Gene annotation
Transcriptome id Sobic.009G042400.1
Synonym Sb09g003560
Functional annotation OsFBX159 - F-box domain containing protein, expressed
UniProt C5Z014
Pfam -
Panther DB PTHR33207 PTHR33207:SF10
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os05g05500.1 : OsFBX159 - F-box domain containing protein, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat TraesCS1D02G092800
Populus -


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cDNA sequences
Sobic.009G042400


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G294100 ICE-like protease p20 domain containing protein, expressed -
2 Sobic.002G197100 RAD23 DNA repair protein, putative, expressed K10839: RAD23, UV excision repair protein RAD23
3 Sobic.002G224700 NFKB, putative, expressed -
4 Sobic.008G127400 OsFBX252 - F-box domain containing protein, expressed -
5 Sobic.004G246700 zinc finger family protein, putative, expressed -
6 Sobic.010G033400 splicing factor, putative, expressed K12850: pre-mRNA-splicing factor 38B
7 Sobic.008G073000 expressed protein -
8 Sobic.007G027700 expressed protein -
9 Sobic.006G267300 expressed protein -
10 Sobic.003G248500 WD domain, G-beta repeat domain containing protein, expressed -
11 Sobic.007G111100 PSF3 - Putative GINS complex subunit, expressed K10734: GINS complex subunit 3
12 Sobic.006G248500 expressed protein -
13 Sobic.010G000700 zinc finger, C3HC4 type domain containing protein, expressed K11982: E3 ubiquitin-protein ligase RNF115/126
14 Sobic.010G202600 zinc finger, C3HC4 type domain containing protein, expressed K10661: MARCH6, E3 ubiquitin-protein ligase MARCH6
15 Sobic.004G007300 expressed protein -
16 Sobic.002G045400 MBTB13 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed K10523: speckle-type POZ protein
17 Sobic.010G269600 RNA recognition motif containing protein, expressed K12897: transformer-2 protein
18 Sobic.001G390500 SNF1-related protein kinase regulatory subunit beta-1, putative, expressed K07199: 5'-AMP-activated protein kinase, regulatory beta subunit
19 Sobic.001G469800 transcription initiation factor IIB, putative, expressed K03124: TFIIB, GTF2B, SUA7, transcription initiation factor TFIIB
20 Sobic.001G016000 expressed protein K07759: poly(ADP-ribose) glycohydrolase


Gene co-expression network
sample Sobic009G042400 Sobic009G042400 Sobic001G294100 Sobic001G294100 Sobic009G042400--Sobic001G294100 Sobic002G197100 Sobic002G197100 Sobic009G042400--Sobic002G197100 Sobic002G224700 Sobic002G224700 Sobic009G042400--Sobic002G224700 Sobic008G127400 Sobic008G127400 Sobic009G042400--Sobic008G127400 Sobic004G246700 Sobic004G246700 Sobic009G042400--Sobic004G246700 Sobic010G033400 Sobic010G033400 Sobic009G042400--Sobic010G033400 Sobic008G073000 Sobic008G073000 Sobic009G042400--Sobic008G073000 Sobic007G027700 Sobic007G027700 Sobic009G042400--Sobic007G027700 Sobic006G267300 Sobic006G267300 Sobic009G042400--Sobic006G267300 Sobic003G185200 Sobic003G185200 Sobic001G294100--Sobic003G185200 Sobic001G294100--Sobic009G042400 Sobic010G000700 Sobic010G000700 Sobic001G294100--Sobic010G000700 Sobic010G202600 Sobic010G202600 Sobic001G294100--Sobic010G202600 Sobic001G294100--Sobic004G246700 Sobic001G294100--Sobic002G197100 Sobic001G425000 Sobic001G425000 Sobic001G294100--Sobic001G425000 Sobic003G442000 Sobic003G442000 Sobic001G294100--Sobic003G442000 Sobic005G025300 Sobic005G025300 Sobic001G294100--Sobic005G025300 Sobic004G007300 Sobic004G007300 Sobic002G197100--Sobic004G007300 Sobic006G173100 Sobic006G173100 Sobic002G197100--Sobic006G173100 Sobic004G345700 Sobic004G345700 Sobic002G197100--Sobic004G345700 Sobic001G176200 Sobic001G176200 Sobic002G197100--Sobic001G176200 Sobic001G090400 Sobic001G090400 Sobic002G197100--Sobic001G090400 Sobic002G197100--Sobic001G425000 Sobic003G248500 Sobic003G248500 Sobic002G197100--Sobic003G248500 Sobic001G514000 Sobic001G514000 Sobic002G197100--Sobic001G514000 Sobic002G370900 Sobic002G370900 Sobic002G197100--Sobic002G370900 Sobic006G248500 Sobic006G248500 Sobic002G224700--Sobic006G248500 Sobic002G224700--Sobic008G127400 Sobic002G224700--Sobic007G027700 Sobic001G029400 Sobic001G029400 Sobic002G224700--Sobic001G029400 Sobic002G224700--Sobic004G246700 Sobic007G111100 Sobic007G111100 Sobic002G224700--Sobic007G111100 Sobic002G058300 Sobic002G058300 Sobic002G224700--Sobic002G058300 Sobic001G143500 Sobic001G143500 Sobic002G224700--Sobic001G143500 Sobic006G065800 Sobic006G065800 Sobic002G224700--Sobic006G065800 Sobic008G127400--Sobic007G027700 Sobic008G127400--Sobic006G267300 Sobic003G205501 Sobic003G205501 Sobic008G127400--Sobic003G205501 Sobic008G127400--Sobic006G065800 Sobic008G127400--Sobic004G246700 Sobic008G058800 Sobic008G058800 Sobic008G127400--Sobic008G058800 Sobic002G423200 Sobic002G423200 Sobic008G127400--Sobic002G423200 Sobic008G127400--Sobic006G248500 Sobic008G127400--Sobic010G033400 Sobic004G349900 Sobic004G349900 Sobic004G246700--Sobic004G349900 Sobic002G365100 Sobic002G365100 Sobic004G246700--Sobic002G365100 Sobic002G259800 Sobic002G259800 Sobic004G246700--Sobic002G259800 Sobic004G246700--Sobic008G127400 Sobic003G241200 Sobic003G241200 Sobic004G246700--Sobic003G241200 Sobic004G246700--Sobic010G202600 Sobic004G096500 Sobic004G096500 Sobic004G246700--Sobic004G096500 Sobic002G320500 Sobic002G320500 Sobic004G246700--Sobic002G320500 Sobic002G034600 Sobic002G034600 Sobic004G246700--Sobic002G034600 Sobic007G118200 Sobic007G118200 Sobic010G033400--Sobic007G118200 Sobic008G174300 Sobic008G174300 Sobic010G033400--Sobic008G174300 Sobic009G198100 Sobic009G198100 Sobic010G033400--Sobic009G198100 Sobic004G350100 Sobic004G350100 Sobic010G033400--Sobic004G350100 Sobic001G028400 Sobic001G028400 Sobic010G033400--Sobic001G028400 Sobic010G260500 Sobic010G260500 Sobic010G033400--Sobic010G260500 Sobic003G359300 Sobic003G359300 Sobic010G033400--Sobic003G359300 Sobic003G081000 Sobic003G081000 Sobic010G033400--Sobic003G081000 Sobic001G131800 Sobic001G131800 Sobic010G033400--Sobic001G131800 Sobic005G030300 Sobic005G030300 Sobic008G073000--Sobic005G030300 Sobic002G045400 Sobic002G045400 Sobic008G073000--Sobic002G045400 Sobic002G095700 Sobic002G095700 Sobic008G073000--Sobic002G095700 Sobic008G101800 Sobic008G101800 Sobic008G073000--Sobic008G101800 Sobic001G202266 Sobic001G202266 Sobic008G073000--Sobic001G202266 Sobic006G278200 Sobic006G278200 Sobic008G073000--Sobic006G278200 Sobic008G165100 Sobic008G165100 Sobic008G073000--Sobic008G165100 Sobic010G174800 Sobic010G174800 Sobic008G073000--Sobic010G174800 Sobic002G067800 Sobic002G067800 Sobic008G073000--Sobic002G067800 Sobic007G027700--Sobic008G127400 Sobic003G401100 Sobic003G401100 Sobic007G027700--Sobic003G401100 Sobic003G412300 Sobic003G412300 Sobic007G027700--Sobic003G412300 Sobic007G027700--Sobic001G143500 Sobic004G325400 Sobic004G325400 Sobic007G027700--Sobic004G325400 Sobic005G216300 Sobic005G216300 Sobic007G027700--Sobic005G216300 Sobic001G395100 Sobic001G395100 Sobic007G027700--Sobic001G395100 Sobic010G279900 Sobic010G279900 Sobic007G027700--Sobic010G279900 Sobic007G027700--Sobic006G267300 Sobic006G267300--Sobic007G111100 Sobic009G257800 Sobic009G257800 Sobic006G267300--Sobic009G257800 Sobic006G267300--Sobic003G205501 Sobic001G408700 Sobic001G408700 Sobic006G267300--Sobic001G408700 Sobic009G195200 Sobic009G195200 Sobic006G267300--Sobic009G195200 Sobic006G267300--Sobic007G118200 Sobic006G267300--Sobic010G202600 Sobic003G433500 Sobic003G433500 Sobic006G267300--Sobic003G433500 Sobic006G267300--Sobic008G127400
Octagon: transcription factors


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