Gene annotation
Transcriptome id Sobic.002G423200.1
Synonym IMPA-4, Sb02g043410
Functional annotation importin subunit alpha-1b, putative, expressed
UniProt A0A1B6QGH0
Pfam PF01749 PF16186 PF00514
Panther DB PTHR23316 PTHR23316:SF17
NCBI CDD KOG0166; Karyopherin (importin) alpha
KEGG Orthology -
Gene Ontology GO:0008565; obsolete protein transporter activity GO:0006606protein import into nucleus GO:0005737cytoplasm GO:0005634nucleus GO:0005515protein binding


Orthologs (automatic annotation)
TAIR AT1G09270 : importin alpha isoform 4
RAP-DB (Rice) LOC_Os07g48880.2 : importin subunit alpha-1b, putative, expressed
MaizeGDB (Corn) Zm00025a049211
Brachypodium KQK14549 , KQK14548
Barley HORVU2Hr1G016300.1 , HORVU2Hr1G016300.2
Wheat TraesCS2D02G096200 , TraesCS2B02G112400 , TraesCS2B02G112400 , TraesCS2B02G112400 , TraesCS2B02G112400 , TraesCS2A02G097100
Populus -


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cDNA sequences
Sobic.002G423200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G259800 hydroxyproline-rich glycoprotein family protein, putative, expressed -
2 Sobic.005G133500 expressed protein -
3 Sobic.004G246100 nicalin, putative, expressed K06171: nicastrin
4 Sobic.006G248500 expressed protein -
5 Sobic.008G127400 OsFBX252 - F-box domain containing protein, expressed -
6 Sobic.010G236400 ubiquitin carboxyl-terminal hydrolase domain containing protein, expressed K12847: USP39, U4/U6.U5 tri-snRNP-associated protein 2
7 Sobic.003G353600 pumilio-family RNA binding protein, putative, expressed K17943: pumilio RNA-binding family
8 Sobic.001G138400 crooked neck, putative, expressed K12869: CRN, CRNKL1, CLF1, crooked neck
9 Sobic.006G138000 expressed protein -
10 Sobic.007G027700 expressed protein -
11 Sobic.003G401100 WW domain containing protein, expressed K12865: PQBP1, polyglutamine-binding protein 1
12 Sobic.004G086200 peptidyl-prolyl cis-trans isomerase, putative, expressed K09566: peptidyl-prolyl isomerase G (cyclophilin G)
13 Sobic.009G151200 expressed protein -
14 Sobic.001G306900 tetratricopeptide repeat domain containing protein, expressed K12600: SKI3, superkiller protein 3
15 Sobic.010G204400 phox domain-containing protein, putative, expressed -
16 Sobic.002G288000 bromodomain domain containing protein, expressed K11723: bromodomain-containing protein 7
17 Sobic.003G241200 nucampholin, putative, expressed K13100: pre-mRNA-splicing factor CWC22
18 Sobic.008G153000 MATH domain containing protein, expressed -
19 Sobic.007G000800 expressed protein -
20 Sobic.001G424600 digalactosyldiacylglycerol synthase, chloroplast precursor, putative, expressed K09480: digalactosyldiacylglycerol synthase


Gene co-expression network
sample Sobic002G423200 Sobic002G423200 Sobic002G259800 Sobic002G259800 Sobic002G423200--Sobic002G259800 Sobic005G133500 Sobic005G133500 Sobic002G423200--Sobic005G133500 Sobic004G246100 Sobic004G246100 Sobic002G423200--Sobic004G246100 Sobic006G248500 Sobic006G248500 Sobic002G423200--Sobic006G248500 Sobic008G127400 Sobic008G127400 Sobic002G423200--Sobic008G127400 Sobic010G236400 Sobic010G236400 Sobic002G423200--Sobic010G236400 Sobic003G353600 Sobic003G353600 Sobic002G423200--Sobic003G353600 Sobic001G138400 Sobic001G138400 Sobic002G423200--Sobic001G138400 Sobic006G138000 Sobic006G138000 Sobic002G423200--Sobic006G138000 Sobic009G195200 Sobic009G195200 Sobic002G259800--Sobic009G195200 Sobic001G306900 Sobic001G306900 Sobic002G259800--Sobic001G306900 Sobic005G015900 Sobic005G015900 Sobic002G259800--Sobic005G015900 Sobic003G394300 Sobic003G394300 Sobic002G259800--Sobic003G394300 Sobic002G259800--Sobic006G248500 Sobic001G246500 Sobic001G246500 Sobic002G259800--Sobic001G246500 Sobic005G084100 Sobic005G084100 Sobic002G259800--Sobic005G084100 Sobic002G259800--Sobic002G423200 Sobic004G156500 Sobic004G156500 Sobic002G259800--Sobic004G156500 Sobic009G151200 Sobic009G151200 Sobic005G133500--Sobic009G151200 Sobic005G133500--Sobic002G423200 Sobic003G267800 Sobic003G267800 Sobic005G133500--Sobic003G267800 Sobic005G133500--Sobic002G259800 Sobic006G217200 Sobic006G217200 Sobic005G133500--Sobic006G217200 Sobic008G131000 Sobic008G131000 Sobic005G133500--Sobic008G131000 Sobic005G133500--Sobic004G246100 Sobic005G133500--Sobic010G236400 Sobic001G080900 Sobic001G080900 Sobic005G133500--Sobic001G080900 Sobic008G149800 Sobic008G149800 Sobic004G246100--Sobic008G149800 Sobic008G153000 Sobic008G153000 Sobic004G246100--Sobic008G153000 Sobic007G061700 Sobic007G061700 Sobic004G246100--Sobic007G061700 Sobic002G063900 Sobic002G063900 Sobic004G246100--Sobic002G063900 Sobic008G173100 Sobic008G173100 Sobic004G246100--Sobic008G173100 Sobic006G116100 Sobic006G116100 Sobic004G246100--Sobic006G116100 Sobic006G046700 Sobic006G046700 Sobic004G246100--Sobic006G046700 Sobic009G137100 Sobic009G137100 Sobic004G246100--Sobic009G137100 Sobic002G260400 Sobic002G260400 Sobic004G246100--Sobic002G260400 Sobic001G469800 Sobic001G469800 Sobic006G248500--Sobic001G469800 Sobic006G248500--Sobic002G259800 Sobic003G433500 Sobic003G433500 Sobic006G248500--Sobic003G433500 Sobic006G248500--Sobic009G151200 Sobic008G058800 Sobic008G058800 Sobic006G248500--Sobic008G058800 Sobic004G013600 Sobic004G013600 Sobic006G248500--Sobic004G013600 Sobic007G026000 Sobic007G026000 Sobic006G248500--Sobic007G026000 Sobic004G347100 Sobic004G347100 Sobic006G248500--Sobic004G347100 Sobic009G044900 Sobic009G044900 Sobic006G248500--Sobic009G044900 Sobic007G027700 Sobic007G027700 Sobic008G127400--Sobic007G027700 Sobic006G267300 Sobic006G267300 Sobic008G127400--Sobic006G267300 Sobic003G205501 Sobic003G205501 Sobic008G127400--Sobic003G205501 Sobic006G065800 Sobic006G065800 Sobic008G127400--Sobic006G065800 Sobic004G246700 Sobic004G246700 Sobic008G127400--Sobic004G246700 Sobic008G127400--Sobic008G058800 Sobic008G127400--Sobic002G423200 Sobic008G127400--Sobic006G248500 Sobic010G033400 Sobic010G033400 Sobic008G127400--Sobic010G033400 Sobic004G084300 Sobic004G084300 Sobic010G236400--Sobic004G084300 Sobic002G264200 Sobic002G264200 Sobic010G236400--Sobic002G264200 Sobic010G069100 Sobic010G069100 Sobic010G236400--Sobic010G069100 Sobic002G126500 Sobic002G126500 Sobic010G236400--Sobic002G126500 Sobic004G274200 Sobic004G274200 Sobic010G236400--Sobic004G274200 Sobic010G116600 Sobic010G116600 Sobic010G236400--Sobic010G116600 Sobic007G183900 Sobic007G183900 Sobic010G236400--Sobic007G183900 Sobic002G071500 Sobic002G071500 Sobic010G236400--Sobic002G071500 Sobic003G401100 Sobic003G401100 Sobic010G236400--Sobic003G401100 Sobic006G056000 Sobic006G056000 Sobic003G353600--Sobic006G056000 Sobic003G353600--Sobic001G138400 Sobic003G353600--Sobic002G423200 Sobic004G086200 Sobic004G086200 Sobic003G353600--Sobic004G086200 Sobic002G076000 Sobic002G076000 Sobic003G353600--Sobic002G076000 Sobic010G083000 Sobic010G083000 Sobic003G353600--Sobic010G083000 Sobic007G031600 Sobic007G031600 Sobic003G353600--Sobic007G031600 Sobic003G353600--Sobic008G131000 Sobic004G285000 Sobic004G285000 Sobic003G353600--Sobic004G285000 Sobic001G542700 Sobic001G542700 Sobic001G138400--Sobic001G542700 Sobic001G138400--Sobic003G353600 Sobic001G138400--Sobic002G423200 Sobic008G100100 Sobic008G100100 Sobic001G138400--Sobic008G100100 Sobic003G293200 Sobic003G293200 Sobic001G138400--Sobic003G293200 Sobic001G138400--Sobic007G031600 Sobic005G216300 Sobic005G216300 Sobic001G138400--Sobic005G216300 Sobic001G138400--Sobic009G151200 Sobic001G138400--Sobic007G061700 Sobic001G170100 Sobic001G170100 Sobic006G138000--Sobic001G170100 Sobic001G518400 Sobic001G518400 Sobic006G138000--Sobic001G518400 Sobic001G335900 Sobic001G335900 Sobic006G138000--Sobic001G335900 Sobic001G369000 Sobic001G369000 Sobic006G138000--Sobic001G369000 Sobic010G275500 Sobic010G275500 Sobic006G138000--Sobic010G275500 Sobic003G240700 Sobic003G240700 Sobic006G138000--Sobic003G240700 Sobic003G187500 Sobic003G187500 Sobic006G138000--Sobic003G187500 Sobic001G426600 Sobic001G426600 Sobic006G138000--Sobic001G426600 Sobic010G053800 Sobic010G053800 Sobic006G138000--Sobic010G053800
Octagon: transcription factors


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