Gene annotation
Transcriptome id Sobic.003G173950.1
Synonym -
Functional annotation -
UniProt A0A1W0VXS8
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G356500 polypyrimidine tract-binding protein, putative, expressed K14948: PTBP2, polypyrimidine tract-binding protein 2
2 Sobic.003G241200 nucampholin, putative, expressed K13100: pre-mRNA-splicing factor CWC22
3 Sobic.003G197800 peptidyl-prolyl cis-trans isomerase, putative, expressed K12737: peptidyl-prolyl cis-trans isomerase SDCCAG10
4 Sobic.002G320500 MYB family transcription factor, putative, expressed -
5 Sobic.002G157000 enhancer of polycomb, putative, expressed K11322: enhancer of polycomb-like protein
6 Sobic.007G065400 expressed protein K14400: pre-mRNA cleavage complex 2 protein Pcf11
7 Sobic.004G084300 MYB family transcription factor, putative, expressed K11324: DMAP1, SWC4, DNA methyltransferase 1-associated protein 1
8 Sobic.009G102500 - -
9 Sobic.001G206100 expressed protein -
10 Sobic.003G200200 SIT4 phosphatase-associated protein domain containing protein, expressed K15501: PPP6R3, serine/threonine-protein phosphatase 6 regulatory subunit 3
11 Sobic.003G170100 - -
12 Sobic.002G248400 ENT domain containing protein, expressed -
13 Sobic.008G113100 protein binding protein, putative, expressed -
14 Sobic.001G306900 tetratricopeptide repeat domain containing protein, expressed K12600: SKI3, superkiller protein 3
15 Sobic.004G213000 AT hook motif family protein, expressed -
16 Sobic.007G054400 FAR1 family protein, expressed -
17 Sobic.003G108700 RNA recognition motif, putative, expressed -
18 Sobic.001G257300 OsFBL52 - F-box domain and LRR containing protein, expressed -
19 Sobic.002G186000 CD2-binding protein-related, putative, expressed K13099: CD2BP2, CD2 antigen cytoplasmic tail-binding protein 2
20 Sobic.006G013500 hydrolase/ zinc ion binding protein, putative, expressed K15442: TAD3, tRNA-specific adenosine deaminase 3


Gene co-expression network
sample Sobic003G173950 Sobic003G173950 Sobic001G356500 Sobic001G356500 Sobic003G173950--Sobic001G356500 Sobic003G241200 Sobic003G241200 Sobic003G173950--Sobic003G241200 Sobic003G197800 Sobic003G197800 Sobic003G173950--Sobic003G197800 Sobic002G320500 Sobic002G320500 Sobic003G173950--Sobic002G320500 Sobic002G157000 Sobic002G157000 Sobic003G173950--Sobic002G157000 Sobic007G065400 Sobic007G065400 Sobic003G173950--Sobic007G065400 Sobic004G084300 Sobic004G084300 Sobic003G173950--Sobic004G084300 Sobic009G102500 Sobic009G102500 Sobic003G173950--Sobic009G102500 Sobic001G206100 Sobic001G206100 Sobic003G173950--Sobic001G206100 Sobic001G356500--Sobic003G173950 Sobic001G356500--Sobic001G206100 Sobic001G356500--Sobic007G065400 Sobic002G264200 Sobic002G264200 Sobic001G356500--Sobic002G264200 Sobic001G356500--Sobic002G320500 Sobic003G170100 Sobic003G170100 Sobic001G356500--Sobic003G170100 Sobic002G121600 Sobic002G121600 Sobic001G356500--Sobic002G121600 Sobic001G257300 Sobic001G257300 Sobic001G356500--Sobic001G257300 Sobic002G161000 Sobic002G161000 Sobic001G356500--Sobic002G161000 Sobic003G241200--Sobic004G084300 Sobic006G165000 Sobic006G165000 Sobic003G241200--Sobic006G165000 Sobic006G032400 Sobic006G032400 Sobic003G241200--Sobic006G032400 Sobic002G248400 Sobic002G248400 Sobic003G241200--Sobic002G248400 Sobic003G241200--Sobic002G320500 Sobic003G241200--Sobic003G173950 Sobic010G236400 Sobic010G236400 Sobic003G241200--Sobic010G236400 Sobic003G200200 Sobic003G200200 Sobic003G241200--Sobic003G200200 Sobic003G241200--Sobic002G157000 Sobic003G197800--Sobic002G157000 Sobic003G197800--Sobic002G320500 Sobic002G186000 Sobic002G186000 Sobic003G197800--Sobic002G186000 Sobic002G151600 Sobic002G151600 Sobic003G197800--Sobic002G151600 Sobic006G133800 Sobic006G133800 Sobic003G197800--Sobic006G133800 Sobic009G065100 Sobic009G065100 Sobic003G197800--Sobic009G065100 Sobic003G197800--Sobic003G173950 Sobic003G197800--Sobic002G248400 Sobic003G197800--Sobic001G206100 Sobic002G320500--Sobic002G157000 Sobic002G320500--Sobic002G248400 Sobic002G320500--Sobic009G065100 Sobic009G210500 Sobic009G210500 Sobic002G320500--Sobic009G210500 Sobic002G320500--Sobic006G133800 Sobic001G107500 Sobic001G107500 Sobic002G320500--Sobic001G107500 Sobic002G320500--Sobic006G032400 Sobic009G000500 Sobic009G000500 Sobic002G320500--Sobic009G000500 Sobic001G090400 Sobic001G090400 Sobic002G320500--Sobic001G090400 Sobic002G157000--Sobic002G248400 Sobic002G157000--Sobic002G320500 Sobic002G157000--Sobic003G200200 Sobic001G420200 Sobic001G420200 Sobic002G157000--Sobic001G420200 Sobic008G173900 Sobic008G173900 Sobic002G157000--Sobic008G173900 Sobic003G268300 Sobic003G268300 Sobic002G157000--Sobic003G268300 Sobic001G162300 Sobic001G162300 Sobic002G157000--Sobic001G162300 Sobic003G108700 Sobic003G108700 Sobic002G157000--Sobic003G108700 Sobic001G094000 Sobic001G094000 Sobic002G157000--Sobic001G094000 Sobic002G006900 Sobic002G006900 Sobic007G065400--Sobic002G006900 Sobic002G191800 Sobic002G191800 Sobic007G065400--Sobic002G191800 Sobic008G009700 Sobic008G009700 Sobic007G065400--Sobic008G009700 Sobic009G040600 Sobic009G040600 Sobic007G065400--Sobic009G040600 Sobic004G145500 Sobic004G145500 Sobic007G065400--Sobic004G145500 Sobic007G065400--Sobic009G210500 Sobic003G119000 Sobic003G119000 Sobic007G065400--Sobic003G119000 Sobic003G372700 Sobic003G372700 Sobic007G065400--Sobic003G372700 Sobic008G028700 Sobic008G028700 Sobic007G065400--Sobic008G028700 Sobic008G047800 Sobic008G047800 Sobic004G084300--Sobic008G047800 Sobic001G222500 Sobic001G222500 Sobic004G084300--Sobic001G222500 Sobic004G084300--Sobic003G241200 Sobic004G084300--Sobic002G006900 Sobic004G084300--Sobic010G236400 Sobic004G084300--Sobic009G040600 Sobic008G067600 Sobic008G067600 Sobic004G084300--Sobic008G067600 Sobic004G084300--Sobic009G065100 Sobic007G132400 Sobic007G132400 Sobic004G084300--Sobic007G132400 Sobic009G102500--Sobic003G170100 Sobic009G102500--Sobic003G173950 Sobic002G144933 Sobic002G144933 Sobic009G102500--Sobic002G144933 Sobic007G096600 Sobic007G096600 Sobic009G102500--Sobic007G096600 Sobic009G102500--Sobic002G157000 Sobic009G102500--Sobic008G173900 Sobic001G152320 Sobic001G152320 Sobic009G102500--Sobic001G152320 Sobic009G102500--Sobic003G200200 Sobic009G102500--Sobic001G356500 Sobic001G206100--Sobic001G257300 Sobic006G013500 Sobic006G013500 Sobic001G206100--Sobic006G013500 Sobic001G206100--Sobic002G320500 Sobic006G080300 Sobic006G080300 Sobic001G206100--Sobic006G080300 Sobic001G206100--Sobic002G157000 Sobic001G206100--Sobic009G000500 Sobic004G213000 Sobic004G213000 Sobic001G206100--Sobic004G213000 Sobic001G206100--Sobic001G356500 Sobic001G206100--Sobic002G161000
Octagon: transcription factors


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