Gene annotation
Transcriptome id Sobic.002G186000.7,Sobic.002G186000.4,Sobic.002G186000.2,Sobic.002G186000.5,Sobic.002G186000.3,Sobic.002G186000.6
Synonym
Functional annotation CD2-binding protein-related, putative, expressed
UniProt A0A1W0W4Y0 , A0A1B6QC72
Pfam -
Panther DB PTHR13138 PTHR13138:SF3
NCBI CDD -
KEGG Orthology K13099; CD2BP2, CD2 antigen cytoplasmic tail-binding protein 2
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G09390 : CD2-binding protein-related
RAP-DB (Rice) LOC_Os09g20590.1 : CD2-binding protein-related, putative, expressed
MaizeGDB (Corn) Zm00025a046737
Brachypodium KQJ90050
Barley -
Wheat -
Populus -


JBrowse

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cDNA sequences
Sobic.002G186000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G197800 peptidyl-prolyl cis-trans isomerase, putative, expressed K12737: peptidyl-prolyl cis-trans isomerase SDCCAG10
2 Sobic.002G157000 enhancer of polycomb, putative, expressed K11322: enhancer of polycomb-like protein
3 Sobic.002G248400 ENT domain containing protein, expressed -
4 Sobic.001G094000 expressed protein -
5 Sobic.003G200200 SIT4 phosphatase-associated protein domain containing protein, expressed K15501: PPP6R3, serine/threonine-protein phosphatase 6 regulatory subunit 3
6 Sobic.007G011400 armadillo/beta-catenin repeat family protein, putative, expressed -
7 Sobic.002G058300 ES43 protein, putative, expressed -
8 Sobic.001G162300 KH domain containing protein, putative, expressed K13162: poly(rC)-binding protein 2
9 Sobic.003G220200 protein kinase family protein, putative, expressed K17541: SCY1-like protein 2
10 Sobic.001G251700 OsPP2Ac-4 - Phosphatase 2A isoform 4 belonging to family 2, expressed K04382: serine/threonine-protein phosphatase 2A catalytic subunit
11 Sobic.003G241200 nucampholin, putative, expressed K13100: pre-mRNA-splicing factor CWC22
12 Sobic.008G116500 plus-3 domain containing protein, expressed K15178: RNA polymerase-associated protein RTF1
13 Sobic.003G268300 surp module family protein, putative, expressed -
14 Sobic.003G173950 - -
15 Sobic.006G133800 myb-like DNA-binding domain containing protein, expressed -
16 Sobic.006G246900 expressed protein -
17 Sobic.004G030700 expressed protein -
18 Sobic.001G206100 expressed protein -
19 Sobic.005G110544 - -
20 Sobic.002G157300 Ser/Thr protein phosphatase family protein, putative, expressed K15423: serine/threonine-protein phosphatase 4 catalytic subunit


Gene co-expression network
sample Sobic002G186000 Sobic002G186000 Sobic003G197800 Sobic003G197800 Sobic002G186000--Sobic003G197800 Sobic002G157000 Sobic002G157000 Sobic002G186000--Sobic002G157000 Sobic002G248400 Sobic002G248400 Sobic002G186000--Sobic002G248400 Sobic001G094000 Sobic001G094000 Sobic002G186000--Sobic001G094000 Sobic003G200200 Sobic003G200200 Sobic002G186000--Sobic003G200200 Sobic007G011400 Sobic007G011400 Sobic002G186000--Sobic007G011400 Sobic002G058300 Sobic002G058300 Sobic002G186000--Sobic002G058300 Sobic001G162300 Sobic001G162300 Sobic002G186000--Sobic001G162300 Sobic003G220200 Sobic003G220200 Sobic002G186000--Sobic003G220200 Sobic003G197800--Sobic002G157000 Sobic002G320500 Sobic002G320500 Sobic003G197800--Sobic002G320500 Sobic003G197800--Sobic002G186000 Sobic002G151600 Sobic002G151600 Sobic003G197800--Sobic002G151600 Sobic006G133800 Sobic006G133800 Sobic003G197800--Sobic006G133800 Sobic009G065100 Sobic009G065100 Sobic003G197800--Sobic009G065100 Sobic003G173950 Sobic003G173950 Sobic003G197800--Sobic003G173950 Sobic003G197800--Sobic002G248400 Sobic001G206100 Sobic001G206100 Sobic003G197800--Sobic001G206100 Sobic002G157000--Sobic002G248400 Sobic002G157000--Sobic002G320500 Sobic002G157000--Sobic003G200200 Sobic001G420200 Sobic001G420200 Sobic002G157000--Sobic001G420200 Sobic008G173900 Sobic008G173900 Sobic002G157000--Sobic008G173900 Sobic003G268300 Sobic003G268300 Sobic002G157000--Sobic003G268300 Sobic002G157000--Sobic001G162300 Sobic003G108700 Sobic003G108700 Sobic002G157000--Sobic003G108700 Sobic002G157000--Sobic001G094000 Sobic002G248400--Sobic002G157000 Sobic002G248400--Sobic003G108700 Sobic002G248400--Sobic003G268300 Sobic002G248400--Sobic001G420200 Sobic002G248400--Sobic002G320500 Sobic002G248400--Sobic003G200200 Sobic006G032400 Sobic006G032400 Sobic002G248400--Sobic006G032400 Sobic001G090400 Sobic001G090400 Sobic002G248400--Sobic001G090400 Sobic004G257400 Sobic004G257400 Sobic002G248400--Sobic004G257400 Sobic001G094000--Sobic007G011400 Sobic009G040700 Sobic009G040700 Sobic001G094000--Sobic009G040700 Sobic001G477800 Sobic001G477800 Sobic001G094000--Sobic001G477800 Sobic001G094000--Sobic002G157000 Sobic001G094000--Sobic003G268300 Sobic002G157300 Sobic002G157300 Sobic001G094000--Sobic002G157300 Sobic003G187400 Sobic003G187400 Sobic001G094000--Sobic003G187400 Sobic004G031700 Sobic004G031700 Sobic001G094000--Sobic004G031700 Sobic006G080300 Sobic006G080300 Sobic001G094000--Sobic006G080300 Sobic003G200200--Sobic002G157000 Sobic002G006900 Sobic002G006900 Sobic003G200200--Sobic002G006900 Sobic003G200200--Sobic003G268300 Sobic001G251700 Sobic001G251700 Sobic003G200200--Sobic001G251700 Sobic007G096600 Sobic007G096600 Sobic003G200200--Sobic007G096600 Sobic003G200200--Sobic002G248400 Sobic001G155000 Sobic001G155000 Sobic003G200200--Sobic001G155000 Sobic003G200200--Sobic008G173900 Sobic003G170100 Sobic003G170100 Sobic003G200200--Sobic003G170100 Sobic007G011400--Sobic001G094000 Sobic007G205800 Sobic007G205800 Sobic007G011400--Sobic007G205800 Sobic007G011400--Sobic002G157300 Sobic010G263800 Sobic010G263800 Sobic007G011400--Sobic010G263800 Sobic002G313300 Sobic002G313300 Sobic007G011400--Sobic002G313300 Sobic007G011400--Sobic009G040700 Sobic007G011400--Sobic002G157000 Sobic007G011400--Sobic001G162300 Sobic008G034600 Sobic008G034600 Sobic007G011400--Sobic008G034600 Sobic003G359300 Sobic003G359300 Sobic002G058300--Sobic003G359300 Sobic007G086500 Sobic007G086500 Sobic002G058300--Sobic007G086500 Sobic002G058300--Sobic002G186000 Sobic001G010600 Sobic001G010600 Sobic002G058300--Sobic001G010600 Sobic002G058300--Sobic003G197800 Sobic009G198100 Sobic009G198100 Sobic002G058300--Sobic009G198100 Sobic010G033400 Sobic010G033400 Sobic002G058300--Sobic010G033400 Sobic006G267300 Sobic006G267300 Sobic002G058300--Sobic006G267300 Sobic007G205000 Sobic007G205000 Sobic002G058300--Sobic007G205000 Sobic001G162300--Sobic002G157000 Sobic006G246900 Sobic006G246900 Sobic001G162300--Sobic006G246900 Sobic001G162300--Sobic003G268300 Sobic007G178700 Sobic007G178700 Sobic001G162300--Sobic007G178700 Sobic006G082600 Sobic006G082600 Sobic001G162300--Sobic006G082600 Sobic001G162300--Sobic007G011400 Sobic001G162300--Sobic001G094000 Sobic001G162300--Sobic003G170100 Sobic001G162300--Sobic001G477800 Sobic007G145200 Sobic007G145200 Sobic003G220200--Sobic007G145200 Sobic003G220200--Sobic002G157300 Sobic003G220200--Sobic002G157000 Sobic003G220200--Sobic002G320500 Sobic007G137900 Sobic007G137900 Sobic003G220200--Sobic007G137900 Sobic003G220200--Sobic001G251700 Sobic003G220200--Sobic007G011400 Sobic004G349900 Sobic004G349900 Sobic003G220200--Sobic004G349900 Sobic001G107500 Sobic001G107500 Sobic003G220200--Sobic001G107500
Octagon: transcription factors


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