Gene annotation
Transcriptome id Sobic.007G002900.1
Synonym Sb07g000460
Functional annotation C3-BTB1 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with C3 subfamily conserved sequence, expressed
UniProt C5YLE4
Pfam PF00651
Panther DB PTHR24413 PTHR24413:SF85
NCBI CDD -
KEGG Orthology K10523; speckle-type POZ protein
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT1G21780 : BTB/POZ domain-containing protein
RAP-DB (Rice) LOC_Os08g01320.2 : C3-BTB1 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with C3 subfamily conserved sequence, expressed
MaizeGDB (Corn) Zm00025a033673
Brachypodium KQJ94777
Barley HORVU7Hr1G077930.13 , HORVU7Hr1G077930.12 , HORVU7Hr1G077930.11 , HORVU7Hr1G077930.10 , HORVU7Hr1G077930.9 , HORVU7Hr1G077930.7
Wheat TraesCS7B02G226700 , TraesCS7D02G322800 , TraesCS7D02G322800 , TraesCS7A02G326100
Populus -


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cDNA sequences
Sobic.007G002900


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G309800 casein kinase II subunit beta-4, putative, expressed K03115: casein kinase II subunit beta
2 Sobic.009G070100 expressed protein -
3 Sobic.008G136200 spotted leaf 11, putative, expressed -
4 Sobic.006G191400 - -
5 Sobic.007G052900 acetyltransferase, GNAT family, putative, expressed -
6 Sobic.001G039600 U-box domain-containing protein, putative, expressed -
7 Sobic.008G165100 G-patch domain containing protein, putative, expressed K13103: tuftelin-interacting protein 11
8 Sobic.003G197800 peptidyl-prolyl cis-trans isomerase, putative, expressed K12737: peptidyl-prolyl cis-trans isomerase SDCCAG10
9 Sobic.010G056200 WD-40 repeat family protein, putative, expressed -
10 Sobic.002G151600 R-interacting factor 1, putative, expressed -
11 Sobic.002G329300 basic helix-loop-helix DND-binding domain containing protein, expressed -
12 Sobic.003G136800 SNF7 domain containing protein, putative, expressed K15053: charged multivesicular body protein 7
13 Sobic.004G113800 CAPIP1, putative, expressed K14496: abscisic acid receptor PYR/PYL family
14 Sobic.004G211400 Putative splicing factor(PubMedID : 24356560)@splicing factor, arginine/serine-rich 7, putative, expressed K12896: splicing factor, arginine/serine-rich 7
15 Sobic.010G068400 Putative splicing factor(PubMedID : 24356560)@RNA recognition motif containing protein, expressed K12896: splicing factor, arginine/serine-rich 7
16 Sobic.005G079800 transcriptional corepressor SEUSS, putative, expressed -
17 Sobic.005G063700 OsFBW2 - F-box domain and WD40 repeat containing protein, expressed -
18 Sobic.001G420000 expressed protein -
19 Sobic.001G252500 expressed protein -
20 Sobic.008G152800 Cellular calcium signals(PubMedID : 19860013)@calcineurin B, putative, expressed K06268: PPP3R, serine/threonine-protein phosphatase 2B regulatory subunit


Gene co-expression network
sample Sobic007G002900 Sobic007G002900 Sobic002G309800 Sobic002G309800 Sobic007G002900--Sobic002G309800 Sobic009G070100 Sobic009G070100 Sobic007G002900--Sobic009G070100 Sobic008G136200 Sobic008G136200 Sobic007G002900--Sobic008G136200 Sobic006G191400 Sobic006G191400 Sobic007G002900--Sobic006G191400 Sobic007G052900 Sobic007G052900 Sobic007G002900--Sobic007G052900 Sobic001G039600 Sobic001G039600 Sobic007G002900--Sobic001G039600 Sobic008G165100 Sobic008G165100 Sobic007G002900--Sobic008G165100 Sobic003G197800 Sobic003G197800 Sobic007G002900--Sobic003G197800 Sobic010G056200 Sobic010G056200 Sobic007G002900--Sobic010G056200 Sobic009G065100 Sobic009G065100 Sobic002G309800--Sobic009G065100 Sobic001G253200 Sobic001G253200 Sobic002G309800--Sobic001G253200 Sobic002G309800--Sobic010G056200 Sobic007G054400 Sobic007G054400 Sobic002G309800--Sobic007G054400 Sobic009G215800 Sobic009G215800 Sobic002G309800--Sobic009G215800 Sobic005G079800 Sobic005G079800 Sobic002G309800--Sobic005G079800 Sobic002G309800--Sobic009G070100 Sobic007G078600 Sobic007G078600 Sobic002G309800--Sobic007G078600 Sobic004G087600 Sobic004G087600 Sobic002G309800--Sobic004G087600 Sobic009G070100--Sobic002G309800 Sobic009G070100--Sobic007G002900 Sobic002G156200 Sobic002G156200 Sobic009G070100--Sobic002G156200 Sobic007G095500 Sobic007G095500 Sobic009G070100--Sobic007G095500 Sobic002G122600 Sobic002G122600 Sobic009G070100--Sobic002G122600 Sobic006G252300 Sobic006G252300 Sobic009G070100--Sobic006G252300 Sobic009G070100--Sobic010G056200 Sobic001G375700 Sobic001G375700 Sobic009G070100--Sobic001G375700 Sobic001G107500 Sobic001G107500 Sobic009G070100--Sobic001G107500 Sobic002G144933 Sobic002G144933 Sobic008G136200--Sobic002G144933 Sobic007G205800 Sobic007G205800 Sobic008G136200--Sobic007G205800 Sobic007G011400 Sobic007G011400 Sobic008G136200--Sobic007G011400 Sobic008G136200--Sobic009G215800 Sobic008G136200--Sobic009G065100 Sobic001G094000 Sobic001G094000 Sobic008G136200--Sobic001G094000 Sobic002G157000 Sobic002G157000 Sobic008G136200--Sobic002G157000 Sobic008G136200--Sobic003G197800 Sobic009G087800 Sobic009G087800 Sobic008G136200--Sobic009G087800 Sobic002G330400 Sobic002G330400 Sobic006G191400--Sobic002G330400 Sobic001G303675 Sobic001G303675 Sobic006G191400--Sobic001G303675 Sobic004G211400 Sobic004G211400 Sobic006G191400--Sobic004G211400 Sobic003G163100 Sobic003G163100 Sobic006G191400--Sobic003G163100 Sobic002G209600 Sobic002G209600 Sobic006G191400--Sobic002G209600 Sobic006G191400--Sobic008G136200 Sobic002G151600 Sobic002G151600 Sobic006G191400--Sobic002G151600 Sobic009G045700 Sobic009G045700 Sobic006G191400--Sobic009G045700 Sobic006G191400--Sobic007G052900 Sobic007G052900--Sobic010G056200 Sobic004G113800 Sobic004G113800 Sobic007G052900--Sobic004G113800 Sobic007G052900--Sobic002G209600 Sobic010G005600 Sobic010G005600 Sobic007G052900--Sobic010G005600 Sobic004G083700 Sobic004G083700 Sobic007G052900--Sobic004G083700 Sobic007G054000 Sobic007G054000 Sobic007G052900--Sobic007G054000 Sobic010G280100 Sobic010G280100 Sobic007G052900--Sobic010G280100 Sobic006G180432 Sobic006G180432 Sobic007G052900--Sobic006G180432 Sobic007G052900--Sobic009G065100 Sobic001G473600 Sobic001G473600 Sobic001G039600--Sobic001G473600 Sobic007G041300 Sobic007G041300 Sobic001G039600--Sobic007G041300 Sobic001G039600--Sobic005G079800 Sobic003G438900 Sobic003G438900 Sobic001G039600--Sobic003G438900 Sobic007G191700 Sobic007G191700 Sobic001G039600--Sobic007G191700 Sobic001G039600--Sobic002G309800 Sobic001G039600--Sobic007G002900 Sobic009G000500 Sobic009G000500 Sobic001G039600--Sobic009G000500 Sobic003G266001 Sobic003G266001 Sobic001G039600--Sobic003G266001 Sobic002G067800 Sobic002G067800 Sobic008G165100--Sobic002G067800 Sobic010G194700 Sobic010G194700 Sobic008G165100--Sobic010G194700 Sobic008G073000 Sobic008G073000 Sobic008G165100--Sobic008G073000 Sobic005G030300 Sobic005G030300 Sobic008G165100--Sobic005G030300 Sobic002G095700 Sobic002G095700 Sobic008G165100--Sobic002G095700 Sobic006G123900 Sobic006G123900 Sobic008G165100--Sobic006G123900 Sobic008G165100--Sobic002G151600 Sobic003G433500 Sobic003G433500 Sobic008G165100--Sobic003G433500 Sobic002G045400 Sobic002G045400 Sobic008G165100--Sobic002G045400 Sobic003G197800--Sobic002G157000 Sobic002G320500 Sobic002G320500 Sobic003G197800--Sobic002G320500 Sobic002G186000 Sobic002G186000 Sobic003G197800--Sobic002G186000 Sobic003G197800--Sobic002G151600 Sobic006G133800 Sobic006G133800 Sobic003G197800--Sobic006G133800 Sobic003G197800--Sobic009G065100 Sobic003G173950 Sobic003G173950 Sobic003G197800--Sobic003G173950 Sobic002G248400 Sobic002G248400 Sobic003G197800--Sobic002G248400 Sobic001G206100 Sobic001G206100 Sobic003G197800--Sobic001G206100 Sobic010G056200--Sobic001G107500 Sobic010G056200--Sobic004G113800 Sobic010G056200--Sobic004G083700 Sobic010G056200--Sobic007G052900 Sobic003G324000 Sobic003G324000 Sobic010G056200--Sobic003G324000 Sobic010G056200--Sobic009G065100 Sobic006G228500 Sobic006G228500 Sobic010G056200--Sobic006G228500 Sobic010G056200--Sobic002G309800 Sobic009G157200 Sobic009G157200 Sobic010G056200--Sobic009G157200
Octagon: transcription factors


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