Gene annotation
Transcriptome id Sobic.008G127400.2
Synonym Sb08g017870
Functional annotation OsFBX252 - F-box domain containing protein, expressed
UniProt A0A1Z5R7G4
Pfam PF12937
Panther DB PTHR31264 PTHR31264:SF11
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os07g36870.1 : OsFBX252 - F-box domain containing protein, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat TraesCS2D02G104100 , TraesCS2B02G121400 , TraesCS2B02G121400
Populus -


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cDNA sequences
Sobic.008G127400


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G027700 expressed protein -
2 Sobic.006G267300 expressed protein -
3 Sobic.003G205501 - -
4 Sobic.006G065800 Trihelix Family(PubMedID : 24864043)@amino acid kinase, putative, expressed -
5 Sobic.004G246700 zinc finger family protein, putative, expressed -
6 Sobic.008G058800 OsFBX369 - F-box domain containing protein, expressed -
7 Sobic.002G423200 importin subunit alpha-1b, putative, expressed -
8 Sobic.006G248500 expressed protein -
9 Sobic.010G033400 splicing factor, putative, expressed K12850: pre-mRNA-splicing factor 38B
10 Sobic.001G469800 transcription initiation factor IIB, putative, expressed K03124: TFIIB, GTF2B, SUA7, transcription initiation factor TFIIB
11 Sobic.002G224700 NFKB, putative, expressed -
12 Sobic.001G143500 pleckstrin homology domain-containing protein, putative, expressed -
13 Sobic.007G118200 RNA recognition motif containing protein, expressed K12897: transformer-2 protein
14 Sobic.007G009400 bromodomain domain containing protein, expressed -
15 Sobic.002G259800 hydroxyproline-rich glycoprotein family protein, putative, expressed -
16 Sobic.003G241200 nucampholin, putative, expressed K13100: pre-mRNA-splicing factor CWC22
17 Sobic.010G202600 zinc finger, C3HC4 type domain containing protein, expressed K10661: MARCH6, E3 ubiquitin-protein ligase MARCH6
18 Sobic.004G325400 cyclic nucleotide-gated ion channel 14, putative, expressed K05391: cyclic nucleotide gated channel, plant
19 Sobic.009G257800 sodium/calcium exchanger protein, putative, expressed K07300: chaA, Ca2+:H+ antiporter
20 Sobic.002G388200 LTV1, putative, expressed K14798: protein LTV1


Gene co-expression network
sample Sobic008G127400 Sobic008G127400 Sobic007G027700 Sobic007G027700 Sobic008G127400--Sobic007G027700 Sobic006G267300 Sobic006G267300 Sobic008G127400--Sobic006G267300 Sobic003G205501 Sobic003G205501 Sobic008G127400--Sobic003G205501 Sobic006G065800 Sobic006G065800 Sobic008G127400--Sobic006G065800 Sobic004G246700 Sobic004G246700 Sobic008G127400--Sobic004G246700 Sobic008G058800 Sobic008G058800 Sobic008G127400--Sobic008G058800 Sobic002G423200 Sobic002G423200 Sobic008G127400--Sobic002G423200 Sobic006G248500 Sobic006G248500 Sobic008G127400--Sobic006G248500 Sobic010G033400 Sobic010G033400 Sobic008G127400--Sobic010G033400 Sobic007G027700--Sobic008G127400 Sobic003G401100 Sobic003G401100 Sobic007G027700--Sobic003G401100 Sobic003G412300 Sobic003G412300 Sobic007G027700--Sobic003G412300 Sobic001G143500 Sobic001G143500 Sobic007G027700--Sobic001G143500 Sobic004G325400 Sobic004G325400 Sobic007G027700--Sobic004G325400 Sobic005G216300 Sobic005G216300 Sobic007G027700--Sobic005G216300 Sobic001G395100 Sobic001G395100 Sobic007G027700--Sobic001G395100 Sobic010G279900 Sobic010G279900 Sobic007G027700--Sobic010G279900 Sobic007G027700--Sobic006G267300 Sobic007G111100 Sobic007G111100 Sobic006G267300--Sobic007G111100 Sobic009G257800 Sobic009G257800 Sobic006G267300--Sobic009G257800 Sobic006G267300--Sobic003G205501 Sobic001G408700 Sobic001G408700 Sobic006G267300--Sobic001G408700 Sobic009G195200 Sobic009G195200 Sobic006G267300--Sobic009G195200 Sobic007G118200 Sobic007G118200 Sobic006G267300--Sobic007G118200 Sobic010G202600 Sobic010G202600 Sobic006G267300--Sobic010G202600 Sobic003G433500 Sobic003G433500 Sobic006G267300--Sobic003G433500 Sobic006G267300--Sobic008G127400 Sobic003G205501--Sobic001G408700 Sobic006G128800 Sobic006G128800 Sobic003G205501--Sobic006G128800 Sobic004G345700 Sobic004G345700 Sobic003G205501--Sobic004G345700 Sobic003G205501--Sobic006G267300 Sobic003G205501--Sobic010G202600 Sobic010G245000 Sobic010G245000 Sobic003G205501--Sobic010G245000 Sobic003G205501--Sobic008G127400 Sobic003G205501--Sobic008G058800 Sobic003G248500 Sobic003G248500 Sobic003G205501--Sobic003G248500 Sobic006G065800--Sobic008G127400 Sobic001G469800 Sobic001G469800 Sobic006G065800--Sobic001G469800 Sobic006G065800--Sobic007G111100 Sobic002G180000 Sobic002G180000 Sobic006G065800--Sobic002G180000 Sobic006G065800--Sobic006G267300 Sobic002G388200 Sobic002G388200 Sobic006G065800--Sobic002G388200 Sobic007G009400 Sobic007G009400 Sobic006G065800--Sobic007G009400 Sobic006G065800--Sobic007G027700 Sobic002G224700 Sobic002G224700 Sobic006G065800--Sobic002G224700 Sobic004G349900 Sobic004G349900 Sobic004G246700--Sobic004G349900 Sobic002G365100 Sobic002G365100 Sobic004G246700--Sobic002G365100 Sobic002G259800 Sobic002G259800 Sobic004G246700--Sobic002G259800 Sobic004G246700--Sobic008G127400 Sobic003G241200 Sobic003G241200 Sobic004G246700--Sobic003G241200 Sobic004G246700--Sobic010G202600 Sobic004G096500 Sobic004G096500 Sobic004G246700--Sobic004G096500 Sobic002G320500 Sobic002G320500 Sobic004G246700--Sobic002G320500 Sobic002G034600 Sobic002G034600 Sobic004G246700--Sobic002G034600 Sobic001G042200 Sobic001G042200 Sobic008G058800--Sobic001G042200 Sobic009G129600 Sobic009G129600 Sobic008G058800--Sobic009G129600 Sobic008G058800--Sobic006G248500 Sobic008G058800--Sobic003G205501 Sobic010G077500 Sobic010G077500 Sobic008G058800--Sobic010G077500 Sobic002G264200 Sobic002G264200 Sobic008G058800--Sobic002G264200 Sobic007G026000 Sobic007G026000 Sobic008G058800--Sobic007G026000 Sobic008G058800--Sobic008G127400 Sobic004G180900 Sobic004G180900 Sobic008G058800--Sobic004G180900 Sobic002G423200--Sobic002G259800 Sobic005G133500 Sobic005G133500 Sobic002G423200--Sobic005G133500 Sobic004G246100 Sobic004G246100 Sobic002G423200--Sobic004G246100 Sobic002G423200--Sobic006G248500 Sobic002G423200--Sobic008G127400 Sobic010G236400 Sobic010G236400 Sobic002G423200--Sobic010G236400 Sobic003G353600 Sobic003G353600 Sobic002G423200--Sobic003G353600 Sobic001G138400 Sobic001G138400 Sobic002G423200--Sobic001G138400 Sobic006G138000 Sobic006G138000 Sobic002G423200--Sobic006G138000 Sobic006G248500--Sobic001G469800 Sobic006G248500--Sobic002G259800 Sobic006G248500--Sobic003G433500 Sobic009G151200 Sobic009G151200 Sobic006G248500--Sobic009G151200 Sobic006G248500--Sobic008G058800 Sobic004G013600 Sobic004G013600 Sobic006G248500--Sobic004G013600 Sobic006G248500--Sobic007G026000 Sobic004G347100 Sobic004G347100 Sobic006G248500--Sobic004G347100 Sobic009G044900 Sobic009G044900 Sobic006G248500--Sobic009G044900 Sobic010G033400--Sobic007G118200 Sobic008G174300 Sobic008G174300 Sobic010G033400--Sobic008G174300 Sobic009G198100 Sobic009G198100 Sobic010G033400--Sobic009G198100 Sobic004G350100 Sobic004G350100 Sobic010G033400--Sobic004G350100 Sobic001G028400 Sobic001G028400 Sobic010G033400--Sobic001G028400 Sobic010G260500 Sobic010G260500 Sobic010G033400--Sobic010G260500 Sobic003G359300 Sobic003G359300 Sobic010G033400--Sobic003G359300 Sobic003G081000 Sobic003G081000 Sobic010G033400--Sobic003G081000 Sobic001G131800 Sobic001G131800 Sobic010G033400--Sobic001G131800
Octagon: transcription factors


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