Gene annotation
Transcriptome id Sobic.002G288000.1
Synonym Sb02g032020
Functional annotation bromodomain domain containing protein, expressed
UniProt C5X7M2
Pfam PF00439
Panther DB PTHR22881 PTHR22881:SF16
NCBI CDD -
KEGG Orthology K11723; bromodomain-containing protein 7
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT1G20670 : DNA-binding bromodomain-containing protein
RAP-DB (Rice) LOC_Os09g37760.1 : bromodomain domain containing protein, expressed
MaizeGDB (Corn) Zm00025a047963 , Zm00025a014509
Brachypodium KQJ91368 , KQJ91367
Barley HORVU5Hr1G087060.10 , HORVU5Hr1G087060.4 , HORVU5Hr1G087060.5 , HORVU5Hr1G087060.6 , HORVU5Hr1G087060.7 , HORVU5Hr1G087060.1 , HORVU5Hr1G087060.2 , HORVU5Hr1G087060.3 , HORVU5Hr1G087060.8 , HORVU5Hr1G087060.9
Wheat TraesCS5A02G350200 , TraesCS5D02G357300 , TraesCS5B02G352900
Populus PNT47151 , PNT47150 , PNT47149


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G138000 expressed protein -
2 Sobic.010G189000 protein with a conserved N-terminal region, putative, expressed -
3 Sobic.006G183800 KH domain containing protein, putative, expressed K13095: splicing factor 1
4 Sobic.001G518400 EF hand family protein, putative, expressed -
5 Sobic.003G401000 adaptin, putative, expressed K12400: AP-4 complex subunit epsilon-1
6 Sobic.002G423200 importin subunit alpha-1b, putative, expressed -
7 Sobic.001G094000 expressed protein -
8 Sobic.004G325400 cyclic nucleotide-gated ion channel 14, putative, expressed K05391: cyclic nucleotide gated channel, plant
9 Sobic.006G028200 glycine-rich protein, putative, expressed -
10 Sobic.002G259800 hydroxyproline-rich glycoprotein family protein, putative, expressed -
11 Sobic.001G296500 ARABIDILLO-1, putative, expressed -
12 Sobic.008G149800 histone acetyltransferase HAC5, putative, expressed K04498: EP300, CREBBP, E1A/CREB-binding protein
13 Sobic.001G335900 vacuolar protein sorting-associated protein 52, putative, expressed -
14 Sobic.004G138000 expressed protein -
15 Sobic.007G079200 exonuclease, putative, expressed -
16 Sobic.001G170100 WD domain, G-beta repeat domain containing protein, expressed -
17 Sobic.002G158700 TATA binding protein-associated factor, putative, expressed K03131: transcription initiation factor TFIID subunit 6
18 Sobic.006G165000 RNA recognition motif containing protein, expressed -
19 Sobic.007G027700 expressed protein -
20 Sobic.009G229600 tRNA-binding arm, putative, expressed -


Gene co-expression network
sample Sobic002G288000 Sobic002G288000 Sobic006G138000 Sobic006G138000 Sobic002G288000--Sobic006G138000 Sobic010G189000 Sobic010G189000 Sobic002G288000--Sobic010G189000 Sobic006G183800 Sobic006G183800 Sobic002G288000--Sobic006G183800 Sobic001G518400 Sobic001G518400 Sobic002G288000--Sobic001G518400 Sobic003G401000 Sobic003G401000 Sobic002G288000--Sobic003G401000 Sobic002G423200 Sobic002G423200 Sobic002G288000--Sobic002G423200 Sobic001G094000 Sobic001G094000 Sobic002G288000--Sobic001G094000 Sobic004G325400 Sobic004G325400 Sobic002G288000--Sobic004G325400 Sobic006G028200 Sobic006G028200 Sobic002G288000--Sobic006G028200 Sobic001G170100 Sobic001G170100 Sobic006G138000--Sobic001G170100 Sobic006G138000--Sobic001G518400 Sobic001G335900 Sobic001G335900 Sobic006G138000--Sobic001G335900 Sobic001G369000 Sobic001G369000 Sobic006G138000--Sobic001G369000 Sobic010G275500 Sobic010G275500 Sobic006G138000--Sobic010G275500 Sobic003G240700 Sobic003G240700 Sobic006G138000--Sobic003G240700 Sobic003G187500 Sobic003G187500 Sobic006G138000--Sobic003G187500 Sobic001G426600 Sobic001G426600 Sobic006G138000--Sobic001G426600 Sobic010G053800 Sobic010G053800 Sobic006G138000--Sobic010G053800 Sobic010G189000--Sobic006G028200 Sobic007G079200 Sobic007G079200 Sobic010G189000--Sobic007G079200 Sobic010G189000--Sobic001G094000 Sobic009G040700 Sobic009G040700 Sobic010G189000--Sobic009G040700 Sobic010G189000--Sobic006G183800 Sobic010G189000--Sobic002G288000 Sobic004G282400 Sobic004G282400 Sobic010G189000--Sobic004G282400 Sobic006G046700 Sobic006G046700 Sobic010G189000--Sobic006G046700 Sobic004G061900 Sobic004G061900 Sobic010G189000--Sobic004G061900 Sobic006G183800--Sobic001G094000 Sobic003G187400 Sobic003G187400 Sobic006G183800--Sobic003G187400 Sobic009G178800 Sobic009G178800 Sobic006G183800--Sobic009G178800 Sobic008G054500 Sobic008G054500 Sobic006G183800--Sobic008G054500 Sobic006G183800--Sobic009G040700 Sobic003G084900 Sobic003G084900 Sobic006G183800--Sobic003G084900 Sobic008G078100 Sobic008G078100 Sobic006G183800--Sobic008G078100 Sobic001G409600 Sobic001G409600 Sobic006G183800--Sobic001G409600 Sobic002G157000 Sobic002G157000 Sobic006G183800--Sobic002G157000 Sobic001G518400--Sobic001G170100 Sobic001G518400--Sobic006G138000 Sobic001G518400--Sobic001G335900 Sobic001G078100 Sobic001G078100 Sobic001G518400--Sobic001G078100 Sobic009G229600 Sobic009G229600 Sobic001G518400--Sobic009G229600 Sobic001G518400--Sobic010G275500 Sobic006G202200 Sobic006G202200 Sobic001G518400--Sobic006G202200 Sobic003G126600 Sobic003G126600 Sobic001G518400--Sobic003G126600 Sobic001G518400--Sobic001G369000 Sobic002G158700 Sobic002G158700 Sobic003G401000--Sobic002G158700 Sobic003G401000--Sobic003G187400 Sobic002G157300 Sobic002G157300 Sobic003G401000--Sobic002G157300 Sobic009G257800 Sobic009G257800 Sobic003G401000--Sobic009G257800 Sobic001G155000 Sobic001G155000 Sobic003G401000--Sobic001G155000 Sobic003G401000--Sobic009G040700 Sobic003G401000--Sobic001G094000 Sobic003G401000--Sobic006G028200 Sobic003G008500 Sobic003G008500 Sobic003G401000--Sobic003G008500 Sobic002G259800 Sobic002G259800 Sobic002G423200--Sobic002G259800 Sobic005G133500 Sobic005G133500 Sobic002G423200--Sobic005G133500 Sobic004G246100 Sobic004G246100 Sobic002G423200--Sobic004G246100 Sobic006G248500 Sobic006G248500 Sobic002G423200--Sobic006G248500 Sobic008G127400 Sobic008G127400 Sobic002G423200--Sobic008G127400 Sobic010G236400 Sobic010G236400 Sobic002G423200--Sobic010G236400 Sobic003G353600 Sobic003G353600 Sobic002G423200--Sobic003G353600 Sobic001G138400 Sobic001G138400 Sobic002G423200--Sobic001G138400 Sobic002G423200--Sobic006G138000 Sobic007G011400 Sobic007G011400 Sobic001G094000--Sobic007G011400 Sobic001G094000--Sobic009G040700 Sobic001G477800 Sobic001G477800 Sobic001G094000--Sobic001G477800 Sobic001G094000--Sobic002G157000 Sobic003G268300 Sobic003G268300 Sobic001G094000--Sobic003G268300 Sobic001G094000--Sobic002G157300 Sobic001G094000--Sobic003G187400 Sobic004G031700 Sobic004G031700 Sobic001G094000--Sobic004G031700 Sobic006G080300 Sobic006G080300 Sobic001G094000--Sobic006G080300 Sobic004G325400--Sobic009G257800 Sobic007G027700 Sobic007G027700 Sobic004G325400--Sobic007G027700 Sobic007G009400 Sobic007G009400 Sobic004G325400--Sobic007G009400 Sobic003G401100 Sobic003G401100 Sobic004G325400--Sobic003G401100 Sobic001G143500 Sobic001G143500 Sobic004G325400--Sobic001G143500 Sobic004G021200 Sobic004G021200 Sobic004G325400--Sobic004G021200 Sobic004G325400--Sobic003G401000 Sobic004G072100 Sobic004G072100 Sobic004G325400--Sobic004G072100 Sobic004G325400--Sobic008G127400 Sobic006G028200--Sobic003G401000 Sobic006G028200--Sobic001G094000 Sobic006G028200--Sobic009G040700 Sobic006G028200--Sobic010G189000 Sobic006G028200--Sobic003G187400 Sobic006G028200--Sobic006G046700 Sobic001G296500 Sobic001G296500 Sobic006G028200--Sobic001G296500 Sobic003G036900 Sobic003G036900 Sobic006G028200--Sobic003G036900 Sobic006G028200--Sobic001G477800
Octagon: transcription factors


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