Gene annotation
Transcriptome id Sobic.007G172200.1
Synonym
Functional annotation inositol or phosphatidylinositol phosphatase/ phosphoric monoester hydrolase, putative, expressed
UniProt A0A1B6PIA0
Pfam PF06602
Panther DB PTHR10807 PTHR10807:SF8
NCBI CDD -
KEGG Orthology K18081; myotubularin-related protein 1/2
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G10550 : Myotubularin-like phosphatases II superfamily
RAP-DB (Rice) LOC_Os08g44260.1 : inositol or phosphatidylinositol phosphatase/ phosphoric monoester hydrolase, putative, expressed
MaizeGDB (Corn) Zm00025a016923 , Zm00025a005624
Brachypodium KQJ99335
Barley HORVU5Hr1G092990.3 , HORVU7Hr1G058500.9 , HORVU7Hr1G058500.8 , HORVU7Hr1G058500.4 , HORVU7Hr1G058500.7 , HORVU7Hr1G058500.6 , HORVU7Hr1G058500.1 , HORVU7Hr1G058500.3 , HORVU7Hr1G058500.11 , HORVU7Hr1G058500.10 , HORVU7Hr1G058500.13 , HORVU7Hr1G058500.12
Wheat TraesCS7B02G175000 , TraesCS7B02G175000 , TraesCS7B02G175000 , TraesCS7B02G175000 , TraesCS7A02G277300 , TraesCS7A02G277300 , TraesCS7D02G277300 , TraesCS7D02G277300 , TraesCS7D02G277300
Populus -


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cDNA sequences
Sobic.007G172200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G273700 tRNA-splicing endonuclease positive effector-related, putative, expressed K10706: SETX, senataxin
2 Sobic.001G370900 expressed protein K11665: INO80, DNA helicase INO80
3 Sobic.007G133700 expressed protein -
4 Sobic.003G118200 phosphoadenosine phosphosulfate, putative, expressed -
5 Sobic.009G256400 ATP binding protein, putative, expressed K15192: BTAF1, TATA-binding protein-associated factor
6 Sobic.003G422500 expressed protein -
7 Sobic.005G001000 RNA recognition motif containing protein, putative, expressed K10643: CNOT4, NOT4, CCR4-NOT transcription complex subunit 4
8 Sobic.009G165700 SAC3/GANP family protein, putative, expressed -
9 Sobic.008G132600 expressed protein -
10 Sobic.003G101400 transcriptional repressor, putative, expressed K11644: paired amphipathic helix protein Sin3a
11 Sobic.001G451400 HEAT repeat family protein, putative, expressed K15305: VAC14, vacuole morphology and inheritance protein 14
12 Sobic.002G042600 ubiquitin carboxyl-terminal hydrolase, putative, expressed K11838: USP7, ubiquitin carboxyl-terminal hydrolase 7
13 Sobic.007G218000 chloride transporter, chloride channel family, putative, expressed -
14 Sobic.002G146300 cig3, putative, expressed K14409: SMG7, protein SMG7
15 Sobic.008G098900 ubiquitin carboxyl-terminal hydrolase, putative, expressed K11838: USP7, ubiquitin carboxyl-terminal hydrolase 7
16 Sobic.001G263600 ubiquitin carboxyl-terminal hydrolase 5, putative, expressed K11835: USP4_11, ubiquitin carboxyl-terminal hydrolase 4/11
17 Sobic.006G126500 OsFBX146 - F-box domain containing protein, expressed -
18 Sobic.009G053900 HECT-domain domain containing protein, expressed K10589: ubiquitin-protein ligase E3 C
19 Sobic.010G247800 zinc finger, C3HC4 type domain containing protein, expressed K10696: E3 ubiquitin-protein ligase BRE1
20 Sobic.003G043200 EMB2410, putative, expressed -


Gene co-expression network
sample Sobic007G172200 Sobic007G172200 Sobic001G273700 Sobic001G273700 Sobic007G172200--Sobic001G273700 Sobic001G370900 Sobic001G370900 Sobic007G172200--Sobic001G370900 Sobic007G133700 Sobic007G133700 Sobic007G172200--Sobic007G133700 Sobic003G118200 Sobic003G118200 Sobic007G172200--Sobic003G118200 Sobic009G256400 Sobic009G256400 Sobic007G172200--Sobic009G256400 Sobic003G422500 Sobic003G422500 Sobic007G172200--Sobic003G422500 Sobic005G001000 Sobic005G001000 Sobic007G172200--Sobic005G001000 Sobic009G165700 Sobic009G165700 Sobic007G172200--Sobic009G165700 Sobic008G132600 Sobic008G132600 Sobic007G172200--Sobic008G132600 Sobic001G273700--Sobic007G172200 Sobic001G263600 Sobic001G263600 Sobic001G273700--Sobic001G263600 Sobic008G099800 Sobic008G099800 Sobic001G273700--Sobic008G099800 Sobic001G347500 Sobic001G347500 Sobic001G273700--Sobic001G347500 Sobic001G273700--Sobic007G133700 Sobic007G163100 Sobic007G163100 Sobic001G273700--Sobic007G163100 Sobic001G457900 Sobic001G457900 Sobic001G273700--Sobic001G457900 Sobic001G313700 Sobic001G313700 Sobic001G273700--Sobic001G313700 Sobic002G042600 Sobic002G042600 Sobic001G273700--Sobic002G042600 Sobic008G098900 Sobic008G098900 Sobic001G370900--Sobic008G098900 Sobic001G370900--Sobic005G001000 Sobic001G370900--Sobic009G256400 Sobic002G146300 Sobic002G146300 Sobic001G370900--Sobic002G146300 Sobic003G205200 Sobic003G205200 Sobic001G370900--Sobic003G205200 Sobic001G194200 Sobic001G194200 Sobic001G370900--Sobic001G194200 Sobic004G276400 Sobic004G276400 Sobic001G370900--Sobic004G276400 Sobic008G001200 Sobic008G001200 Sobic001G370900--Sobic008G001200 Sobic001G457800 Sobic001G457800 Sobic001G370900--Sobic001G457800 Sobic007G133700--Sobic003G422500 Sobic009G053900 Sobic009G053900 Sobic007G133700--Sobic009G053900 Sobic007G133700--Sobic002G146300 Sobic007G133700--Sobic008G098900 Sobic007G133700--Sobic007G172200 Sobic007G133700--Sobic001G370900 Sobic007G075400 Sobic007G075400 Sobic007G133700--Sobic007G075400 Sobic003G196300 Sobic003G196300 Sobic007G133700--Sobic003G196300 Sobic007G133700--Sobic001G273700 Sobic003G118200--Sobic009G053900 Sobic009G191000 Sobic009G191000 Sobic003G118200--Sobic009G191000 Sobic009G113000 Sobic009G113000 Sobic003G118200--Sobic009G113000 Sobic003G118200--Sobic003G422500 Sobic002G008900 Sobic002G008900 Sobic003G118200--Sobic002G008900 Sobic004G347400 Sobic004G347400 Sobic003G118200--Sobic004G347400 Sobic003G118200--Sobic007G075400 Sobic001G451400 Sobic001G451400 Sobic003G118200--Sobic001G451400 Sobic003G313500 Sobic003G313500 Sobic003G118200--Sobic003G313500 Sobic009G256400--Sobic001G457800 Sobic009G256400--Sobic008G001200 Sobic009G256400--Sobic001G370900 Sobic004G291900 Sobic004G291900 Sobic009G256400--Sobic004G291900 Sobic009G256400--Sobic005G001000 Sobic003G166750 Sobic003G166750 Sobic009G256400--Sobic003G166750 Sobic009G256400--Sobic001G194200 Sobic009G256400--Sobic004G276400 Sobic010G010700 Sobic010G010700 Sobic009G256400--Sobic010G010700 Sobic002G411600 Sobic002G411600 Sobic003G422500--Sobic002G411600 Sobic003G422500--Sobic009G191000 Sobic001G289600 Sobic001G289600 Sobic003G422500--Sobic001G289600 Sobic003G422500--Sobic009G165700 Sobic003G422500--Sobic002G008900 Sobic004G034900 Sobic004G034900 Sobic003G422500--Sobic004G034900 Sobic001G289800 Sobic001G289800 Sobic003G422500--Sobic001G289800 Sobic001G540400 Sobic001G540400 Sobic003G422500--Sobic001G540400 Sobic003G422500--Sobic008G132600 Sobic005G001000--Sobic001G194200 Sobic005G001000--Sobic002G008900 Sobic005G001000--Sobic001G370900 Sobic005G001000--Sobic003G205200 Sobic005G001000--Sobic004G291900 Sobic003G186000 Sobic003G186000 Sobic005G001000--Sobic003G186000 Sobic005G001000--Sobic008G001200 Sobic005G001000--Sobic003G422500 Sobic005G001000--Sobic009G256400 Sobic009G165700--Sobic003G422500 Sobic010G247800 Sobic010G247800 Sobic009G165700--Sobic010G247800 Sobic010G206900 Sobic010G206900 Sobic009G165700--Sobic010G206900 Sobic009G165700--Sobic003G166750 Sobic008G087866 Sobic008G087866 Sobic009G165700--Sobic008G087866 Sobic009G165700--Sobic001G451400 Sobic003G170900 Sobic003G170900 Sobic009G165700--Sobic003G170900 Sobic001G534700 Sobic001G534700 Sobic009G165700--Sobic001G534700 Sobic009G165700--Sobic008G001200 Sobic003G101400 Sobic003G101400 Sobic008G132600--Sobic003G101400 Sobic008G132600--Sobic003G422500 Sobic008G132600--Sobic002G411600 Sobic003G229500 Sobic003G229500 Sobic008G132600--Sobic003G229500 Sobic008G132600--Sobic009G191000 Sobic009G027300 Sobic009G027300 Sobic008G132600--Sobic009G027300 Sobic007G062800 Sobic007G062800 Sobic008G132600--Sobic007G062800 Sobic008G132600--Sobic002G008900 Sobic008G132600--Sobic010G247800
Octagon: transcription factors


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