900 Sobic005G007700--Sobic007G112900 Sobic010G143200 Sobic010G143200 Sobic005G007700--Sobic010G143200 Sobic008G165100 Sobic008G165100 Sobic005G007700--Sobic008G165100 Sobic010G269600 Sobic010G269600 Sobic005G007700--Sobic010G269600 Sobic003G159450 Sobic003G159450 Sobic005G007700--Sobic003G159450 Sobic005G229000 Sobic005G229000 Sobic005G007700--Sobic005G229000 Sobic010G000700 Sobic010G000700 Sobic005G007700--Sobic010G000700 Sobic001G108900 Sobic001G108900 Sobic001G222900--Sobic001G108900 Sobic003G123000 Sobic003G123000 Sobic001G222900--Sobic003G123000 Sobic001G222900--Sobic005G007700 Sobic004G246700 Sobic004G246700 Sobic001G222900--Sobic004G246700 Sobic005G079800 Sobic005G079800 Sobic001G222900--Sobic005G079800 Sobic001G222900--Sobic008G165100 Sobic002G309800 Sobic002G309800 Sobic001G222900--Sobic002G309800 Sobic002G224700 Sobic002G224700 Sobic001G222900--Sobic002G224700 Sobic004G095300 Sobic004G095300 Sobic001G222900--Sobic004G095300 Sobic010G137400--Sobic005G007700 Sobic002G095900 Sobic002G095900 Sobic010G137400--Sobic002G095900 Sobic003G020600 Sobic003G020600 Sobic010G137400--Sobic003G020600 Sobic004G289600 Sobic004G289600 Sobic010G137400--Sobic004G289600 Sobic010G137400--Sobic003G159450 Sobic010G137400--Sobic010G000700 Sobic004G291800 Sobic004G291800 Sobic010G137400--Sobic004G291800 Sobic008G012900 Sobic008G012900 Sobic010G137400--Sobic008G012900 Sobic002G164400 Sobic002G164400 Sobic010G137400--Sobic002G164400 Sobic002G212800 Sobic002G212800 Sobic007G112900--Sobic002G212800 Sobic007G112900--Sobic003G159450 Sobic007G112900--Sobic010G143200 Sobic007G112900--Sobic004G291800 Sobic006G046000 Sobic006G046000 Sobic007G112900--Sobic006G046000 Sobic001G394400 Sobic001G394400 Sobic007G112900--Sobic001G394400 Sobic008G091671 Sobic008G091671 Sobic007G112900--Sobic008G091671 Sobic008G125600 Sobic008G125600 Sobic007G112900--Sobic008G125600 Sobic009G104300 Sobic009G104300 Sobic007G112900--Sobic009G104300 Sobic010G143200--Sobic007G112900 Sobic010G143200--Sobic003G159450 Sobic001G261496 Sobic001G261496 Sobic010G143200--Sobic001G261496 Sobic001G191100 Sobic001G191100 Sobic010G143200--Sobic001G191100 Sobic008G000900 Sobic008G000900 Sobic010G143200--Sobic008G000900 Sobic004G096500 Sobic004G096500 Sobic010G143200--Sobic004G096500 Sobic010G143200--Sobic008G125600 Sobic010G143200--Sobic008G091671 Sobic009G178800 Sobic009G178800 Sobic010G143200--Sobic009G178800 Sobic002G067800 Sobic002G067800 Sobic008G165100--Sobic002G067800 Sobic010G194700 Sobic010G194700 Sobic008G165100--Sobic010G194700 Sobic008G073000 Sobic008G073000 Sobic008G165100--Sobic008G073000 Sobic005G030300 Sobic005G030300 Sobic008G165100--Sobic005G030300 Sobic002G095700 Sobic002G095700 Sobic008G165100--Sobic002G095700 Sobic006G123900 Sobic006G123900 Sobic008G165100--Sobic006G123900 Sobic002G151600 Sobic002G151600 Sobic008G165100--Sobic002G151600 Sobic003G433500 Sobic003G433500 Sobic008G165100--Sobic003G433500 Sobic002G045400 Sobic002G045400 Sobic008G165100--Sobic002G045400 Sobic010G269600--Sobic005G229000 Sobic010G269600--Sobic010G000700 Sobic003G074000 Sobic003G074000 Sobic010G269600--Sobic003G074000 Sobic010G269600--Sobic002G045400 Sobic003G248500 Sobic003G248500 Sobic010G269600--Sobic003G248500 Sobic003G359300 Sobic003G359300 Sobic010G269600--Sobic003G359300 Sobic010G202600 Sobic010G202600 Sobic010G269600--Sobic010G202600 Sobic010G174800 Sobic010G174800 Sobic010G269600--Sobic010G174800 Sobic002G362300 Sobic002G362300 Sobic010G269600--Sobic002G362300 Sobic003G159450--Sobic007G112900 Sobic003G159450--Sobic010G143200 Sobic003G159450--Sobic002G212800 Sobic003G159450--Sobic008G125600 Sobic003G159450--Sobic008G091671 Sobic009G067501 Sobic009G067501 Sobic003G159450--Sobic009G067501 Sobic003G159450--Sobic004G291800 Sobic003G159450--Sobic002G095900 Sobic003G159450--Sobic005G007700 Sobic005G229000--Sobic010G269600 Sobic004G077000 Sobic004G077000 Sobic005G229000--Sobic004G077000 Sobic005G229000--Sobic002G362300 Sobic009G044900 Sobic009G044900 Sobic005G229000--Sobic009G044900 Sobic005G229000--Sobic003G074000 Sobic005G009200 Sobic005G009200 Sobic005G229000--Sobic005G009200 Sobic004G211400 Sobic004G211400 Sobic005G229000--Sobic004G211400 Sobic002G157200 Sobic002G157200 Sobic005G229000--Sobic002G157200 Sobic007G130300 Sobic007G130300 Sobic005G229000--Sobic007G130300 Sobic010G000700--Sobic010G269600 Sobic003G185200 Sobic003G185200 Sobic010G000700--Sobic003G185200 Sobic002G365100 Sobic002G365100 Sobic010G000700--Sobic002G365100 Sobic010G055500 Sobic010G055500 Sobic010G000700--Sobic010G055500 Sobic004G150400 Sobic004G150400 Sobic010G000700--Sobic004G150400 Sobic010G000700--Sobic003G248500 Sobic008G034600 Sobic008G034600 Sobic010G000700--Sobic008G034600 Sobic006G109300 Sobic006G109300 Sobic010G000700--Sobic006G109300 Sobic002G061400 Sobic002G061400 Sobic010G000700--Sobic002G061400
Octagon: transcription factors


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