Gene annotation
Transcriptome id Sobic.002G058400.1
Synonym Sb02g004900, RPS3, RPM1
Functional annotation disease resistance protein RPM1, putative, expressed
UniProt C5XB77
Pfam PF13855 PF00931
Panther DB PTHR23155 PTHR23155:SF558
NCBI CDD KOG4658; Apoptotic ATPase
KEGG Orthology K13457; RPM1, disease resistance protein RPM1
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT3G07040 : NB-ARC domain-containing disease resistance protein
RAP-DB (Rice) LOC_Os07g08890.1 : disease resistance protein RPM1, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G267800 ranBP1 domain containing protein, expressed K15304: Ran-binding protein 3
2 Sobic.001G504200 HEAT repeat family protein, putative, expressed -
3 Sobic.005G133500 expressed protein -
4 Sobic.009G135800 CUE domain containing protein, expressed -
5 Sobic.004G223600 transcription factor-related, putative, expressed K15199: general transcription factor 3C polypeptide 1
6 Sobic.004G246100 nicalin, putative, expressed K06171: nicastrin
7 Sobic.006G245400 -(PubMedID : 34525227)@NADPH reductase, putative, expressed K00327: NADPH-ferrihemoprotein reductase
8 Sobic.002G396000 XPA-binding protein 2, putative, expressed K12867: SYF1, pre-mRNA-splicing factor SYF1
9 Sobic.001G509500 glutamyl-tRNA synthetase, cytoplasmic, putative, expressed K01885: EARS, glutamyl-tRNA synthetase
10 Sobic.001G142100 WD domain, G-beta repeat domain containing protein, expressed K04536: guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1
11 Sobic.010G209400 WD domain, G-beta repeat domain containing protein, expressed K03130: transcription initiation factor TFIID subunit 5
12 Sobic.002G158700 TATA binding protein-associated factor, putative, expressed K03131: transcription initiation factor TFIID subunit 6
13 Sobic.008G131000 domain of unknown function family protein, expressed -
14 Sobic.007G225200 2-nitropropane dioxygenase family, putative, expressed -
15 Sobic.007G172400 AAA-type ATPase family protein, putative, expressed K13338: peroxin-1
16 Sobic.001G138400 crooked neck, putative, expressed K12869: CRN, CRNKL1, CLF1, crooked neck
17 Sobic.001G017600 protein of unknown function containing protein, expressed -
18 Sobic.001G511500 RNA recognition motif containing protein, putative, expressed K12837: splicing factor U2AF 65 kDa subunit
19 Sobic.007G041500 diacylglycerol kinase, putative, expressed -
20 Sobic.001G219900 expressed protein -


Gene co-expression network
sample Sobic002G058400 Sobic002G058400 Sobic003G267800 Sobic003G267800 Sobic002G058400--Sobic003G267800 Sobic001G504200 Sobic001G504200 Sobic002G058400--Sobic001G504200 Sobic005G133500 Sobic005G133500 Sobic002G058400--Sobic005G133500 Sobic009G135800 Sobic009G135800 Sobic002G058400--Sobic009G135800 Sobic004G223600 Sobic004G223600 Sobic002G058400--Sobic004G223600 Sobic004G246100 Sobic004G246100 Sobic002G058400--Sobic004G246100 Sobic006G245400 Sobic006G245400 Sobic002G058400--Sobic006G245400 Sobic002G396000 Sobic002G396000 Sobic002G058400--Sobic002G396000 Sobic001G509500 Sobic001G509500 Sobic002G058400--Sobic001G509500 Sobic003G267800--Sobic005G133500 Sobic003G258900 Sobic003G258900 Sobic003G267800--Sobic003G258900 Sobic003G267800--Sobic002G058400 Sobic003G239900 Sobic003G239900 Sobic003G267800--Sobic003G239900 Sobic009G175900 Sobic009G175900 Sobic003G267800--Sobic009G175900 Sobic002G158700 Sobic002G158700 Sobic003G267800--Sobic002G158700 Sobic003G440700 Sobic003G440700 Sobic003G267800--Sobic003G440700 Sobic006G217200 Sobic006G217200 Sobic003G267800--Sobic006G217200 Sobic003G267800--Sobic002G396000 Sobic010G201500 Sobic010G201500 Sobic001G504200--Sobic010G201500 Sobic006G046700 Sobic006G046700 Sobic001G504200--Sobic006G046700 Sobic008G153000 Sobic008G153000 Sobic001G504200--Sobic008G153000 Sobic002G071500 Sobic002G071500 Sobic001G504200--Sobic002G071500 Sobic005G118600 Sobic005G118600 Sobic001G504200--Sobic005G118600 Sobic008G084700 Sobic008G084700 Sobic001G504200--Sobic008G084700 Sobic001G306900 Sobic001G306900 Sobic001G504200--Sobic001G306900 Sobic001G504200--Sobic004G246100 Sobic004G031700 Sobic004G031700 Sobic001G504200--Sobic004G031700 Sobic009G151200 Sobic009G151200 Sobic005G133500--Sobic009G151200 Sobic002G423200 Sobic002G423200 Sobic005G133500--Sobic002G423200 Sobic005G133500--Sobic003G267800 Sobic002G259800 Sobic002G259800 Sobic005G133500--Sobic002G259800 Sobic005G133500--Sobic006G217200 Sobic008G131000 Sobic008G131000 Sobic005G133500--Sobic008G131000 Sobic005G133500--Sobic004G246100 Sobic010G236400 Sobic010G236400 Sobic005G133500--Sobic010G236400 Sobic001G080900 Sobic001G080900 Sobic005G133500--Sobic001G080900 Sobic009G135800--Sobic004G031700 Sobic002G340100 Sobic002G340100 Sobic009G135800--Sobic002G340100 Sobic008G024600 Sobic008G024600 Sobic009G135800--Sobic008G024600 Sobic006G128900 Sobic006G128900 Sobic009G135800--Sobic006G128900 Sobic002G053000 Sobic002G053000 Sobic009G135800--Sobic002G053000 Sobic003G445400 Sobic003G445400 Sobic009G135800--Sobic003G445400 Sobic009G135800--Sobic002G158700 Sobic006G173100 Sobic006G173100 Sobic009G135800--Sobic006G173100 Sobic009G000500 Sobic009G000500 Sobic009G135800--Sobic009G000500 Sobic001G219900 Sobic001G219900 Sobic004G223600--Sobic001G219900 Sobic001G214600 Sobic001G214600 Sobic004G223600--Sobic001G214600 Sobic002G317200 Sobic002G317200 Sobic004G223600--Sobic002G317200 Sobic003G307000 Sobic003G307000 Sobic004G223600--Sobic003G307000 Sobic007G042400 Sobic007G042400 Sobic004G223600--Sobic007G042400 Sobic009G247400 Sobic009G247400 Sobic004G223600--Sobic009G247400 Sobic001G311500 Sobic001G311500 Sobic004G223600--Sobic001G311500 Sobic004G223600--Sobic002G071500 Sobic003G152400 Sobic003G152400 Sobic004G223600--Sobic003G152400 Sobic008G149800 Sobic008G149800 Sobic004G246100--Sobic008G149800 Sobic004G246100--Sobic008G153000 Sobic007G061700 Sobic007G061700 Sobic004G246100--Sobic007G061700 Sobic002G063900 Sobic002G063900 Sobic004G246100--Sobic002G063900 Sobic008G173100 Sobic008G173100 Sobic004G246100--Sobic008G173100 Sobic006G116100 Sobic006G116100 Sobic004G246100--Sobic006G116100 Sobic004G246100--Sobic006G046700 Sobic009G137100 Sobic009G137100 Sobic004G246100--Sobic009G137100 Sobic002G260400 Sobic002G260400 Sobic004G246100--Sobic002G260400 Sobic006G245400--Sobic002G340100 Sobic007G172400 Sobic007G172400 Sobic006G245400--Sobic007G172400 Sobic004G052900 Sobic004G052900 Sobic006G245400--Sobic004G052900 Sobic004G113400 Sobic004G113400 Sobic006G245400--Sobic004G113400 Sobic001G114000 Sobic001G114000 Sobic006G245400--Sobic001G114000 Sobic006G237400 Sobic006G237400 Sobic006G245400--Sobic006G237400 Sobic007G217000 Sobic007G217000 Sobic006G245400--Sobic007G217000 Sobic001G065000 Sobic001G065000 Sobic006G245400--Sobic001G065000 Sobic001G474600 Sobic001G474600 Sobic006G245400--Sobic001G474600 Sobic002G396000--Sobic002G158700 Sobic002G396000--Sobic006G128900 Sobic007G096000 Sobic007G096000 Sobic002G396000--Sobic007G096000 Sobic003G280800 Sobic003G280800 Sobic002G396000--Sobic003G280800 Sobic001G511500 Sobic001G511500 Sobic002G396000--Sobic001G511500 Sobic009G210500 Sobic009G210500 Sobic002G396000--Sobic009G210500 Sobic004G018300 Sobic004G018300 Sobic002G396000--Sobic004G018300 Sobic002G396000--Sobic008G131000 Sobic001G090400 Sobic001G090400 Sobic002G396000--Sobic001G090400 Sobic003G004300 Sobic003G004300 Sobic001G509500--Sobic003G004300 Sobic008G098300 Sobic008G098300 Sobic001G509500--Sobic008G098300 Sobic006G182200 Sobic006G182200 Sobic001G509500--Sobic006G182200 Sobic003G188500 Sobic003G188500 Sobic001G509500--Sobic003G188500 Sobic001G008200 Sobic001G008200 Sobic001G509500--Sobic001G008200 Sobic004G264400 Sobic004G264400 Sobic001G509500--Sobic004G264400 Sobic009G056200 Sobic009G056200 Sobic001G509500--Sobic009G056200 Sobic004G048800 Sobic004G048800 Sobic001G509500--Sobic004G048800 Sobic006G200700 Sobic006G200700 Sobic001G509500--Sobic006G200700
Octagon: transcription factors


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