Gene annotation
Transcriptome id Sobic.002G224700.1
Synonym Sb02g026540
Functional annotation NFKB, putative, expressed
UniProt A0A1B6QCW3
Pfam PF06047
Panther DB PTHR13087
NCBI CDD KOG2812; Uncharacterized conserved protein
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G02720 : -
RAP-DB (Rice) LOC_Os09g28220.1 : NFKB, putative, expressed
MaizeGDB (Corn) Zm00025a047243
Brachypodium KQJ90507
Barley HORVU5Hr1G068130.4 , HORVU5Hr1G068130.1 , HORVU5Hr1G068130.3 , HORVU5Hr1G068130.2 , HORVU5Hr1G068120.2 , HORVU5Hr1G068120.3 , HORVU5Hr1G068120.1
Wheat -
Populus PNT47914


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cDNA sequences
Sobic.002G224700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G248500 expressed protein -
2 Sobic.008G127400 OsFBX252 - F-box domain containing protein, expressed -
3 Sobic.007G027700 expressed protein -
4 Sobic.001G029400 RNA-binding motif protein, putative, expressed K13107: RBMX2, RNA-binding motif protein, X-linked 2
5 Sobic.004G246700 zinc finger family protein, putative, expressed -
6 Sobic.007G111100 PSF3 - Putative GINS complex subunit, expressed K10734: GINS complex subunit 3
7 Sobic.002G058300 ES43 protein, putative, expressed -
8 Sobic.001G143500 pleckstrin homology domain-containing protein, putative, expressed -
9 Sobic.006G065800 Trihelix Family(PubMedID : 24864043)@amino acid kinase, putative, expressed -
10 Sobic.001G469800 transcription initiation factor IIB, putative, expressed K03124: TFIIB, GTF2B, SUA7, transcription initiation factor TFIIB
11 Sobic.001G395100 - K12835: DDX42, ATP-dependent RNA helicase DDX42
12 Sobic.002G089900 OsFBX237 - F-box domain containing protein, expressed -
13 Sobic.010G028300 bromodomain domain containing protein, expressed -
14 Sobic.007G086500 expressed protein K16584: HAUS augmin-like complex subunit 1
15 Sobic.007G009400 bromodomain domain containing protein, expressed -
16 Sobic.010G202600 zinc finger, C3HC4 type domain containing protein, expressed K10661: MARCH6, E3 ubiquitin-protein ligase MARCH6
17 Sobic.009G044900 serine/threonine-protein phosphatase 2A regulatory subunit B subunitgamma, putative, expressed K11583: serine/threonine-protein phosphatase 2A regulatory subunit B''
18 Sobic.003G115100 importin subunit alpha, putative, expressed -
19 Sobic.009G056300 PHD finger protein, putative, expressed -
20 Sobic.005G009200 expressed protein -


Gene co-expression network
sample Sobic002G224700 Sobic002G224700 Sobic006G248500 Sobic006G248500 Sobic002G224700--Sobic006G248500 Sobic008G127400 Sobic008G127400 Sobic002G224700--Sobic008G127400 Sobic007G027700 Sobic007G027700 Sobic002G224700--Sobic007G027700 Sobic001G029400 Sobic001G029400 Sobic002G224700--Sobic001G029400 Sobic004G246700 Sobic004G246700 Sobic002G224700--Sobic004G246700 Sobic007G111100 Sobic007G111100 Sobic002G224700--Sobic007G111100 Sobic002G058300 Sobic002G058300 Sobic002G224700--Sobic002G058300 Sobic001G143500 Sobic001G143500 Sobic002G224700--Sobic001G143500 Sobic006G065800 Sobic006G065800 Sobic002G224700--Sobic006G065800 Sobic001G469800 Sobic001G469800 Sobic006G248500--Sobic001G469800 Sobic002G259800 Sobic002G259800 Sobic006G248500--Sobic002G259800 Sobic003G433500 Sobic003G433500 Sobic006G248500--Sobic003G433500 Sobic009G151200 Sobic009G151200 Sobic006G248500--Sobic009G151200 Sobic008G058800 Sobic008G058800 Sobic006G248500--Sobic008G058800 Sobic004G013600 Sobic004G013600 Sobic006G248500--Sobic004G013600 Sobic007G026000 Sobic007G026000 Sobic006G248500--Sobic007G026000 Sobic004G347100 Sobic004G347100 Sobic006G248500--Sobic004G347100 Sobic009G044900 Sobic009G044900 Sobic006G248500--Sobic009G044900 Sobic008G127400--Sobic007G027700 Sobic006G267300 Sobic006G267300 Sobic008G127400--Sobic006G267300 Sobic003G205501 Sobic003G205501 Sobic008G127400--Sobic003G205501 Sobic008G127400--Sobic006G065800 Sobic008G127400--Sobic004G246700 Sobic008G127400--Sobic008G058800 Sobic002G423200 Sobic002G423200 Sobic008G127400--Sobic002G423200 Sobic008G127400--Sobic006G248500 Sobic010G033400 Sobic010G033400 Sobic008G127400--Sobic010G033400 Sobic007G027700--Sobic008G127400 Sobic003G401100 Sobic003G401100 Sobic007G027700--Sobic003G401100 Sobic003G412300 Sobic003G412300 Sobic007G027700--Sobic003G412300 Sobic007G027700--Sobic001G143500 Sobic004G325400 Sobic004G325400 Sobic007G027700--Sobic004G325400 Sobic005G216300 Sobic005G216300 Sobic007G027700--Sobic005G216300 Sobic001G395100 Sobic001G395100 Sobic007G027700--Sobic001G395100 Sobic010G279900 Sobic010G279900 Sobic007G027700--Sobic010G279900 Sobic007G027700--Sobic006G267300 Sobic001G029400--Sobic002G224700 Sobic001G515100 Sobic001G515100 Sobic001G029400--Sobic001G515100 Sobic001G029400--Sobic003G401100 Sobic001G029400--Sobic007G111100 Sobic001G029400--Sobic001G143500 Sobic010G028300 Sobic010G028300 Sobic001G029400--Sobic010G028300 Sobic003G442000 Sobic003G442000 Sobic001G029400--Sobic003G442000 Sobic002G262700 Sobic002G262700 Sobic001G029400--Sobic002G262700 Sobic007G009400 Sobic007G009400 Sobic001G029400--Sobic007G009400 Sobic004G349900 Sobic004G349900 Sobic004G246700--Sobic004G349900 Sobic002G365100 Sobic002G365100 Sobic004G246700--Sobic002G365100 Sobic004G246700--Sobic002G259800 Sobic004G246700--Sobic008G127400 Sobic003G241200 Sobic003G241200 Sobic004G246700--Sobic003G241200 Sobic010G202600 Sobic010G202600 Sobic004G246700--Sobic010G202600 Sobic004G096500 Sobic004G096500 Sobic004G246700--Sobic004G096500 Sobic002G320500 Sobic002G320500 Sobic004G246700--Sobic002G320500 Sobic002G034600 Sobic002G034600 Sobic004G246700--Sobic002G034600 Sobic007G111100--Sobic010G202600 Sobic007G111100--Sobic002G262700 Sobic007G111100--Sobic006G267300 Sobic007G111100--Sobic001G143500 Sobic001G390500 Sobic001G390500 Sobic007G111100--Sobic001G390500 Sobic004G283000 Sobic004G283000 Sobic007G111100--Sobic004G283000 Sobic004G068500 Sobic004G068500 Sobic007G111100--Sobic004G068500 Sobic001G131800 Sobic001G131800 Sobic007G111100--Sobic001G131800 Sobic007G111100--Sobic003G205501 Sobic003G359300 Sobic003G359300 Sobic002G058300--Sobic003G359300 Sobic007G086500 Sobic007G086500 Sobic002G058300--Sobic007G086500 Sobic002G186000 Sobic002G186000 Sobic002G058300--Sobic002G186000 Sobic001G010600 Sobic001G010600 Sobic002G058300--Sobic001G010600 Sobic003G197800 Sobic003G197800 Sobic002G058300--Sobic003G197800 Sobic009G198100 Sobic009G198100 Sobic002G058300--Sobic009G198100 Sobic002G058300--Sobic010G033400 Sobic002G058300--Sobic006G267300 Sobic007G205000 Sobic007G205000 Sobic002G058300--Sobic007G205000 Sobic006G252700 Sobic006G252700 Sobic001G143500--Sobic006G252700 Sobic001G143500--Sobic007G111100 Sobic002G313500 Sobic002G313500 Sobic001G143500--Sobic002G313500 Sobic004G350100 Sobic004G350100 Sobic001G143500--Sobic004G350100 Sobic001G143500--Sobic003G401100 Sobic003G439800 Sobic003G439800 Sobic001G143500--Sobic003G439800 Sobic001G466700 Sobic001G466700 Sobic001G143500--Sobic001G466700 Sobic006G278700 Sobic006G278700 Sobic001G143500--Sobic006G278700 Sobic001G143500--Sobic006G267300 Sobic006G065800--Sobic008G127400 Sobic006G065800--Sobic001G469800 Sobic006G065800--Sobic007G111100 Sobic002G180000 Sobic002G180000 Sobic006G065800--Sobic002G180000 Sobic006G065800--Sobic006G267300 Sobic002G388200 Sobic002G388200 Sobic006G065800--Sobic002G388200 Sobic006G065800--Sobic007G009400 Sobic006G065800--Sobic007G027700 Sobic006G065800--Sobic002G224700
Octagon: transcription factors


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