Gene annotation
Transcriptome id Sobic.003G036900.1
Synonym Sb03g003300
Functional annotation glycine-rich protein, putative, expressed
UniProt C5XM07
Pfam -
Panther DB PTHR31513 PTHR31513:SF4
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G11700 : -
RAP-DB (Rice) LOC_Os01g09246.1 : glycine-rich protein, putative, expressed
MaizeGDB (Corn) Zm00025a023070 , Zm00025a043092 , Zm00025a035782
Brachypodium KQK07167 , KQK03094
Barley HORVU1Hr1G027850.4 , HORVU1Hr1G027850.3 , HORVU1Hr1G027850.2 , HORVU1Hr1G027850.17 , HORVU1Hr1G027850.14 , HORVU1Hr1G027850.13 , HORVU1Hr1G027850.12 , HORVU1Hr1G027850.11 , HORVU1Hr1G027850.10 , HORVU1Hr1G027850.18 , HORVU3Hr1G019920.1 , HORVU3Hr1G019920.6 , HORVU3Hr1G019920.7 , HORVU1Hr1G027850.21 , HORVU1Hr1G027850.24 , HORVU1Hr1G027850.22 , HORVU1Hr1G027850.23 , HORVU3Hr1G019920.4 , HORVU3Hr1G019920.8 , HORVU3Hr1G019920.9 , HORVU1Hr1G027850.9 , HORVU1Hr1G027850.8 , HORVU1Hr1G027850.7 , HORVU1Hr1G027850.6 , HORVU1Hr1G027850.1 , HORVU3Hr1G019920.2 , HORVU3Hr1G019920.3 , HORVU3Hr1G019920.5 , HORVU3Hr1G019920.10 , HORVU3Hr1G019920.11
Wheat TraesCS3A02G109900 , TraesCS3D02G111600 , TraesCS3A02G109900 , TraesCS1D02G123100 , TraesCS3A02G109900 , TraesCS3A02G109900 , TraesCS1B02G141300 , TraesCS1B02G141300 , TraesCS1B02G141300 , TraesCS1B02G141300 , TraesCS1A02G122100 , TraesCS3D02G111600 , TraesCS3B02G129000 , TraesCS3B02G129000
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G155000 DNA-directed RNA polymerase II subunit RPB2, putative, expressed K03010: RPB2, DNA-directed RNA polymerase II subunit RPB2
2 Sobic.010G201500 zinc finger C-x8-C-x5-C-x3-H type family protein, expressed -
3 Sobic.010G275500 EF hand family protein, putative, expressed -
4 Sobic.006G028200 glycine-rich protein, putative, expressed -
5 Sobic.004G146500 ataxin-2 related protein, putative, expressed -
6 Sobic.010G116600 FHA domain containing protein, putative, expressed -
7 Sobic.010G053800 AP-1 complex subunit gamma-1, putative, expressed K12391: AP-1 complex subunit gamma-1
8 Sobic.004G138000 expressed protein -
9 Sobic.006G035300 expressed protein -
10 Sobic.002G153700 SWP, putative, expressed K15156: MED14, mediator of RNA polymerase II transcription subunit 14
11 Sobic.002G071500 cleavage and polyadenylation specificity factor, putative, expressed K12830: SF3B3, SAP130, splicing factor 3B subunit 3
12 Sobic.010G069100 expressed protein -
13 Sobic.010G065300 expressed protein K11643: CHD4, chromodomain-helicase-DNA-binding protein 4
14 Sobic.006G046700 vacuolar protein sorting-associated protein 11, putative, expressed -
15 Sobic.001G504200 HEAT repeat family protein, putative, expressed -
16 Sobic.004G051200 WD domain containing protein, putative, expressed -
17 Sobic.008G009700 WD domain and HEAT domain containing protein, putative, expressed K07204: regulatory associated protein of mTOR
18 Sobic.006G163800 diacylglycerol kinase, putative, expressed -
19 Sobic.008G153000 MATH domain containing protein, expressed -
20 Sobic.001G306900 tetratricopeptide repeat domain containing protein, expressed K12600: SKI3, superkiller protein 3


Gene co-expression network
sample Sobic003G036900 Sobic003G036900 Sobic001G155000 Sobic001G155000 Sobic003G036900--Sobic001G155000 Sobic010G201500 Sobic010G201500 Sobic003G036900--Sobic010G201500 Sobic010G275500 Sobic010G275500 Sobic003G036900--Sobic010G275500 Sobic006G028200 Sobic006G028200 Sobic003G036900--Sobic006G028200 Sobic004G146500 Sobic004G146500 Sobic003G036900--Sobic004G146500 Sobic010G116600 Sobic010G116600 Sobic003G036900--Sobic010G116600 Sobic010G053800 Sobic010G053800 Sobic003G036900--Sobic010G053800 Sobic004G138000 Sobic004G138000 Sobic003G036900--Sobic004G138000 Sobic006G035300 Sobic006G035300 Sobic003G036900--Sobic006G035300 Sobic008G047800 Sobic008G047800 Sobic001G155000--Sobic008G047800 Sobic002G006900 Sobic002G006900 Sobic001G155000--Sobic002G006900 Sobic003G200200 Sobic003G200200 Sobic001G155000--Sobic003G200200 Sobic009G040600 Sobic009G040600 Sobic001G155000--Sobic009G040600 Sobic001G222500 Sobic001G222500 Sobic001G155000--Sobic001G222500 Sobic007G011300 Sobic007G011300 Sobic001G155000--Sobic007G011300 Sobic008G153000 Sobic008G153000 Sobic001G155000--Sobic008G153000 Sobic001G155000--Sobic010G053800 Sobic007G217000 Sobic007G217000 Sobic001G155000--Sobic007G217000 Sobic002G071500 Sobic002G071500 Sobic010G201500--Sobic002G071500 Sobic007G065400 Sobic007G065400 Sobic010G201500--Sobic007G065400 Sobic004G271000 Sobic004G271000 Sobic010G201500--Sobic004G271000 Sobic003G372700 Sobic003G372700 Sobic010G201500--Sobic003G372700 Sobic010G201500--Sobic002G006900 Sobic002G191800 Sobic002G191800 Sobic010G201500--Sobic002G191800 Sobic010G065300 Sobic010G065300 Sobic010G201500--Sobic010G065300 Sobic010G069100 Sobic010G069100 Sobic010G201500--Sobic010G069100 Sobic010G201500--Sobic001G155000 Sobic010G275500--Sobic010G053800 Sobic004G072100 Sobic004G072100 Sobic010G275500--Sobic004G072100 Sobic006G012500 Sobic006G012500 Sobic010G275500--Sobic006G012500 Sobic010G275500--Sobic001G155000 Sobic010G275500--Sobic010G116600 Sobic010G275500--Sobic010G069100 Sobic009G119000 Sobic009G119000 Sobic010G275500--Sobic009G119000 Sobic007G183900 Sobic007G183900 Sobic010G275500--Sobic007G183900 Sobic002G397500 Sobic002G397500 Sobic010G275500--Sobic002G397500 Sobic003G401000 Sobic003G401000 Sobic006G028200--Sobic003G401000 Sobic001G094000 Sobic001G094000 Sobic006G028200--Sobic001G094000 Sobic009G040700 Sobic009G040700 Sobic006G028200--Sobic009G040700 Sobic010G189000 Sobic010G189000 Sobic006G028200--Sobic010G189000 Sobic003G187400 Sobic003G187400 Sobic006G028200--Sobic003G187400 Sobic006G046700 Sobic006G046700 Sobic006G028200--Sobic006G046700 Sobic001G296500 Sobic001G296500 Sobic006G028200--Sobic001G296500 Sobic006G028200--Sobic003G036900 Sobic001G477800 Sobic001G477800 Sobic006G028200--Sobic001G477800 Sobic001G109800 Sobic001G109800 Sobic004G146500--Sobic001G109800 Sobic004G146500--Sobic010G069100 Sobic002G297200 Sobic002G297200 Sobic004G146500--Sobic002G297200 Sobic007G119200 Sobic007G119200 Sobic004G146500--Sobic007G119200 Sobic004G274200 Sobic004G274200 Sobic004G146500--Sobic004G274200 Sobic001G220300 Sobic001G220300 Sobic004G146500--Sobic001G220300 Sobic004G146500--Sobic001G155000 Sobic002G034600 Sobic002G034600 Sobic004G146500--Sobic002G034600 Sobic004G146500--Sobic008G047800 Sobic010G116600--Sobic002G071500 Sobic002G299700 Sobic002G299700 Sobic010G116600--Sobic002G299700 Sobic003G093800 Sobic003G093800 Sobic010G116600--Sobic003G093800 Sobic009G044800 Sobic009G044800 Sobic010G116600--Sobic009G044800 Sobic010G116600--Sobic004G072100 Sobic010G236400 Sobic010G236400 Sobic010G116600--Sobic010G236400 Sobic010G116600--Sobic010G275500 Sobic003G408600 Sobic003G408600 Sobic010G116600--Sobic003G408600 Sobic010G116600--Sobic010G053800 Sobic010G053800--Sobic006G012500 Sobic010G053800--Sobic010G275500 Sobic010G053800--Sobic004G072100 Sobic010G053800--Sobic001G155000 Sobic003G187500 Sobic003G187500 Sobic010G053800--Sobic003G187500 Sobic010G053800--Sobic008G047800 Sobic010G053800--Sobic010G116600 Sobic006G163800 Sobic006G163800 Sobic010G053800--Sobic006G163800 Sobic004G039600 Sobic004G039600 Sobic010G053800--Sobic004G039600 Sobic001G306900 Sobic001G306900 Sobic004G138000--Sobic001G306900 Sobic004G138000--Sobic010G201500 Sobic004G138000--Sobic007G065400 Sobic004G145500 Sobic004G145500 Sobic004G138000--Sobic004G145500 Sobic004G138000--Sobic001G094000 Sobic008G009700 Sobic008G009700 Sobic004G138000--Sobic008G009700 Sobic004G138000--Sobic010G065300 Sobic001G511500 Sobic001G511500 Sobic004G138000--Sobic001G511500 Sobic008G063000 Sobic008G063000 Sobic004G138000--Sobic008G063000 Sobic006G037700 Sobic006G037700 Sobic006G035300--Sobic006G037700 Sobic006G035300--Sobic002G071500 Sobic005G118600 Sobic005G118600 Sobic006G035300--Sobic005G118600 Sobic003G059750 Sobic003G059750 Sobic006G035300--Sobic003G059750 Sobic001G065000 Sobic001G065000 Sobic006G035300--Sobic001G065000 Sobic006G035300--Sobic008G153000 Sobic006G035300--Sobic006G012500 Sobic006G035300--Sobic001G109800 Sobic003G147000 Sobic003G147000 Sobic006G035300--Sobic003G147000
Octagon: transcription factors


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