Gene annotation
Transcriptome id Sobic.010G189000.1
Synonym Sb10g023905
Functional annotation protein with a conserved N-terminal region, putative, expressed
UniProt A0A194YK62
Pfam PF12695
Panther DB PTHR12277 PTHR12277:SF58
NCBI CDD KOG1552; Predicted alpha/beta hydrolase
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G17150 : alpha/beta-Hydrolases superfamily protein
RAP-DB (Rice) LOC_Os06g40730.1 : protein with a conserved N-terminal region, putative, expressed
MaizeGDB (Corn) Zm00025a042163 , Zm00025a019599
Brachypodium KQK17710 , KQJ93877 , KQJ93878
Barley HORVU7Hr1G090900.30 , HORVU6Hr1G079100.5 , HORVU6Hr1G079100.4 , HORVU6Hr1G079100.6 , HORVU6Hr1G079100.1 , HORVU6Hr1G079100.3 , HORVU6Hr1G079100.2 , HORVU7Hr1G090900.28 , HORVU7Hr1G090900.29 , HORVU7Hr1G090900.24 , HORVU7Hr1G090900.25 , HORVU7Hr1G090900.26 , HORVU7Hr1G090900.27 , HORVU7Hr1G090900.21 , HORVU7Hr1G090900.23 , HORVU7Hr1G090900.11 , HORVU7Hr1G090900.10 , HORVU7Hr1G090900.13 , HORVU7Hr1G090900.12 , HORVU7Hr1G090900.15 , HORVU7Hr1G090900.14 , HORVU7Hr1G090900.16 , HORVU7Hr1G090900.19 , HORVU7Hr1G090900.18 , HORVU7Hr1G090900.5 , HORVU7Hr1G090900.4 , HORVU7Hr1G090900.7 , HORVU7Hr1G090900.6 , HORVU7Hr1G090900.1 , HORVU7Hr1G090900.3 , HORVU7Hr1G090900.2 , HORVU7Hr1G090900.8 , HORVU7Hr1G090900.22 , HORVU7Hr1G090900.20
Wheat TraesCS7A02G382200 , TraesCS7A02G382200 , TraesCS7D02G378700 , TraesCS7B02G285000 , TraesCS7B02G285000 , TraesCS7B02G285000
Populus -


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cDNA sequences
Sobic.010G189000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G028200 glycine-rich protein, putative, expressed -
2 Sobic.007G079200 exonuclease, putative, expressed -
3 Sobic.001G094000 expressed protein -
4 Sobic.009G040700 "OsPPKL2(Ortholog in rice:Zhan et al., 2012)"(PubMedID : 31659919)@serine/threonine protein phosphatase, putative, expressed K01090: protein phosphatase
5 Sobic.006G183800 KH domain containing protein, putative, expressed K13095: splicing factor 1
6 Sobic.002G288000 bromodomain domain containing protein, expressed K11723: bromodomain-containing protein 7
7 Sobic.004G282400 rhoGAP domain containing protein, expressed -
8 Sobic.006G046700 vacuolar protein sorting-associated protein 11, putative, expressed -
9 Sobic.004G061900 Sad1 / UNC-like C-terminal domain containing protein, putative, expressed K19347: SUN domain-containing protein 1/2
10 Sobic.006G173100 pre-mRNA-processing factor 31, putative, expressed K12844: U4/U6 small nuclear ribonucleoprotein PRP31
11 Sobic.003G176400 - -
12 Sobic.003G187400 - K12823: DDX5, ATP-dependent RNA helicase DDX5/DBP2
13 Sobic.006G211500 "GA biosynthetic gene, causes dwarfism accompanied by unusual culm bending in the mutants"(PubMedID : 24924234)@ent-kaurene synthase, chloroplast precursor, putative, expressed K04121: ent-kaurene synthase
14 Sobic.001G477800 expressed protein -
15 Sobic.002G414500 OsFBK19 - F-box domain and kelch repeat containing protein, expressed -
16 Sobic.001G514000 OsFBL10 - F-box domain and LRR containing protein, expressed -
17 Sobic.005G149500 palmitoyltransferase TIP1, putative, expressed K18932: palmitoyltransferase
18 Sobic.004G196700 expressed protein -
19 Sobic.001G296500 ARABIDILLO-1, putative, expressed -
20 Sobic.002G157300 Ser/Thr protein phosphatase family protein, putative, expressed K15423: serine/threonine-protein phosphatase 4 catalytic subunit


Gene co-expression network
sample Sobic010G189000 Sobic010G189000 Sobic006G028200 Sobic006G028200 Sobic010G189000--Sobic006G028200 Sobic007G079200 Sobic007G079200 Sobic010G189000--Sobic007G079200 Sobic001G094000 Sobic001G094000 Sobic010G189000--Sobic001G094000 Sobic009G040700 Sobic009G040700 Sobic010G189000--Sobic009G040700 Sobic006G183800 Sobic006G183800 Sobic010G189000--Sobic006G183800 Sobic002G288000 Sobic002G288000 Sobic010G189000--Sobic002G288000 Sobic004G282400 Sobic004G282400 Sobic010G189000--Sobic004G282400 Sobic006G046700 Sobic006G046700 Sobic010G189000--Sobic006G046700 Sobic004G061900 Sobic004G061900 Sobic010G189000--Sobic004G061900 Sobic003G401000 Sobic003G401000 Sobic006G028200--Sobic003G401000 Sobic006G028200--Sobic001G094000 Sobic006G028200--Sobic009G040700 Sobic006G028200--Sobic010G189000 Sobic003G187400 Sobic003G187400 Sobic006G028200--Sobic003G187400 Sobic006G028200--Sobic006G046700 Sobic001G296500 Sobic001G296500 Sobic006G028200--Sobic001G296500 Sobic003G036900 Sobic003G036900 Sobic006G028200--Sobic003G036900 Sobic001G477800 Sobic001G477800 Sobic006G028200--Sobic001G477800 Sobic003G176400 Sobic003G176400 Sobic007G079200--Sobic003G176400 Sobic007G079200--Sobic001G094000 Sobic007G079200--Sobic010G189000 Sobic007G079200--Sobic009G040700 Sobic002G158700 Sobic002G158700 Sobic007G079200--Sobic002G158700 Sobic007G079200--Sobic006G046700 Sobic004G031700 Sobic004G031700 Sobic007G079200--Sobic004G031700 Sobic007G079200--Sobic001G477800 Sobic007G079200--Sobic001G296500 Sobic007G011400 Sobic007G011400 Sobic001G094000--Sobic007G011400 Sobic001G094000--Sobic009G040700 Sobic001G094000--Sobic001G477800 Sobic002G157000 Sobic002G157000 Sobic001G094000--Sobic002G157000 Sobic003G268300 Sobic003G268300 Sobic001G094000--Sobic003G268300 Sobic002G157300 Sobic002G157300 Sobic001G094000--Sobic002G157300 Sobic001G094000--Sobic003G187400 Sobic001G094000--Sobic004G031700 Sobic006G080300 Sobic006G080300 Sobic001G094000--Sobic006G080300 Sobic009G040700--Sobic001G094000 Sobic009G040700--Sobic003G187400 Sobic005G149500 Sobic005G149500 Sobic009G040700--Sobic005G149500 Sobic009G040700--Sobic007G011400 Sobic009G040700--Sobic002G157300 Sobic009G040700--Sobic001G477800 Sobic006G145000 Sobic006G145000 Sobic009G040700--Sobic006G145000 Sobic004G196700 Sobic004G196700 Sobic009G040700--Sobic004G196700 Sobic008G078100 Sobic008G078100 Sobic009G040700--Sobic008G078100 Sobic006G183800--Sobic001G094000 Sobic006G183800--Sobic003G187400 Sobic009G178800 Sobic009G178800 Sobic006G183800--Sobic009G178800 Sobic008G054500 Sobic008G054500 Sobic006G183800--Sobic008G054500 Sobic006G183800--Sobic009G040700 Sobic003G084900 Sobic003G084900 Sobic006G183800--Sobic003G084900 Sobic006G183800--Sobic008G078100 Sobic001G409600 Sobic001G409600 Sobic006G183800--Sobic001G409600 Sobic006G183800--Sobic002G157000 Sobic006G138000 Sobic006G138000 Sobic002G288000--Sobic006G138000 Sobic002G288000--Sobic010G189000 Sobic002G288000--Sobic006G183800 Sobic001G518400 Sobic001G518400 Sobic002G288000--Sobic001G518400 Sobic002G288000--Sobic003G401000 Sobic002G423200 Sobic002G423200 Sobic002G288000--Sobic002G423200 Sobic002G288000--Sobic001G094000 Sobic004G325400 Sobic004G325400 Sobic002G288000--Sobic004G325400 Sobic002G288000--Sobic006G028200 Sobic004G282400--Sobic010G189000 Sobic004G350100 Sobic004G350100 Sobic004G282400--Sobic004G350100 Sobic004G330900 Sobic004G330900 Sobic004G282400--Sobic004G330900 Sobic009G056800 Sobic009G056800 Sobic004G282400--Sobic009G056800 Sobic004G205600 Sobic004G205600 Sobic004G282400--Sobic004G205600 Sobic006G173100 Sobic006G173100 Sobic004G282400--Sobic006G173100 Sobic006G114500 Sobic006G114500 Sobic004G282400--Sobic006G114500 Sobic007G202600 Sobic007G202600 Sobic004G282400--Sobic007G202600 Sobic004G282400--Sobic002G423200 Sobic008G153000 Sobic008G153000 Sobic006G046700--Sobic008G153000 Sobic006G046700--Sobic004G031700 Sobic007G026000 Sobic007G026000 Sobic006G046700--Sobic007G026000 Sobic001G206100 Sobic001G206100 Sobic006G046700--Sobic001G206100 Sobic001G306900 Sobic001G306900 Sobic006G046700--Sobic001G306900 Sobic003G445400 Sobic003G445400 Sobic006G046700--Sobic003G445400 Sobic001G425000 Sobic001G425000 Sobic006G046700--Sobic001G425000 Sobic001G405300 Sobic001G405300 Sobic006G046700--Sobic001G405300 Sobic006G013500 Sobic006G013500 Sobic006G046700--Sobic006G013500 Sobic007G191100 Sobic007G191100 Sobic004G061900--Sobic007G191100 Sobic008G129700 Sobic008G129700 Sobic004G061900--Sobic008G129700 Sobic006G129700 Sobic006G129700 Sobic004G061900--Sobic006G129700 Sobic008G117200 Sobic008G117200 Sobic004G061900--Sobic008G117200 Sobic009G030300 Sobic009G030300 Sobic004G061900--Sobic009G030300 Sobic004G345700 Sobic004G345700 Sobic004G061900--Sobic004G345700 Sobic002G177400 Sobic002G177400 Sobic004G061900--Sobic002G177400 Sobic004G061900--Sobic001G094000 Sobic004G027100 Sobic004G027100 Sobic004G061900--Sobic004G027100
Octagon: transcription factors


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