Gene annotation
Transcriptome id Sobic.005G133500.1
Synonym Sb05g019760
Functional annotation expressed protein
UniProt C5Y3B9
Pfam -
Panther DB PTHR32212 PTHR32212:SF133
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G56690 : FBD, F-box and Leucine Rich Repeat domains containing protein
RAP-DB (Rice) LOC_Os11g32360.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat TraesCS2B02G183000
Populus -


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cDNA sequences
Sobic.005G133500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G151200 expressed protein -
2 Sobic.002G423200 importin subunit alpha-1b, putative, expressed -
3 Sobic.003G267800 ranBP1 domain containing protein, expressed K15304: Ran-binding protein 3
4 Sobic.002G259800 hydroxyproline-rich glycoprotein family protein, putative, expressed -
5 Sobic.006G217200 PPR repeat domain containing protein, putative, expressed -
6 Sobic.008G131000 domain of unknown function family protein, expressed -
7 Sobic.004G246100 nicalin, putative, expressed K06171: nicastrin
8 Sobic.010G236400 ubiquitin carboxyl-terminal hydrolase domain containing protein, expressed K12847: USP39, U4/U6.U5 tri-snRNP-associated protein 2
9 Sobic.001G080900 heat shock protein DnaJ, putative, expressed -
10 Sobic.003G440700 leucine rich repeat domain containing protein, putative, expressed -
11 Sobic.001G010300 WD domain, G-beta repeat domain containing protein, expressed -
12 Sobic.003G289400 farnesyltransferase subunit beta, putative, expressed K05954: protein farnesyltransferase subunit beta
13 Sobic.002G058400 disease resistance protein RPM1, putative, expressed K13457: RPM1, disease resistance protein RPM1
14 Sobic.001G142100 WD domain, G-beta repeat domain containing protein, expressed K04536: guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1
15 Sobic.006G173100 pre-mRNA-processing factor 31, putative, expressed K12844: U4/U6 small nuclear ribonucleoprotein PRP31
16 Sobic.001G306900 tetratricopeptide repeat domain containing protein, expressed K12600: SKI3, superkiller protein 3
17 Sobic.009G088000 expressed protein -
18 Sobic.007G000800 expressed protein -
19 Sobic.002G158700 TATA binding protein-associated factor, putative, expressed K03131: transcription initiation factor TFIID subunit 6
20 Sobic.001G066300 cell cycle control protein, putative, expressed -


Gene co-expression network
sample Sobic005G133500 Sobic005G133500 Sobic009G151200 Sobic009G151200 Sobic005G133500--Sobic009G151200 Sobic002G423200 Sobic002G423200 Sobic005G133500--Sobic002G423200 Sobic003G267800 Sobic003G267800 Sobic005G133500--Sobic003G267800 Sobic002G259800 Sobic002G259800 Sobic005G133500--Sobic002G259800 Sobic006G217200 Sobic006G217200 Sobic005G133500--Sobic006G217200 Sobic008G131000 Sobic008G131000 Sobic005G133500--Sobic008G131000 Sobic004G246100 Sobic004G246100 Sobic005G133500--Sobic004G246100 Sobic010G236400 Sobic010G236400 Sobic005G133500--Sobic010G236400 Sobic001G080900 Sobic001G080900 Sobic005G133500--Sobic001G080900 Sobic006G248500 Sobic006G248500 Sobic009G151200--Sobic006G248500 Sobic009G151200--Sobic002G259800 Sobic009G151200--Sobic005G133500 Sobic004G285000 Sobic004G285000 Sobic009G151200--Sobic004G285000 Sobic001G424600 Sobic001G424600 Sobic009G151200--Sobic001G424600 Sobic004G085300 Sobic004G085300 Sobic009G151200--Sobic004G085300 Sobic008G100100 Sobic008G100100 Sobic009G151200--Sobic008G100100 Sobic004G086200 Sobic004G086200 Sobic009G151200--Sobic004G086200 Sobic004G156500 Sobic004G156500 Sobic009G151200--Sobic004G156500 Sobic002G423200--Sobic002G259800 Sobic002G423200--Sobic005G133500 Sobic002G423200--Sobic004G246100 Sobic002G423200--Sobic006G248500 Sobic008G127400 Sobic008G127400 Sobic002G423200--Sobic008G127400 Sobic002G423200--Sobic010G236400 Sobic003G353600 Sobic003G353600 Sobic002G423200--Sobic003G353600 Sobic001G138400 Sobic001G138400 Sobic002G423200--Sobic001G138400 Sobic006G138000 Sobic006G138000 Sobic002G423200--Sobic006G138000 Sobic003G267800--Sobic005G133500 Sobic003G258900 Sobic003G258900 Sobic003G267800--Sobic003G258900 Sobic002G058400 Sobic002G058400 Sobic003G267800--Sobic002G058400 Sobic003G239900 Sobic003G239900 Sobic003G267800--Sobic003G239900 Sobic009G175900 Sobic009G175900 Sobic003G267800--Sobic009G175900 Sobic002G158700 Sobic002G158700 Sobic003G267800--Sobic002G158700 Sobic003G440700 Sobic003G440700 Sobic003G267800--Sobic003G440700 Sobic003G267800--Sobic006G217200 Sobic002G396000 Sobic002G396000 Sobic003G267800--Sobic002G396000 Sobic009G195200 Sobic009G195200 Sobic002G259800--Sobic009G195200 Sobic001G306900 Sobic001G306900 Sobic002G259800--Sobic001G306900 Sobic005G015900 Sobic005G015900 Sobic002G259800--Sobic005G015900 Sobic003G394300 Sobic003G394300 Sobic002G259800--Sobic003G394300 Sobic002G259800--Sobic006G248500 Sobic001G246500 Sobic001G246500 Sobic002G259800--Sobic001G246500 Sobic005G084100 Sobic005G084100 Sobic002G259800--Sobic005G084100 Sobic002G259800--Sobic002G423200 Sobic002G259800--Sobic004G156500 Sobic001G454301 Sobic001G454301 Sobic006G217200--Sobic001G454301 Sobic002G421700 Sobic002G421700 Sobic006G217200--Sobic002G421700 Sobic006G217200--Sobic005G133500 Sobic006G217200--Sobic002G259800 Sobic007G000800 Sobic007G000800 Sobic006G217200--Sobic007G000800 Sobic006G217200--Sobic003G239900 Sobic006G217200--Sobic009G151200 Sobic005G009200 Sobic005G009200 Sobic006G217200--Sobic005G009200 Sobic006G013500 Sobic006G013500 Sobic006G217200--Sobic006G013500 Sobic008G131000--Sobic010G236400 Sobic008G083000 Sobic008G083000 Sobic008G131000--Sobic008G083000 Sobic003G266001 Sobic003G266001 Sobic008G131000--Sobic003G266001 Sobic008G131000--Sobic002G396000 Sobic010G209400 Sobic010G209400 Sobic008G131000--Sobic010G209400 Sobic003G401100 Sobic003G401100 Sobic008G131000--Sobic003G401100 Sobic006G194400 Sobic006G194400 Sobic008G131000--Sobic006G194400 Sobic004G084300 Sobic004G084300 Sobic008G131000--Sobic004G084300 Sobic003G187500 Sobic003G187500 Sobic008G131000--Sobic003G187500 Sobic008G149800 Sobic008G149800 Sobic004G246100--Sobic008G149800 Sobic008G153000 Sobic008G153000 Sobic004G246100--Sobic008G153000 Sobic007G061700 Sobic007G061700 Sobic004G246100--Sobic007G061700 Sobic002G063900 Sobic002G063900 Sobic004G246100--Sobic002G063900 Sobic008G173100 Sobic008G173100 Sobic004G246100--Sobic008G173100 Sobic006G116100 Sobic006G116100 Sobic004G246100--Sobic006G116100 Sobic006G046700 Sobic006G046700 Sobic004G246100--Sobic006G046700 Sobic009G137100 Sobic009G137100 Sobic004G246100--Sobic009G137100 Sobic002G260400 Sobic002G260400 Sobic004G246100--Sobic002G260400 Sobic010G236400--Sobic004G084300 Sobic002G264200 Sobic002G264200 Sobic010G236400--Sobic002G264200 Sobic010G069100 Sobic010G069100 Sobic010G236400--Sobic010G069100 Sobic002G126500 Sobic002G126500 Sobic010G236400--Sobic002G126500 Sobic004G274200 Sobic004G274200 Sobic010G236400--Sobic004G274200 Sobic010G116600 Sobic010G116600 Sobic010G236400--Sobic010G116600 Sobic007G183900 Sobic007G183900 Sobic010G236400--Sobic007G183900 Sobic002G071500 Sobic002G071500 Sobic010G236400--Sobic002G071500 Sobic010G236400--Sobic003G401100 Sobic001G080900--Sobic005G133500 Sobic001G504200 Sobic001G504200 Sobic001G080900--Sobic001G504200 Sobic010G201500 Sobic010G201500 Sobic001G080900--Sobic010G201500 Sobic001G080900--Sobic008G153000 Sobic008G084700 Sobic008G084700 Sobic001G080900--Sobic008G084700 Sobic001G080900--Sobic002G423200 Sobic007G026000 Sobic007G026000 Sobic001G080900--Sobic007G026000 Sobic004G138000 Sobic004G138000 Sobic001G080900--Sobic004G138000 Sobic001G080900--Sobic009G151200
Octagon: transcription factors


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