Gene annotation
Transcriptome id Sobic.002G058300.3,Sobic.002G058300.2
Synonym EBS, Sb02g004890
Functional annotation ES43 protein, putative, expressed
UniProt C5XB76 , A0A1W0W2I5
Pfam PF00628 PF01426
Panther DB PTHR12505 PTHR12505:SF26
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005515; protein binding GO:0003682chromatin binding


Orthologs (automatic annotation)
TAIR AT4G22140 : PHD finger family protein / bromo-adjacent homology (BAH) domain-containing protein
RAP-DB (Rice) LOC_Os07g08880.1 : ES43 protein, putative, expressed
MaizeGDB (Corn) Zm00025a045253
Brachypodium KQK12668 , KQK20524
Barley HORVU5Hr1G106800.6 , HORVU5Hr1G106800.4 , HORVU5Hr1G106800.5 , HORVU5Hr1G106800.2 , HORVU5Hr1G106800.3 , HORVU5Hr1G106800.1 , HORVU2Hr1G054100.1 , HORVU2Hr1G054100.2 , HORVU2Hr1G054100.3 , HORVU2Hr1G054100.4 , HORVU2Hr1G054100.5 , HORVU2Hr1G054100.6 , HORVU2Hr1G054100.7
Wheat TraesCS2A02G227100 , TraesCS2A02G227100 , TraesCS5D02G453200 , TraesCS2B02G257000 , TraesCS2D02G242500
Populus -


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cDNA sequences
Sobic.002G058300


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G359300 ELM2 domain containing protein, putative, expressed -
2 Sobic.007G086500 expressed protein K16584: HAUS augmin-like complex subunit 1
3 Sobic.002G186000 CD2-binding protein-related, putative, expressed K13099: CD2BP2, CD2 antigen cytoplasmic tail-binding protein 2
4 Sobic.001G010600 U2 small nuclear ribonucleoprotein A, putative, expressed K11092: U2 small nuclear ribonucleoprotein A'
5 Sobic.003G197800 peptidyl-prolyl cis-trans isomerase, putative, expressed K12737: peptidyl-prolyl cis-trans isomerase SDCCAG10
6 Sobic.009G198100 expressed protein -
7 Sobic.010G033400 splicing factor, putative, expressed K12850: pre-mRNA-splicing factor 38B
8 Sobic.006G267300 expressed protein -
9 Sobic.007G205000 zinc finger family protein, putative, expressed -
10 Sobic.003G241200 nucampholin, putative, expressed K13100: pre-mRNA-splicing factor CWC22
11 Sobic.007G011400 armadillo/beta-catenin repeat family protein, putative, expressed -
12 Sobic.002G320500 MYB family transcription factor, putative, expressed -
13 Sobic.001G028400 domain of unknown function domain containing protein, expressed -
14 Sobic.001G090400 PHD-finger domain containing protein, putative, expressed K11346: inhibitor of growth protein 4
15 Sobic.004G078100 zinc finger C-x8-C-x5-C-x3-H type family protein, expressed -
16 Sobic.003G401100 WW domain containing protein, expressed K12865: PQBP1, polyglutamine-binding protein 1
17 Sobic.007G132400 RNA recognition motif containing protein, putative, expressed K12881: THOC4, THO complex subunit 4
18 Sobic.007G118200 RNA recognition motif containing protein, expressed K12897: transformer-2 protein
19 Sobic.003G437500 syntaxin 6, putative, expressed -
20 Sobic.003G433500 Putative splicing factor(PubMedID : 24356560)@serine/arginine repetitive matrix protein 1, putative, expressed K14325: RNA-binding protein with serine-rich domain 1


Gene co-expression network
sample Sobic002G058300 Sobic002G058300 Sobic003G359300 Sobic003G359300 Sobic002G058300--Sobic003G359300 Sobic007G086500 Sobic007G086500 Sobic002G058300--Sobic007G086500 Sobic002G186000 Sobic002G186000 Sobic002G058300--Sobic002G186000 Sobic001G010600 Sobic001G010600 Sobic002G058300--Sobic001G010600 Sobic003G197800 Sobic003G197800 Sobic002G058300--Sobic003G197800 Sobic009G198100 Sobic009G198100 Sobic002G058300--Sobic009G198100 Sobic010G033400 Sobic010G033400 Sobic002G058300--Sobic010G033400 Sobic006G267300 Sobic006G267300 Sobic002G058300--Sobic006G267300 Sobic007G205000 Sobic007G205000 Sobic002G058300--Sobic007G205000 Sobic003G359300--Sobic010G033400 Sobic004G263900 Sobic004G263900 Sobic003G359300--Sobic004G263900 Sobic003G248500 Sobic003G248500 Sobic003G359300--Sobic003G248500 Sobic007G063200 Sobic007G063200 Sobic003G359300--Sobic007G063200 Sobic001G028400 Sobic001G028400 Sobic003G359300--Sobic001G028400 Sobic008G174300 Sobic008G174300 Sobic003G359300--Sobic008G174300 Sobic001G056200 Sobic001G056200 Sobic003G359300--Sobic001G056200 Sobic002G365100 Sobic002G365100 Sobic003G359300--Sobic002G365100 Sobic003G359300--Sobic002G058300 Sobic007G086500--Sobic002G058300 Sobic007G086500--Sobic001G010600 Sobic001G375700 Sobic001G375700 Sobic007G086500--Sobic001G375700 Sobic007G132400 Sobic007G132400 Sobic007G086500--Sobic007G132400 Sobic001G131800 Sobic001G131800 Sobic007G086500--Sobic001G131800 Sobic010G028300 Sobic010G028300 Sobic007G086500--Sobic010G028300 Sobic009G140700 Sobic009G140700 Sobic007G086500--Sobic009G140700 Sobic001G143500 Sobic001G143500 Sobic007G086500--Sobic001G143500 Sobic001G281600 Sobic001G281600 Sobic007G086500--Sobic001G281600 Sobic002G186000--Sobic003G197800 Sobic002G157000 Sobic002G157000 Sobic002G186000--Sobic002G157000 Sobic002G248400 Sobic002G248400 Sobic002G186000--Sobic002G248400 Sobic001G094000 Sobic001G094000 Sobic002G186000--Sobic001G094000 Sobic003G200200 Sobic003G200200 Sobic002G186000--Sobic003G200200 Sobic007G011400 Sobic007G011400 Sobic002G186000--Sobic007G011400 Sobic002G186000--Sobic002G058300 Sobic001G162300 Sobic001G162300 Sobic002G186000--Sobic001G162300 Sobic003G220200 Sobic003G220200 Sobic002G186000--Sobic003G220200 Sobic001G010600--Sobic002G058300 Sobic001G010600--Sobic007G205000 Sobic001G010600--Sobic007G086500 Sobic001G226000 Sobic001G226000 Sobic001G010600--Sobic001G226000 Sobic003G115100 Sobic003G115100 Sobic001G010600--Sobic003G115100 Sobic001G010600--Sobic009G140700 Sobic004G013600 Sobic004G013600 Sobic001G010600--Sobic004G013600 Sobic001G010600--Sobic010G028300 Sobic008G139700 Sobic008G139700 Sobic001G010600--Sobic008G139700 Sobic003G197800--Sobic002G157000 Sobic002G320500 Sobic002G320500 Sobic003G197800--Sobic002G320500 Sobic003G197800--Sobic002G186000 Sobic002G151600 Sobic002G151600 Sobic003G197800--Sobic002G151600 Sobic006G133800 Sobic006G133800 Sobic003G197800--Sobic006G133800 Sobic009G065100 Sobic009G065100 Sobic003G197800--Sobic009G065100 Sobic003G173950 Sobic003G173950 Sobic003G197800--Sobic003G173950 Sobic003G197800--Sobic002G248400 Sobic001G206100 Sobic001G206100 Sobic003G197800--Sobic001G206100 Sobic007G118200 Sobic007G118200 Sobic009G198100--Sobic007G118200 Sobic002G034600 Sobic002G034600 Sobic009G198100--Sobic002G034600 Sobic009G198100--Sobic010G033400 Sobic003G355000 Sobic003G355000 Sobic009G198100--Sobic003G355000 Sobic003G081000 Sobic003G081000 Sobic009G198100--Sobic003G081000 Sobic009G198100--Sobic008G174300 Sobic009G198100--Sobic001G131800 Sobic009G198100--Sobic003G359300 Sobic009G198100--Sobic007G205000 Sobic010G033400--Sobic007G118200 Sobic010G033400--Sobic008G174300 Sobic010G033400--Sobic009G198100 Sobic004G350100 Sobic004G350100 Sobic010G033400--Sobic004G350100 Sobic010G033400--Sobic001G028400 Sobic010G260500 Sobic010G260500 Sobic010G033400--Sobic010G260500 Sobic010G033400--Sobic003G359300 Sobic010G033400--Sobic003G081000 Sobic010G033400--Sobic001G131800 Sobic007G111100 Sobic007G111100 Sobic006G267300--Sobic007G111100 Sobic009G257800 Sobic009G257800 Sobic006G267300--Sobic009G257800 Sobic003G205501 Sobic003G205501 Sobic006G267300--Sobic003G205501 Sobic001G408700 Sobic001G408700 Sobic006G267300--Sobic001G408700 Sobic009G195200 Sobic009G195200 Sobic006G267300--Sobic009G195200 Sobic006G267300--Sobic007G118200 Sobic010G202600 Sobic010G202600 Sobic006G267300--Sobic010G202600 Sobic003G433500 Sobic003G433500 Sobic006G267300--Sobic003G433500 Sobic008G127400 Sobic008G127400 Sobic006G267300--Sobic008G127400 Sobic007G205000--Sobic001G028400 Sobic006G278700 Sobic006G278700 Sobic007G205000--Sobic006G278700 Sobic007G205000--Sobic007G118200 Sobic007G205000--Sobic009G198100 Sobic007G205000--Sobic010G033400 Sobic007G205000--Sobic004G013600 Sobic007G205000--Sobic006G267300 Sobic007G205000--Sobic001G010600 Sobic007G205000--Sobic004G350100
Octagon: transcription factors


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