Gene annotation
Transcriptome id Sobic.001G504200.1
Synonym
Functional annotation HEAT repeat family protein, putative, expressed
UniProt A0A1B6QQI9
Pfam -
Panther DB PTHR23120 PTHR23120:SF20
NCBI CDD KOG2032; Uncharacterized conserved protein
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G36810 : ARM repeat superfamily protein
RAP-DB (Rice) LOC_Os03g05330.1 : HEAT repeat family protein, putative, expressed
MaizeGDB (Corn) Zm00025a000634
Brachypodium KQK23662
Barley HORVU4Hr1G079420.11 , HORVU4Hr1G079420.16 , HORVU4Hr1G079420.1 , HORVU4Hr1G079420.2 , HORVU4Hr1G079420.3 , HORVU4Hr1G079420.4 , HORVU4Hr1G079420.5 , HORVU4Hr1G079420.6 , HORVU4Hr1G079420.7 , HORVU4Hr1G079420.8 , HORVU4Hr1G079420.9 , HORVU4Hr1G079420.41 , HORVU4Hr1G079420.40 , HORVU4Hr1G079420.43 , HORVU4Hr1G079420.42 , HORVU4Hr1G079420.45 , HORVU4Hr1G079420.44 , HORVU4Hr1G079420.47 , HORVU4Hr1G079420.46 , HORVU4Hr1G079420.49 , HORVU4Hr1G079420.48 , HORVU4Hr1G079420.56 , HORVU4Hr1G079420.57 , HORVU4Hr1G079420.54 , HORVU4Hr1G079420.55 , HORVU4Hr1G079420.52 , HORVU4Hr1G079420.53 , HORVU4Hr1G079420.50 , HORVU4Hr1G079420.51 , HORVU4Hr1G079420.58 , HORVU4Hr1G079420.59 , HORVU4Hr1G079420.23 , HORVU4Hr1G079420.22 , HORVU4Hr1G079420.21 , HORVU4Hr1G079420.20 , HORVU4Hr1G079420.27 , HORVU4Hr1G079420.26 , HORVU4Hr1G079420.25 , HORVU4Hr1G079420.24 , HORVU4Hr1G079420.29 , HORVU4Hr1G079420.28 , HORVU4Hr1G079420.30 , HORVU4Hr1G079420.31 , HORVU4Hr1G079420.32 , HORVU4Hr1G079420.33 , HORVU4Hr1G079420.34 , HORVU4Hr1G079420.35 , HORVU4Hr1G079420.36 , HORVU4Hr1G079420.37 , HORVU4Hr1G079420.38 , HORVU4Hr1G079420.39 , HORVU3Hr1G069360.1 , HORVU4Hr1G079420.19 , HORVU4Hr1G079420.13 , HORVU4Hr1G079420.10 , HORVU4Hr1G079420.17 , HORVU4Hr1G079420.14 , HORVU4Hr1G079420.15 , HORVU4Hr1G079420.18 , HORVU4Hr1G079420.66 , HORVU4Hr1G079420.65 , HORVU4Hr1G079420.64 , HORVU4Hr1G079420.63 , HORVU4Hr1G079420.62 , HORVU4Hr1G079420.61 , HORVU4Hr1G079420.60 , HORVU4Hr1G079420.12
Wheat TraesCS4B02G311700 , TraesCS4D02G309500 , TraesCS4D02G309500 , TraesCS4A02G411600 , TraesCS4A02G411600
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G201500 zinc finger C-x8-C-x5-C-x3-H type family protein, expressed -
2 Sobic.006G046700 vacuolar protein sorting-associated protein 11, putative, expressed -
3 Sobic.008G153000 MATH domain containing protein, expressed -
4 Sobic.002G071500 cleavage and polyadenylation specificity factor, putative, expressed K12830: SF3B3, SAP130, splicing factor 3B subunit 3
5 Sobic.005G118600 NB-ARC domain containing protein, expressed -
6 Sobic.008G084700 - -
7 Sobic.001G306900 tetratricopeptide repeat domain containing protein, expressed K12600: SKI3, superkiller protein 3
8 Sobic.004G246100 nicalin, putative, expressed K06171: nicastrin
9 Sobic.004G031700 expressed protein -
10 Sobic.004G138000 expressed protein -
11 Sobic.009G083900 C-5 cytosine-specific DNA methylase, putative, expressed K00558: DNMT1, DNA (cytosine-5)-methyltransferase 1
12 Sobic.003G225700 - -
13 Sobic.006G028200 glycine-rich protein, putative, expressed -
14 Sobic.003G036900 glycine-rich protein, putative, expressed -
15 Sobic.002G058400 disease resistance protein RPM1, putative, expressed K13457: RPM1, disease resistance protein RPM1
16 Sobic.007G061700 vacuolar protein sorting-associated protein 18, putative, expressed -
17 Sobic.010G065300 expressed protein K11643: CHD4, chromodomain-helicase-DNA-binding protein 4
18 Sobic.001G080900 heat shock protein DnaJ, putative, expressed -
19 Sobic.008G024600 expressed protein -
20 Sobic.002G158700 TATA binding protein-associated factor, putative, expressed K03131: transcription initiation factor TFIID subunit 6


Gene co-expression network
sample Sobic001G504200 Sobic001G504200 Sobic010G201500 Sobic010G201500 Sobic001G504200--Sobic010G201500 Sobic006G046700 Sobic006G046700 Sobic001G504200--Sobic006G046700 Sobic008G153000 Sobic008G153000 Sobic001G504200--Sobic008G153000 Sobic002G071500 Sobic002G071500 Sobic001G504200--Sobic002G071500 Sobic005G118600 Sobic005G118600 Sobic001G504200--Sobic005G118600 Sobic008G084700 Sobic008G084700 Sobic001G504200--Sobic008G084700 Sobic001G306900 Sobic001G306900 Sobic001G504200--Sobic001G306900 Sobic004G246100 Sobic004G246100 Sobic001G504200--Sobic004G246100 Sobic004G031700 Sobic004G031700 Sobic001G504200--Sobic004G031700 Sobic010G201500--Sobic002G071500 Sobic007G065400 Sobic007G065400 Sobic010G201500--Sobic007G065400 Sobic004G271000 Sobic004G271000 Sobic010G201500--Sobic004G271000 Sobic003G372700 Sobic003G372700 Sobic010G201500--Sobic003G372700 Sobic002G006900 Sobic002G006900 Sobic010G201500--Sobic002G006900 Sobic002G191800 Sobic002G191800 Sobic010G201500--Sobic002G191800 Sobic010G065300 Sobic010G065300 Sobic010G201500--Sobic010G065300 Sobic010G069100 Sobic010G069100 Sobic010G201500--Sobic010G069100 Sobic001G155000 Sobic001G155000 Sobic010G201500--Sobic001G155000 Sobic006G046700--Sobic008G153000 Sobic006G046700--Sobic004G031700 Sobic007G026000 Sobic007G026000 Sobic006G046700--Sobic007G026000 Sobic001G206100 Sobic001G206100 Sobic006G046700--Sobic001G206100 Sobic006G046700--Sobic001G306900 Sobic003G445400 Sobic003G445400 Sobic006G046700--Sobic003G445400 Sobic001G425000 Sobic001G425000 Sobic006G046700--Sobic001G425000 Sobic001G405300 Sobic001G405300 Sobic006G046700--Sobic001G405300 Sobic006G013500 Sobic006G013500 Sobic006G046700--Sobic006G013500 Sobic006G116100 Sobic006G116100 Sobic008G153000--Sobic006G116100 Sobic008G153000--Sobic006G046700 Sobic008G149800 Sobic008G149800 Sobic008G153000--Sobic008G149800 Sobic002G264200 Sobic002G264200 Sobic008G153000--Sobic002G264200 Sobic008G153000--Sobic001G155000 Sobic008G153000--Sobic003G445400 Sobic003G059750 Sobic003G059750 Sobic008G153000--Sobic003G059750 Sobic008G153000--Sobic007G026000 Sobic008G153000--Sobic010G069100 Sobic005G112300 Sobic005G112300 Sobic002G071500--Sobic005G112300 Sobic003G408600 Sobic003G408600 Sobic002G071500--Sobic003G408600 Sobic008G009700 Sobic008G009700 Sobic002G071500--Sobic008G009700 Sobic010G116600 Sobic010G116600 Sobic002G071500--Sobic010G116600 Sobic001G026200 Sobic001G026200 Sobic002G071500--Sobic001G026200 Sobic002G153700 Sobic002G153700 Sobic002G071500--Sobic002G153700 Sobic002G071500--Sobic010G069100 Sobic003G119000 Sobic003G119000 Sobic002G071500--Sobic003G119000 Sobic002G071500--Sobic010G201500 Sobic005G118600--Sobic003G059750 Sobic005G118600--Sobic008G084700 Sobic003G225700 Sobic003G225700 Sobic005G118600--Sobic003G225700 Sobic001G065000 Sobic001G065000 Sobic005G118600--Sobic001G065000 Sobic009G166300 Sobic009G166300 Sobic005G118600--Sobic009G166300 Sobic005G118600--Sobic008G153000 Sobic001G114000 Sobic001G114000 Sobic005G118600--Sobic001G114000 Sobic005G118600--Sobic002G071500 Sobic007G103600 Sobic007G103600 Sobic005G118600--Sobic007G103600 Sobic009G104201 Sobic009G104201 Sobic008G084700--Sobic009G104201 Sobic008G084700--Sobic003G372700 Sobic008G084700--Sobic005G118600 Sobic004G007100 Sobic004G007100 Sobic008G084700--Sobic004G007100 Sobic009G086900 Sobic009G086900 Sobic008G084700--Sobic009G086900 Sobic002G180666 Sobic002G180666 Sobic008G084700--Sobic002G180666 Sobic006G032500 Sobic006G032500 Sobic008G084700--Sobic006G032500 Sobic002G243900 Sobic002G243900 Sobic008G084700--Sobic002G243900 Sobic008G084700--Sobic003G225700 Sobic004G138000 Sobic004G138000 Sobic001G306900--Sobic004G138000 Sobic001G306900--Sobic010G065300 Sobic001G303675 Sobic001G303675 Sobic001G306900--Sobic001G303675 Sobic001G306900--Sobic007G065400 Sobic001G511500 Sobic001G511500 Sobic001G306900--Sobic001G511500 Sobic004G145500 Sobic004G145500 Sobic001G306900--Sobic004G145500 Sobic001G306900--Sobic002G153700 Sobic001G306900--Sobic006G013500 Sobic001G094000 Sobic001G094000 Sobic001G306900--Sobic001G094000 Sobic004G246100--Sobic008G149800 Sobic004G246100--Sobic008G153000 Sobic007G061700 Sobic007G061700 Sobic004G246100--Sobic007G061700 Sobic002G063900 Sobic002G063900 Sobic004G246100--Sobic002G063900 Sobic008G173100 Sobic008G173100 Sobic004G246100--Sobic008G173100 Sobic004G246100--Sobic006G116100 Sobic004G246100--Sobic006G046700 Sobic009G137100 Sobic009G137100 Sobic004G246100--Sobic009G137100 Sobic002G260400 Sobic002G260400 Sobic004G246100--Sobic002G260400 Sobic009G000500 Sobic009G000500 Sobic004G031700--Sobic009G000500 Sobic004G031700--Sobic003G445400 Sobic001G544200 Sobic001G544200 Sobic004G031700--Sobic001G544200 Sobic001G477800 Sobic001G477800 Sobic004G031700--Sobic001G477800 Sobic006G080300 Sobic006G080300 Sobic004G031700--Sobic006G080300 Sobic006G128900 Sobic006G128900 Sobic004G031700--Sobic006G128900 Sobic004G031700--Sobic001G094000 Sobic004G031700--Sobic001G511500 Sobic002G158700 Sobic002G158700 Sobic004G031700--Sobic002G158700
Octagon: transcription factors


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