Gene annotation
Transcriptome id Sobic.002G414500.1
Synonym SKIP6, Sb02g042690
Functional annotation OsFBK19 - F-box domain and kelch repeat containing protein, expressed
UniProt C5X5I4
Pfam PF01344
Panther DB PTHR24414 PTHR24414:SF37
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT2G21950 : SKP1 interacting partner 6
RAP-DB (Rice) LOC_Os07g47650.1 : OsFBK19 - F-box domain and kelch repeat containing protein, expressed
MaizeGDB (Corn) Zm00025a015419
Brachypodium KQK14681
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G189000 protein with a conserved N-terminal region, putative, expressed -
2 Sobic.006G183800 KH domain containing protein, putative, expressed K13095: splicing factor 1
3 Sobic.008G054500 WD domain, G-beta repeat domain containing protein, expressed -
4 Sobic.009G178800 bZIP transcription factor, putative, expressed K14432: ABA responsive element binding factor
5 Sobic.002G288000 bromodomain domain containing protein, expressed K11723: bromodomain-containing protein 7
6 Sobic.002G370900 OsPOP16 - Putative Prolyl Oligopeptidase homologue, expressed K06889: uncharacterized protein
7 Sobic.007G079200 exonuclease, putative, expressed -
8 Sobic.006G082900 expressed protein -
9 Sobic.007G026000 ATBET9, putative, expressed -
10 Sobic.001G296500 ARABIDILLO-1, putative, expressed -
11 Sobic.007G061700 vacuolar protein sorting-associated protein 18, putative, expressed -
12 Sobic.007G227000 riboflavin biosynthesis protein ribAB, chloroplast precursor, putative, expressed K14652: 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II
13 Sobic.006G028200 glycine-rich protein, putative, expressed -
14 Sobic.008G153000 MATH domain containing protein, expressed -
15 Sobic.008G042600 N-acetylglucosaminyltransferase I, putative, expressed K00726: alpha-1,3-mannosyl-glycoprotein beta-1,2-N-acetylglucosaminyltransferase
16 Sobic.002G006300 expressed protein -
17 Sobic.006G046700 vacuolar protein sorting-associated protein 11, putative, expressed -
18 Sobic.008G078100 EDM2, putative, expressed -
19 Sobic.008G149800 histone acetyltransferase HAC5, putative, expressed K04498: EP300, CREBBP, E1A/CREB-binding protein
20 Sobic.001G544200 endonuclease, putative, expressed K10848: ERCC4, DNA excision repair protein ERCC-4


Gene co-expression network
sample Sobic002G414500 Sobic002G414500 Sobic010G189000 Sobic010G189000 Sobic002G414500--Sobic010G189000 Sobic006G183800 Sobic006G183800 Sobic002G414500--Sobic006G183800 Sobic008G054500 Sobic008G054500 Sobic002G414500--Sobic008G054500 Sobic009G178800 Sobic009G178800 Sobic002G414500--Sobic009G178800 Sobic002G288000 Sobic002G288000 Sobic002G414500--Sobic002G288000 Sobic002G370900 Sobic002G370900 Sobic002G414500--Sobic002G370900 Sobic007G079200 Sobic007G079200 Sobic002G414500--Sobic007G079200 Sobic006G082900 Sobic006G082900 Sobic002G414500--Sobic006G082900 Sobic007G026000 Sobic007G026000 Sobic002G414500--Sobic007G026000 Sobic006G028200 Sobic006G028200 Sobic010G189000--Sobic006G028200 Sobic010G189000--Sobic007G079200 Sobic001G094000 Sobic001G094000 Sobic010G189000--Sobic001G094000 Sobic009G040700 Sobic009G040700 Sobic010G189000--Sobic009G040700 Sobic010G189000--Sobic006G183800 Sobic010G189000--Sobic002G288000 Sobic004G282400 Sobic004G282400 Sobic010G189000--Sobic004G282400 Sobic006G046700 Sobic006G046700 Sobic010G189000--Sobic006G046700 Sobic004G061900 Sobic004G061900 Sobic010G189000--Sobic004G061900 Sobic006G183800--Sobic001G094000 Sobic003G187400 Sobic003G187400 Sobic006G183800--Sobic003G187400 Sobic006G183800--Sobic009G178800 Sobic006G183800--Sobic008G054500 Sobic006G183800--Sobic009G040700 Sobic003G084900 Sobic003G084900 Sobic006G183800--Sobic003G084900 Sobic008G078100 Sobic008G078100 Sobic006G183800--Sobic008G078100 Sobic001G409600 Sobic001G409600 Sobic006G183800--Sobic001G409600 Sobic002G157000 Sobic002G157000 Sobic006G183800--Sobic002G157000 Sobic008G173900 Sobic008G173900 Sobic008G054500--Sobic008G173900 Sobic003G200200 Sobic003G200200 Sobic008G054500--Sobic003G200200 Sobic003G268300 Sobic003G268300 Sobic008G054500--Sobic003G268300 Sobic002G248400 Sobic002G248400 Sobic008G054500--Sobic002G248400 Sobic008G054500--Sobic008G078100 Sobic008G054500--Sobic002G157000 Sobic003G445400 Sobic003G445400 Sobic008G054500--Sobic003G445400 Sobic007G185900 Sobic007G185900 Sobic008G054500--Sobic007G185900 Sobic003G397800 Sobic003G397800 Sobic008G054500--Sobic003G397800 Sobic009G178800--Sobic002G248400 Sobic009G178800--Sobic008G054500 Sobic009G178800--Sobic002G157000 Sobic009G178800--Sobic006G183800 Sobic006G032400 Sobic006G032400 Sobic009G178800--Sobic006G032400 Sobic002G320500 Sobic002G320500 Sobic009G178800--Sobic002G320500 Sobic001G420200 Sobic001G420200 Sobic009G178800--Sobic001G420200 Sobic002G144933 Sobic002G144933 Sobic009G178800--Sobic002G144933 Sobic009G178800--Sobic003G084900 Sobic006G138000 Sobic006G138000 Sobic002G288000--Sobic006G138000 Sobic002G288000--Sobic010G189000 Sobic002G288000--Sobic006G183800 Sobic001G518400 Sobic001G518400 Sobic002G288000--Sobic001G518400 Sobic003G401000 Sobic003G401000 Sobic002G288000--Sobic003G401000 Sobic002G423200 Sobic002G423200 Sobic002G288000--Sobic002G423200 Sobic002G288000--Sobic001G094000 Sobic004G325400 Sobic004G325400 Sobic002G288000--Sobic004G325400 Sobic002G288000--Sobic006G028200 Sobic001G176200 Sobic001G176200 Sobic002G370900--Sobic001G176200 Sobic002G370900--Sobic006G082900 Sobic004G067700 Sobic004G067700 Sobic002G370900--Sobic004G067700 Sobic006G173100 Sobic006G173100 Sobic002G370900--Sobic006G173100 Sobic003G008500 Sobic003G008500 Sobic002G370900--Sobic003G008500 Sobic002G260400 Sobic002G260400 Sobic002G370900--Sobic002G260400 Sobic002G310200 Sobic002G310200 Sobic002G370900--Sobic002G310200 Sobic002G197100 Sobic002G197100 Sobic002G370900--Sobic002G197100 Sobic004G345700 Sobic004G345700 Sobic002G370900--Sobic004G345700 Sobic003G176400 Sobic003G176400 Sobic007G079200--Sobic003G176400 Sobic007G079200--Sobic001G094000 Sobic007G079200--Sobic010G189000 Sobic007G079200--Sobic009G040700 Sobic002G158700 Sobic002G158700 Sobic007G079200--Sobic002G158700 Sobic007G079200--Sobic006G046700 Sobic004G031700 Sobic004G031700 Sobic007G079200--Sobic004G031700 Sobic001G477800 Sobic001G477800 Sobic007G079200--Sobic001G477800 Sobic001G296500 Sobic001G296500 Sobic007G079200--Sobic001G296500 Sobic006G082900--Sobic002G370900 Sobic006G082900--Sobic003G008500 Sobic006G202200 Sobic006G202200 Sobic006G082900--Sobic006G202200 Sobic004G007300 Sobic004G007300 Sobic006G082900--Sobic004G007300 Sobic006G082900--Sobic004G345700 Sobic008G149800 Sobic008G149800 Sobic006G082900--Sobic008G149800 Sobic006G082900--Sobic006G173100 Sobic006G082900--Sobic003G401000 Sobic006G195700 Sobic006G195700 Sobic006G082900--Sobic006G195700 Sobic008G153000 Sobic008G153000 Sobic007G026000--Sobic008G153000 Sobic007G026000--Sobic006G046700 Sobic005G059100 Sobic005G059100 Sobic007G026000--Sobic005G059100 Sobic007G026000--Sobic003G445400 Sobic009G119000 Sobic009G119000 Sobic007G026000--Sobic009G119000 Sobic002G153700 Sobic002G153700 Sobic007G026000--Sobic002G153700 Sobic001G206100 Sobic001G206100 Sobic007G026000--Sobic001G206100 Sobic006G013500 Sobic006G013500 Sobic007G026000--Sobic006G013500 Sobic007G026000--Sobic004G031700
Octagon: transcription factors


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