Gene annotation
Transcriptome id Sobic.003G147000.2,Sobic.003G147000.1
Synonym PLDZ1, Sb03g012720, PLDZETA1, PLDP1
Functional annotation phospholipase D p1, putative, expressed
UniProt A0A1B6Q391 , A0A1B6Q390
Pfam PF00787 PF00169 PF13091 PF00614 PF00169 PF13091 PF00614
Panther DB PTHR18896 PTHR18896:SF64
NCBI CDD -
KEGG Orthology K01115; phospholipase D1/2
Gene Ontology GO:0003824; catalytic activity GO:0003824catalytic activity


Orthologs (automatic annotation)
TAIR AT3G16785 : phospholipase D P1
RAP-DB (Rice) LOC_Os05g29050.2 : phospholipase D p1, putative, expressed
MaizeGDB (Corn) Zm00025a036045 , Zm00025a043375
Brachypodium KQK06708 , KQK06709 , PNT70436
Barley HORVU1Hr1G059050.18 , HORVU1Hr1G059050.19 , HORVU1Hr1G059050.10 , HORVU1Hr1G059050.11 , HORVU1Hr1G059050.12 , HORVU1Hr1G059050.13 , HORVU1Hr1G059050.14 , HORVU1Hr1G059050.15 , HORVU1Hr1G059050.16 , HORVU1Hr1G059050.17 , HORVU1Hr1G059050.28 , HORVU1Hr1G059050.24 , HORVU1Hr1G059050.27 , HORVU1Hr1G059050.21 , HORVU1Hr1G059050.23 , HORVU1Hr1G059050.25 , HORVU1Hr1G059050.8 , HORVU1Hr1G059050.9 , HORVU1Hr1G059050.2 , HORVU1Hr1G059050.3 , HORVU1Hr1G059050.1 , HORVU1Hr1G059050.6 , HORVU1Hr1G059050.7 , HORVU1Hr1G059050.4 , HORVU1Hr1G059050.5 , HORVU1Hr1G059050.29 , HORVU1Hr1G059050.26 , HORVU1Hr1G059050.20
Wheat TraesCS1B02G242500 , TraesCS1B02G242500 , TraesCS1D02G230100 , TraesCS1D02G230100 , TraesCS1D02G230100 , TraesCS1D02G230100 , TraesCS1A02G228300 , TraesCS1A02G228300 , TraesCS1A02G228300
Populus PNT25948 , PNT25949 , PNT14045


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G065000 expressed protein -
2 Sobic.005G118600 NB-ARC domain containing protein, expressed -
3 Sobic.008G153000 MATH domain containing protein, expressed -
4 Sobic.006G035300 expressed protein -
5 Sobic.007G218000 chloride transporter, chloride channel family, putative, expressed -
6 Sobic.006G037700 phosphoribulokinase/Uridine kinase family protein, expressed -
7 Sobic.009G249700 expressed protein -
8 Sobic.003G259100 GPI transamidase component family protein, putative, expressed K05289: GPI-anchor transamidase subunit GAA1
9 Sobic.002G112700 glutamine-dependent NAD, putative, expressed K01950: E6.3.5.1, NADSYN1, QNS1, NAD+ synthase (glutamine-hydrolysing)
10 Sobic.009G119000 tetratricopeptide repeat containing protein, putative, expressed K09527: DnaJ homolog subfamily C member 7
11 Sobic.004G051200 WD domain containing protein, putative, expressed -
12 Sobic.006G224800 expressed protein -
13 Sobic.010G275500 EF hand family protein, putative, expressed -
14 Sobic.007G172200 inositol or phosphatidylinositol phosphatase/ phosphoric monoester hydrolase, putative, expressed K18081: myotubularin-related protein 1/2
15 Sobic.004G072100 centromere/kinetochore protein zw10, putative, expressed K11578: ZW10, protein transport protein DSL1/ZW10
16 Sobic.007G042400 HEAT repeat family protein, putative, expressed -
17 Sobic.K028600 expressed protein -
18 Sobic.003G059750 - K11797: PHIP, PH-interacting protein
19 Sobic.003G444800 expressed protein -
20 Sobic.003G212900 zinc ion binding protein, putative, expressed -


Gene co-expression network
sample Sobic003G147000 Sobic003G147000 Sobic001G065000 Sobic001G065000 Sobic003G147000--Sobic001G065000 Sobic005G118600 Sobic005G118600 Sobic003G147000--Sobic005G118600 Sobic008G153000 Sobic008G153000 Sobic003G147000--Sobic008G153000 Sobic006G035300 Sobic006G035300 Sobic003G147000--Sobic006G035300 Sobic007G218000 Sobic007G218000 Sobic003G147000--Sobic007G218000 Sobic006G037700 Sobic006G037700 Sobic003G147000--Sobic006G037700 Sobic009G249700 Sobic009G249700 Sobic003G147000--Sobic009G249700 Sobic003G259100 Sobic003G259100 Sobic003G147000--Sobic003G259100 Sobic002G112700 Sobic002G112700 Sobic003G147000--Sobic002G112700 Sobic001G114000 Sobic001G114000 Sobic001G065000--Sobic001G114000 Sobic001G281100 Sobic001G281100 Sobic001G065000--Sobic001G281100 Sobic006G012500 Sobic006G012500 Sobic001G065000--Sobic006G012500 Sobic001G534800 Sobic001G534800 Sobic001G065000--Sobic001G534800 Sobic001G065000--Sobic005G118600 Sobic008G099800 Sobic008G099800 Sobic001G065000--Sobic008G099800 Sobic003G093800 Sobic003G093800 Sobic001G065000--Sobic003G093800 Sobic001G065000--Sobic006G037700 Sobic003G229500 Sobic003G229500 Sobic001G065000--Sobic003G229500 Sobic003G059750 Sobic003G059750 Sobic005G118600--Sobic003G059750 Sobic008G084700 Sobic008G084700 Sobic005G118600--Sobic008G084700 Sobic003G225700 Sobic003G225700 Sobic005G118600--Sobic003G225700 Sobic005G118600--Sobic001G065000 Sobic009G166300 Sobic009G166300 Sobic005G118600--Sobic009G166300 Sobic005G118600--Sobic008G153000 Sobic005G118600--Sobic001G114000 Sobic002G071500 Sobic002G071500 Sobic005G118600--Sobic002G071500 Sobic007G103600 Sobic007G103600 Sobic005G118600--Sobic007G103600 Sobic006G116100 Sobic006G116100 Sobic008G153000--Sobic006G116100 Sobic006G046700 Sobic006G046700 Sobic008G153000--Sobic006G046700 Sobic008G149800 Sobic008G149800 Sobic008G153000--Sobic008G149800 Sobic002G264200 Sobic002G264200 Sobic008G153000--Sobic002G264200 Sobic001G155000 Sobic001G155000 Sobic008G153000--Sobic001G155000 Sobic003G445400 Sobic003G445400 Sobic008G153000--Sobic003G445400 Sobic008G153000--Sobic003G059750 Sobic007G026000 Sobic007G026000 Sobic008G153000--Sobic007G026000 Sobic010G069100 Sobic010G069100 Sobic008G153000--Sobic010G069100 Sobic006G035300--Sobic006G037700 Sobic006G035300--Sobic002G071500 Sobic006G035300--Sobic005G118600 Sobic006G035300--Sobic003G059750 Sobic006G035300--Sobic001G065000 Sobic006G035300--Sobic008G153000 Sobic006G035300--Sobic006G012500 Sobic001G109800 Sobic001G109800 Sobic006G035300--Sobic001G109800 Sobic006G035300--Sobic003G147000 Sobic007G132100 Sobic007G132100 Sobic007G218000--Sobic007G132100 Sobic004G072100 Sobic004G072100 Sobic007G218000--Sobic004G072100 Sobic007G218000--Sobic002G112700 Sobic006G131000 Sobic006G131000 Sobic007G218000--Sobic006G131000 Sobic009G044800 Sobic009G044800 Sobic007G218000--Sobic009G044800 Sobic010G204400 Sobic010G204400 Sobic007G218000--Sobic010G204400 Sobic007G218000--Sobic006G012500 Sobic007G218000--Sobic009G249700 Sobic009G092400 Sobic009G092400 Sobic007G218000--Sobic009G092400 Sobic004G051200 Sobic004G051200 Sobic006G037700--Sobic004G051200 Sobic006G037700--Sobic001G065000 Sobic006G037700--Sobic008G099800 Sobic003G072200 Sobic003G072200 Sobic006G037700--Sobic003G072200 Sobic007G098500 Sobic007G098500 Sobic006G037700--Sobic007G098500 Sobic006G037700--Sobic006G035300 Sobic001G050600 Sobic001G050600 Sobic006G037700--Sobic001G050600 Sobic006G037700--Sobic003G259100 Sobic001G058700 Sobic001G058700 Sobic006G037700--Sobic001G058700 Sobic009G249700--Sobic007G218000 Sobic009G249700--Sobic003G093800 Sobic003G189600 Sobic003G189600 Sobic009G249700--Sobic003G189600 Sobic003G394200 Sobic003G394200 Sobic009G249700--Sobic003G394200 Sobic005G034700 Sobic005G034700 Sobic009G249700--Sobic005G034700 Sobic004G345400 Sobic004G345400 Sobic009G249700--Sobic004G345400 Sobic010G169900 Sobic010G169900 Sobic009G249700--Sobic010G169900 Sobic003G444800 Sobic003G444800 Sobic009G249700--Sobic003G444800 Sobic007G042900 Sobic007G042900 Sobic009G249700--Sobic007G042900 Sobic004G113400 Sobic004G113400 Sobic003G259100--Sobic004G113400 Sobic003G259100--Sobic008G099800 Sobic003G259100--Sobic001G050600 Sobic003G259100--Sobic003G072200 Sobic001G273700 Sobic001G273700 Sobic003G259100--Sobic001G273700 Sobic003G259100--Sobic001G058700 Sobic001G347500 Sobic001G347500 Sobic003G259100--Sobic001G347500 Sobic001G219900 Sobic001G219900 Sobic003G259100--Sobic001G219900 Sobic010G034000 Sobic010G034000 Sobic003G259100--Sobic010G034000 Sobic002G112700--Sobic001G114000 Sobic002G112700--Sobic007G218000 Sobic007G008900 Sobic007G008900 Sobic002G112700--Sobic007G008900 Sobic002G112700--Sobic003G059750 Sobic002G405800 Sobic002G405800 Sobic002G112700--Sobic002G405800 Sobic002G112700--Sobic003G444800 Sobic002G112700--Sobic004G072100 Sobic007G011300 Sobic007G011300 Sobic002G112700--Sobic007G011300 Sobic002G112700--Sobic009G166300
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.