Gene annotation
Transcriptome id Sobic.006G035300.3,Sobic.006G035300.1,Sobic.006G035300.2
Synonym Sb06g004530
Functional annotation expressed protein
UniProt A0A1Z5RBY2 , C5YDN1 , A0A1Z5RCV2
Pfam PF09758
Panther DB PTHR21481 PTHR21481 PTHR21481:SF0
NCBI CDD KOG2219; Uncharacterized conserved protein
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G28430 : -
RAP-DB (Rice) LOC_Os04g23210.1 : expressed protein
MaizeGDB (Corn) Zm00025a055778
Brachypodium KQJ82044 , KQJ82045 , KQJ82043 , PNT60800
Barley HORVU2Hr1G065910.13 , HORVU2Hr1G065910.11 , HORVU2Hr1G065910.10 , HORVU2Hr1G065910.16 , HORVU2Hr1G065910.15 , HORVU2Hr1G065910.14 , HORVU2Hr1G065910.12 , HORVU2Hr1G065910.3 , HORVU2Hr1G065910.2 , HORVU2Hr1G065910.1 , HORVU2Hr1G065910.7 , HORVU2Hr1G065910.6 , HORVU2Hr1G065910.5 , HORVU2Hr1G065910.4 , HORVU2Hr1G065910.9 , HORVU2Hr1G065910.8
Wheat TraesCS2B02G289500 , TraesCS2B02G289500 , TraesCS2B02G289500 , TraesCS2B02G289500 , TraesCS2B02G289500 , TraesCS2B02G289500 , TraesCS2B02G289500 , TraesCS2B02G289500 , TraesCS2D02G269800 , TraesCS2D02G269800 , TraesCS2D02G269800 , TraesCS2D02G269800 , TraesCS2D02G269800 , TraesCS2D02G269800 , TraesCS2D02G269800 , TraesCS2D02G269800 , TraesCS2D02G269800 , TraesCS2A02G270700 , TraesCS2A02G270700 , TraesCS2A02G270700 , TraesCS2A02G270700 , TraesCS2A02G270700 , TraesCS2A02G270700 , TraesCS2A02G270700 , TraesCS2A02G270700
Populus PNT30286 , PNT30285 , PNT30284 , PNS94322 , PNS94321


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cDNA sequences
Sobic.006G035300


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G037700 phosphoribulokinase/Uridine kinase family protein, expressed -
2 Sobic.002G071500 cleavage and polyadenylation specificity factor, putative, expressed K12830: SF3B3, SAP130, splicing factor 3B subunit 3
3 Sobic.005G118600 NB-ARC domain containing protein, expressed -
4 Sobic.003G059750 - K11797: PHIP, PH-interacting protein
5 Sobic.001G065000 expressed protein -
6 Sobic.008G153000 MATH domain containing protein, expressed -
7 Sobic.006G012500 protein transport protein Sec24-like, putative, expressed K14007: protein transport protein SEC24
8 Sobic.001G109800 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C member, putative, expressed K11649: SWI/SNF related-matrix-associated actin-dependent regulator of chromatin subfamily C
9 Sobic.003G147000 phospholipase D p1, putative, expressed K01115: phospholipase D1/2
10 Sobic.004G051200 WD domain containing protein, putative, expressed -
11 Sobic.001G114000 expressed protein -
12 Sobic.009G166300 HECT-domain domain containing protein, expressed K10590: E3 ubiquitin-protein ligase TRIP12
13 Sobic.003G036900 glycine-rich protein, putative, expressed -
14 Sobic.010G069100 expressed protein -
15 Sobic.004G072100 centromere/kinetochore protein zw10, putative, expressed K11578: ZW10, protein transport protein DSL1/ZW10
16 Sobic.007G103600 protein of unknown function DUF1296 domain containing protein, expressed -
17 Sobic.007G217000 tetratricopeptide repeat domain containing protein, expressed K13342: PEX5, peroxin-5
18 Sobic.010G053800 AP-1 complex subunit gamma-1, putative, expressed K12391: AP-1 complex subunit gamma-1
19 Sobic.010G116600 FHA domain containing protein, putative, expressed -
20 Sobic.001G155000 DNA-directed RNA polymerase II subunit RPB2, putative, expressed K03010: RPB2, DNA-directed RNA polymerase II subunit RPB2


Gene co-expression network
sample Sobic006G035300 Sobic006G035300 Sobic006G037700 Sobic006G037700 Sobic006G035300--Sobic006G037700 Sobic002G071500 Sobic002G071500 Sobic006G035300--Sobic002G071500 Sobic005G118600 Sobic005G118600 Sobic006G035300--Sobic005G118600 Sobic003G059750 Sobic003G059750 Sobic006G035300--Sobic003G059750 Sobic001G065000 Sobic001G065000 Sobic006G035300--Sobic001G065000 Sobic008G153000 Sobic008G153000 Sobic006G035300--Sobic008G153000 Sobic006G012500 Sobic006G012500 Sobic006G035300--Sobic006G012500 Sobic001G109800 Sobic001G109800 Sobic006G035300--Sobic001G109800 Sobic003G147000 Sobic003G147000 Sobic006G035300--Sobic003G147000 Sobic004G051200 Sobic004G051200 Sobic006G037700--Sobic004G051200 Sobic006G037700--Sobic001G065000 Sobic008G099800 Sobic008G099800 Sobic006G037700--Sobic008G099800 Sobic003G072200 Sobic003G072200 Sobic006G037700--Sobic003G072200 Sobic007G098500 Sobic007G098500 Sobic006G037700--Sobic007G098500 Sobic006G037700--Sobic006G035300 Sobic001G050600 Sobic001G050600 Sobic006G037700--Sobic001G050600 Sobic003G259100 Sobic003G259100 Sobic006G037700--Sobic003G259100 Sobic001G058700 Sobic001G058700 Sobic006G037700--Sobic001G058700 Sobic005G112300 Sobic005G112300 Sobic002G071500--Sobic005G112300 Sobic003G408600 Sobic003G408600 Sobic002G071500--Sobic003G408600 Sobic008G009700 Sobic008G009700 Sobic002G071500--Sobic008G009700 Sobic010G116600 Sobic010G116600 Sobic002G071500--Sobic010G116600 Sobic001G026200 Sobic001G026200 Sobic002G071500--Sobic001G026200 Sobic002G153700 Sobic002G153700 Sobic002G071500--Sobic002G153700 Sobic010G069100 Sobic010G069100 Sobic002G071500--Sobic010G069100 Sobic003G119000 Sobic003G119000 Sobic002G071500--Sobic003G119000 Sobic010G201500 Sobic010G201500 Sobic002G071500--Sobic010G201500 Sobic005G118600--Sobic003G059750 Sobic008G084700 Sobic008G084700 Sobic005G118600--Sobic008G084700 Sobic003G225700 Sobic003G225700 Sobic005G118600--Sobic003G225700 Sobic005G118600--Sobic001G065000 Sobic009G166300 Sobic009G166300 Sobic005G118600--Sobic009G166300 Sobic005G118600--Sobic008G153000 Sobic001G114000 Sobic001G114000 Sobic005G118600--Sobic001G114000 Sobic005G118600--Sobic002G071500 Sobic007G103600 Sobic007G103600 Sobic005G118600--Sobic007G103600 Sobic003G059750--Sobic007G103600 Sobic005G207500 Sobic005G207500 Sobic003G059750--Sobic005G207500 Sobic003G059750--Sobic005G112300 Sobic010G279450 Sobic010G279450 Sobic003G059750--Sobic010G279450 Sobic002G404700 Sobic002G404700 Sobic003G059750--Sobic002G404700 Sobic003G444800 Sobic003G444800 Sobic003G059750--Sobic003G444800 Sobic001G311500 Sobic001G311500 Sobic003G059750--Sobic001G311500 Sobic002G405800 Sobic002G405800 Sobic003G059750--Sobic002G405800 Sobic003G059750--Sobic002G071500 Sobic001G065000--Sobic001G114000 Sobic001G281100 Sobic001G281100 Sobic001G065000--Sobic001G281100 Sobic001G065000--Sobic006G012500 Sobic001G534800 Sobic001G534800 Sobic001G065000--Sobic001G534800 Sobic001G065000--Sobic005G118600 Sobic001G065000--Sobic008G099800 Sobic003G093800 Sobic003G093800 Sobic001G065000--Sobic003G093800 Sobic001G065000--Sobic006G037700 Sobic003G229500 Sobic003G229500 Sobic001G065000--Sobic003G229500 Sobic006G116100 Sobic006G116100 Sobic008G153000--Sobic006G116100 Sobic006G046700 Sobic006G046700 Sobic008G153000--Sobic006G046700 Sobic008G149800 Sobic008G149800 Sobic008G153000--Sobic008G149800 Sobic002G264200 Sobic002G264200 Sobic008G153000--Sobic002G264200 Sobic001G155000 Sobic001G155000 Sobic008G153000--Sobic001G155000 Sobic003G445400 Sobic003G445400 Sobic008G153000--Sobic003G445400 Sobic008G153000--Sobic003G059750 Sobic007G026000 Sobic007G026000 Sobic008G153000--Sobic007G026000 Sobic008G153000--Sobic010G069100 Sobic004G039600 Sobic004G039600 Sobic006G012500--Sobic004G039600 Sobic010G053800 Sobic010G053800 Sobic006G012500--Sobic010G053800 Sobic006G012500--Sobic008G099800 Sobic010G275500 Sobic010G275500 Sobic006G012500--Sobic010G275500 Sobic004G072100 Sobic004G072100 Sobic006G012500--Sobic004G072100 Sobic006G012500--Sobic001G534800 Sobic006G012500--Sobic001G065000 Sobic007G132100 Sobic007G132100 Sobic006G012500--Sobic007G132100 Sobic007G218000 Sobic007G218000 Sobic006G012500--Sobic007G218000 Sobic004G146500 Sobic004G146500 Sobic001G109800--Sobic004G146500 Sobic004G264400 Sobic004G264400 Sobic001G109800--Sobic004G264400 Sobic002G297200 Sobic002G297200 Sobic001G109800--Sobic002G297200 Sobic007G119200 Sobic007G119200 Sobic001G109800--Sobic007G119200 Sobic001G109800--Sobic009G166300 Sobic001G409600 Sobic001G409600 Sobic001G109800--Sobic001G409600 Sobic001G109800--Sobic002G071500 Sobic001G220300 Sobic001G220300 Sobic001G109800--Sobic001G220300 Sobic009G026500 Sobic009G026500 Sobic001G109800--Sobic009G026500 Sobic003G147000--Sobic001G065000 Sobic003G147000--Sobic005G118600 Sobic003G147000--Sobic008G153000 Sobic003G147000--Sobic006G035300 Sobic003G147000--Sobic007G218000 Sobic003G147000--Sobic006G037700 Sobic009G249700 Sobic009G249700 Sobic003G147000--Sobic009G249700 Sobic003G147000--Sobic003G259100 Sobic002G112700 Sobic002G112700 Sobic003G147000--Sobic002G112700
Octagon: transcription factors


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