Gene annotation
Transcriptome id Sobic.006G028200.1
Synonym
Functional annotation glycine-rich protein, putative, expressed
UniProt C5YCU9
Pfam -
Panther DB PTHR31513 PTHR31513:SF2
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G47020 : -
RAP-DB (Rice) LOC_Os04g10380.1 : glycine-rich protein, putative, expressed
MaizeGDB (Corn) Zm00025a055610
Brachypodium KQJ81459 , PNT60500
Barley HORVU2Hr1G003970.9 , HORVU2Hr1G003970.8 , HORVU2Hr1G003970.1 , HORVU2Hr1G003970.3 , HORVU2Hr1G003970.2 , HORVU2Hr1G003970.5 , HORVU2Hr1G003970.4 , HORVU2Hr1G003970.7 , HORVU2Hr1G003970.6 , HORVU2Hr1G003870.1 , HORVU2Hr1G003870.2 , HORVU2Hr1G003970.19 , HORVU2Hr1G003970.18 , HORVU2Hr1G003970.15 , HORVU2Hr1G003970.14 , HORVU2Hr1G003970.17 , HORVU2Hr1G003970.16 , HORVU2Hr1G003970.11 , HORVU2Hr1G003970.10 , HORVU2Hr1G003970.13 , HORVU2Hr1G003970.12
Wheat TraesCS2B02G038200 , TraesCS2D02G027300 , TraesCS2A02G025300
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G401000 adaptin, putative, expressed K12400: AP-4 complex subunit epsilon-1
2 Sobic.001G094000 expressed protein -
3 Sobic.009G040700 "OsPPKL2(Ortholog in rice:Zhan et al., 2012)"(PubMedID : 31659919)@serine/threonine protein phosphatase, putative, expressed K01090: protein phosphatase
4 Sobic.010G189000 protein with a conserved N-terminal region, putative, expressed -
5 Sobic.003G187400 - K12823: DDX5, ATP-dependent RNA helicase DDX5/DBP2
6 Sobic.006G046700 vacuolar protein sorting-associated protein 11, putative, expressed -
7 Sobic.001G296500 ARABIDILLO-1, putative, expressed -
8 Sobic.003G036900 glycine-rich protein, putative, expressed -
9 Sobic.001G477800 expressed protein -
10 Sobic.004G061900 Sad1 / UNC-like C-terminal domain containing protein, putative, expressed K19347: SUN domain-containing protein 1/2
11 Sobic.007G185900 IBR domain containing protein, putative, expressed K11968: ariadne-1
12 Sobic.005G149500 palmitoyltransferase TIP1, putative, expressed K18932: palmitoyltransferase
13 Sobic.001G155000 DNA-directed RNA polymerase II subunit RPB2, putative, expressed K03010: RPB2, DNA-directed RNA polymerase II subunit RPB2
14 Sobic.004G196700 expressed protein -
15 Sobic.002G157300 Ser/Thr protein phosphatase family protein, putative, expressed K15423: serine/threonine-protein phosphatase 4 catalytic subunit
16 Sobic.008G042600 N-acetylglucosaminyltransferase I, putative, expressed K00726: alpha-1,3-mannosyl-glycoprotein beta-1,2-N-acetylglucosaminyltransferase
17 Sobic.008G078100 EDM2, putative, expressed -
18 Sobic.008G054500 WD domain, G-beta repeat domain containing protein, expressed -
19 Sobic.001G514000 OsFBL10 - F-box domain and LRR containing protein, expressed -
20 Sobic.001G504200 HEAT repeat family protein, putative, expressed -


Gene co-expression network
sample Sobic006G028200 Sobic006G028200 Sobic003G401000 Sobic003G401000 Sobic006G028200--Sobic003G401000 Sobic001G094000 Sobic001G094000 Sobic006G028200--Sobic001G094000 Sobic009G040700 Sobic009G040700 Sobic006G028200--Sobic009G040700 Sobic010G189000 Sobic010G189000 Sobic006G028200--Sobic010G189000 Sobic003G187400 Sobic003G187400 Sobic006G028200--Sobic003G187400 Sobic006G046700 Sobic006G046700 Sobic006G028200--Sobic006G046700 Sobic001G296500 Sobic001G296500 Sobic006G028200--Sobic001G296500 Sobic003G036900 Sobic003G036900 Sobic006G028200--Sobic003G036900 Sobic001G477800 Sobic001G477800 Sobic006G028200--Sobic001G477800 Sobic002G158700 Sobic002G158700 Sobic003G401000--Sobic002G158700 Sobic003G401000--Sobic003G187400 Sobic002G157300 Sobic002G157300 Sobic003G401000--Sobic002G157300 Sobic009G257800 Sobic009G257800 Sobic003G401000--Sobic009G257800 Sobic001G155000 Sobic001G155000 Sobic003G401000--Sobic001G155000 Sobic003G401000--Sobic009G040700 Sobic003G401000--Sobic001G094000 Sobic003G401000--Sobic006G028200 Sobic003G008500 Sobic003G008500 Sobic003G401000--Sobic003G008500 Sobic007G011400 Sobic007G011400 Sobic001G094000--Sobic007G011400 Sobic001G094000--Sobic009G040700 Sobic001G094000--Sobic001G477800 Sobic002G157000 Sobic002G157000 Sobic001G094000--Sobic002G157000 Sobic003G268300 Sobic003G268300 Sobic001G094000--Sobic003G268300 Sobic001G094000--Sobic002G157300 Sobic001G094000--Sobic003G187400 Sobic004G031700 Sobic004G031700 Sobic001G094000--Sobic004G031700 Sobic006G080300 Sobic006G080300 Sobic001G094000--Sobic006G080300 Sobic009G040700--Sobic001G094000 Sobic009G040700--Sobic003G187400 Sobic005G149500 Sobic005G149500 Sobic009G040700--Sobic005G149500 Sobic009G040700--Sobic007G011400 Sobic009G040700--Sobic002G157300 Sobic009G040700--Sobic001G477800 Sobic006G145000 Sobic006G145000 Sobic009G040700--Sobic006G145000 Sobic004G196700 Sobic004G196700 Sobic009G040700--Sobic004G196700 Sobic008G078100 Sobic008G078100 Sobic009G040700--Sobic008G078100 Sobic010G189000--Sobic006G028200 Sobic007G079200 Sobic007G079200 Sobic010G189000--Sobic007G079200 Sobic010G189000--Sobic001G094000 Sobic010G189000--Sobic009G040700 Sobic006G183800 Sobic006G183800 Sobic010G189000--Sobic006G183800 Sobic002G288000 Sobic002G288000 Sobic010G189000--Sobic002G288000 Sobic004G282400 Sobic004G282400 Sobic010G189000--Sobic004G282400 Sobic010G189000--Sobic006G046700 Sobic004G061900 Sobic004G061900 Sobic010G189000--Sobic004G061900 Sobic003G187400--Sobic002G157300 Sobic003G187400--Sobic005G149500 Sobic003G187400--Sobic009G040700 Sobic003G187400--Sobic001G094000 Sobic006G173100 Sobic006G173100 Sobic003G187400--Sobic006G173100 Sobic006G060100 Sobic006G060100 Sobic003G187400--Sobic006G060100 Sobic003G187400--Sobic003G401000 Sobic003G187400--Sobic004G196700 Sobic007G104800 Sobic007G104800 Sobic003G187400--Sobic007G104800 Sobic008G153000 Sobic008G153000 Sobic006G046700--Sobic008G153000 Sobic006G046700--Sobic004G031700 Sobic007G026000 Sobic007G026000 Sobic006G046700--Sobic007G026000 Sobic001G206100 Sobic001G206100 Sobic006G046700--Sobic001G206100 Sobic001G306900 Sobic001G306900 Sobic006G046700--Sobic001G306900 Sobic003G445400 Sobic003G445400 Sobic006G046700--Sobic003G445400 Sobic001G425000 Sobic001G425000 Sobic006G046700--Sobic001G425000 Sobic001G405300 Sobic001G405300 Sobic006G046700--Sobic001G405300 Sobic006G013500 Sobic006G013500 Sobic006G046700--Sobic006G013500 Sobic001G296500--Sobic003G401000 Sobic001G296500--Sobic001G094000 Sobic003G084900 Sobic003G084900 Sobic001G296500--Sobic003G084900 Sobic003G336800 Sobic003G336800 Sobic001G296500--Sobic003G336800 Sobic010G166000 Sobic010G166000 Sobic001G296500--Sobic010G166000 Sobic001G296500--Sobic004G031700 Sobic001G296500--Sobic002G158700 Sobic001G514000 Sobic001G514000 Sobic001G296500--Sobic001G514000 Sobic001G296500--Sobic002G157300 Sobic003G036900--Sobic001G155000 Sobic010G201500 Sobic010G201500 Sobic003G036900--Sobic010G201500 Sobic010G275500 Sobic010G275500 Sobic003G036900--Sobic010G275500 Sobic003G036900--Sobic006G028200 Sobic004G146500 Sobic004G146500 Sobic003G036900--Sobic004G146500 Sobic010G116600 Sobic010G116600 Sobic003G036900--Sobic010G116600 Sobic010G053800 Sobic010G053800 Sobic003G036900--Sobic010G053800 Sobic004G138000 Sobic004G138000 Sobic003G036900--Sobic004G138000 Sobic006G035300 Sobic006G035300 Sobic003G036900--Sobic006G035300 Sobic002G313300 Sobic002G313300 Sobic001G477800--Sobic002G313300 Sobic001G477800--Sobic004G031700 Sobic001G477800--Sobic001G094000 Sobic001G544200 Sobic001G544200 Sobic001G477800--Sobic001G544200 Sobic001G543900 Sobic001G543900 Sobic001G477800--Sobic001G543900 Sobic001G477800--Sobic006G080300 Sobic001G477800--Sobic009G040700 Sobic001G477800--Sobic007G011400 Sobic006G009400 Sobic006G009400 Sobic001G477800--Sobic006G009400
Octagon: transcription factors


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