Gene annotation
Transcriptome id Sobic.004G030700.2
Synonym Sb04g002670
Functional annotation expressed protein
UniProt A0A1Z5RKV9
Pfam -
Panther DB PTHR33924 PTHR33924:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G40630 : Uncharacterised conserved protein (UCP030365)
RAP-DB (Rice) LOC_Os02g03940.1 : expressed protein
MaizeGDB (Corn) Zm00025a035000 , Zm00025a018864 , Zm00025a003007 , Zm00025a054245
Brachypodium KQJ93139
Barley HORVU6Hr1G017100.10 , HORVU6Hr1G017100.9 , HORVU6Hr1G017100.8 , HORVU6Hr1G017100.5 , HORVU6Hr1G017100.4 , HORVU6Hr1G017100.7 , HORVU6Hr1G017100.6 , HORVU6Hr1G017100.1 , HORVU6Hr1G017100.3 , HORVU6Hr1G017100.2
Wheat TraesCS6D02G088000 , TraesCS6D02G088000 , TraesCS6B02G123400 , TraesCS6A02G095400
Populus -


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cDNA sequences
Sobic.004G030700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G011400 armadillo/beta-catenin repeat family protein, putative, expressed -
2 Sobic.002G186000 CD2-binding protein-related, putative, expressed K13099: CD2BP2, CD2 antigen cytoplasmic tail-binding protein 2
3 Sobic.002G049000 frigida, putative, expressed -
4 Sobic.008G116500 plus-3 domain containing protein, expressed K15178: RNA polymerase-associated protein RTF1
5 Sobic.001G094000 expressed protein -
6 Sobic.002G058300 ES43 protein, putative, expressed -
7 Sobic.010G074500 -(PubMedID : 26320239)@phosphopantothenoylcysteine decarboxylase, putative, expressed K01598: PPCDC, phosphopantothenoylcysteine decarboxylase
8 Sobic.001G251700 OsPP2Ac-4 - Phosphatase 2A isoform 4 belonging to family 2, expressed K04382: serine/threonine-protein phosphatase 2A catalytic subunit
9 Sobic.003G346000 IQ calmodulin-binding motif domain containing protein, expressed -
10 Sobic.004G241400 DCN1-like protein 2, putative, expressed K17822: DCN1-like protein 1/2
11 Sobic.005G162600 zinc knuckle domain containing protein, expressed -
12 Sobic.004G061900 Sad1 / UNC-like C-terminal domain containing protein, putative, expressed K19347: SUN domain-containing protein 1/2
13 Sobic.006G129700 amine oxidase, flavin-containing, domain containing protein, expressed K00231: PPOX, protoporphyrinogen/coproporphyrinogen III oxidase
14 Sobic.007G116400 - -
15 Sobic.001G049600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@squalene synthetase, putative, expressed K00801: farnesyl-diphosphate farnesyltransferase
16 Sobic.008G068800 cytokinin inducible protein, putative, expressed -
17 Sobic.003G248100 CGMC_MAPKCMGC_2.6 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed K04371: ERK, mitogen-activated protein kinase 1/3
18 Sobic.007G195400 FHA domain containing protein, putative, expressed -
19 Sobic.002G157000 enhancer of polycomb, putative, expressed K11322: enhancer of polycomb-like protein
20 Sobic.003G359300 ELM2 domain containing protein, putative, expressed -


Gene co-expression network
sample Sobic004G030700 Sobic004G030700 Sobic007G011400 Sobic007G011400 Sobic004G030700--Sobic007G011400 Sobic002G186000 Sobic002G186000 Sobic004G030700--Sobic002G186000 Sobic002G049000 Sobic002G049000 Sobic004G030700--Sobic002G049000 Sobic008G116500 Sobic008G116500 Sobic004G030700--Sobic008G116500 Sobic001G094000 Sobic001G094000 Sobic004G030700--Sobic001G094000 Sobic002G058300 Sobic002G058300 Sobic004G030700--Sobic002G058300 Sobic010G074500 Sobic010G074500 Sobic004G030700--Sobic010G074500 Sobic001G251700 Sobic001G251700 Sobic004G030700--Sobic001G251700 Sobic003G346000 Sobic003G346000 Sobic004G030700--Sobic003G346000 Sobic007G011400--Sobic001G094000 Sobic007G205800 Sobic007G205800 Sobic007G011400--Sobic007G205800 Sobic002G157300 Sobic002G157300 Sobic007G011400--Sobic002G157300 Sobic010G263800 Sobic010G263800 Sobic007G011400--Sobic010G263800 Sobic002G313300 Sobic002G313300 Sobic007G011400--Sobic002G313300 Sobic009G040700 Sobic009G040700 Sobic007G011400--Sobic009G040700 Sobic002G157000 Sobic002G157000 Sobic007G011400--Sobic002G157000 Sobic001G162300 Sobic001G162300 Sobic007G011400--Sobic001G162300 Sobic008G034600 Sobic008G034600 Sobic007G011400--Sobic008G034600 Sobic003G197800 Sobic003G197800 Sobic002G186000--Sobic003G197800 Sobic002G186000--Sobic002G157000 Sobic002G248400 Sobic002G248400 Sobic002G186000--Sobic002G248400 Sobic002G186000--Sobic001G094000 Sobic003G200200 Sobic003G200200 Sobic002G186000--Sobic003G200200 Sobic002G186000--Sobic007G011400 Sobic002G186000--Sobic002G058300 Sobic002G186000--Sobic001G162300 Sobic003G220200 Sobic003G220200 Sobic002G186000--Sobic003G220200 Sobic002G049000--Sobic003G346000 Sobic002G297800 Sobic002G297800 Sobic002G049000--Sobic002G297800 Sobic002G090400 Sobic002G090400 Sobic002G049000--Sobic002G090400 Sobic008G068800 Sobic008G068800 Sobic002G049000--Sobic008G068800 Sobic002G049000--Sobic007G011400 Sobic002G061400 Sobic002G061400 Sobic002G049000--Sobic002G061400 Sobic002G049000--Sobic001G094000 Sobic002G049000--Sobic008G034600 Sobic001G394400 Sobic001G394400 Sobic002G049000--Sobic001G394400 Sobic002G001600 Sobic002G001600 Sobic008G116500--Sobic002G001600 Sobic001G543900 Sobic001G543900 Sobic008G116500--Sobic001G543900 Sobic008G116500--Sobic007G011400 Sobic001G439500 Sobic001G439500 Sobic008G116500--Sobic001G439500 Sobic006G080300 Sobic006G080300 Sobic008G116500--Sobic006G080300 Sobic007G037100 Sobic007G037100 Sobic008G116500--Sobic007G037100 Sobic008G116500--Sobic002G313300 Sobic001G477800 Sobic001G477800 Sobic008G116500--Sobic001G477800 Sobic004G196700 Sobic004G196700 Sobic008G116500--Sobic004G196700 Sobic001G094000--Sobic007G011400 Sobic001G094000--Sobic009G040700 Sobic001G094000--Sobic001G477800 Sobic001G094000--Sobic002G157000 Sobic003G268300 Sobic003G268300 Sobic001G094000--Sobic003G268300 Sobic001G094000--Sobic002G157300 Sobic003G187400 Sobic003G187400 Sobic001G094000--Sobic003G187400 Sobic004G031700 Sobic004G031700 Sobic001G094000--Sobic004G031700 Sobic001G094000--Sobic006G080300 Sobic003G359300 Sobic003G359300 Sobic002G058300--Sobic003G359300 Sobic007G086500 Sobic007G086500 Sobic002G058300--Sobic007G086500 Sobic002G058300--Sobic002G186000 Sobic001G010600 Sobic001G010600 Sobic002G058300--Sobic001G010600 Sobic002G058300--Sobic003G197800 Sobic009G198100 Sobic009G198100 Sobic002G058300--Sobic009G198100 Sobic010G033400 Sobic010G033400 Sobic002G058300--Sobic010G033400 Sobic006G267300 Sobic006G267300 Sobic002G058300--Sobic006G267300 Sobic007G205000 Sobic007G205000 Sobic002G058300--Sobic007G205000 Sobic010G074500--Sobic010G263800 Sobic006G009400 Sobic006G009400 Sobic010G074500--Sobic006G009400 Sobic007G094801 Sobic007G094801 Sobic010G074500--Sobic007G094801 Sobic010G074500--Sobic007G011400 Sobic002G283300 Sobic002G283300 Sobic010G074500--Sobic002G283300 Sobic005G141801 Sobic005G141801 Sobic010G074500--Sobic005G141801 Sobic009G156000 Sobic009G156000 Sobic010G074500--Sobic009G156000 Sobic004G143700 Sobic004G143700 Sobic010G074500--Sobic004G143700 Sobic010G074500--Sobic007G205800 Sobic007G137900 Sobic007G137900 Sobic001G251700--Sobic007G137900 Sobic001G251700--Sobic003G200200 Sobic001G251700--Sobic002G157300 Sobic001G251700--Sobic002G157000 Sobic006G082600 Sobic006G082600 Sobic001G251700--Sobic006G082600 Sobic001G251700--Sobic002G248400 Sobic002G320500 Sobic002G320500 Sobic001G251700--Sobic002G320500 Sobic001G251700--Sobic003G268300 Sobic001G251700--Sobic003G220200 Sobic003G346000--Sobic002G049000 Sobic003G346000--Sobic007G011400 Sobic003G346000--Sobic008G034600 Sobic003G346000--Sobic002G313300 Sobic002G151600 Sobic002G151600 Sobic003G346000--Sobic002G151600 Sobic004G088400 Sobic004G088400 Sobic003G346000--Sobic004G088400 Sobic007G008800 Sobic007G008800 Sobic003G346000--Sobic007G008800 Sobic002G177400 Sobic002G177400 Sobic003G346000--Sobic002G177400 Sobic004G005400 Sobic004G005400 Sobic003G346000--Sobic004G005400
Octagon: transcription factors


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