Gene annotation
Transcriptome id Sobic.010G074500.1
Synonym ATHAL3, ATHAL3A, HAL3A, HAL3, Sb10g006520
Functional annotation - (PubMedID : 26320239)
phosphopantothenoylcysteine decarboxylase, putative, expressed
UniProt C5Z607
Pfam PF02441
Panther DB PTHR14359
NCBI CDD KOG0672; Halotolerance protein HAL3 (contains flavoprotein domain)
KEGG Orthology K01598; PPCDC, phosphopantothenoylcysteine decarboxylase
Gene Ontology GO:0003824; catalytic activity


Orthologs (automatic annotation)
TAIR AT3G18030 : HAL3-like protein A
RAP-DB (Rice) LOC_Os06g09910.1 : phosphopantothenoylcysteine decarboxylase, putative, expressed
MaizeGDB (Corn) Zm00025a000808
Brachypodium -
Barley HORVU7Hr1G034130.2 , HORVU7Hr1G034130.3 , HORVU7Hr1G034130.4 , HORVU7Hr1G034130.5
Wheat TraesCS7A02G162200 , TraesCS7D02G163900
Populus -


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cDNA sequences
Sobic.010G074500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G263800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@uncharacterized protein(PubMedID : 28640841)@UPF0183 protein, putative, expressed -
2 Sobic.006G009400 G-patch domain containing protein, expressed -
3 Sobic.007G094801 - -
4 Sobic.007G011400 armadillo/beta-catenin repeat family protein, putative, expressed -
5 Sobic.002G283300 protein kinase family protein, putative, expressed -
6 Sobic.005G141801 - -
7 Sobic.009G156000 arginyl-tRNA--protein transferase 1, putative, expressed K00685: arginyl-tRNA---protein transferase
8 Sobic.004G143700 protein phosphatase 2C, putative, expressed -
9 Sobic.007G205800 chaperone protein dnaJ 10, putative, expressed -
10 Sobic.008G034600 protein kinase PKN/PRK1, effector, putative, expressed -
11 Sobic.003G244800 - -
12 Sobic.002G157300 Ser/Thr protein phosphatase family protein, putative, expressed K15423: serine/threonine-protein phosphatase 4 catalytic subunit
13 Sobic.005G110427 - -
14 Sobic.007G073400 SHR5-receptor-like kinase, putative, expressed -
15 Sobic.001G253100 3-5 exonuclease family protein, putative, expressed -
16 Sobic.004G271900 RMD5 homolog A, putative, expressed -
17 Sobic.010G026400 BUD13, putative, expressed K13106: BUD13, pre-mRNA-splicing factor CWC26
18 Sobic.007G191100 zinc finger DHHC domain-containing protein, putative, expressed K16675: palmitoyltransferase ZDHHC9/14/18
19 Sobic.005G055150 - -
20 Sobic.001G267233 - -


Gene co-expression network
sample Sobic010G074500 Sobic010G074500 Sobic010G263800 Sobic010G263800 Sobic010G074500--Sobic010G263800 Sobic006G009400 Sobic006G009400 Sobic010G074500--Sobic006G009400 Sobic007G094801 Sobic007G094801 Sobic010G074500--Sobic007G094801 Sobic007G011400 Sobic007G011400 Sobic010G074500--Sobic007G011400 Sobic002G283300 Sobic002G283300 Sobic010G074500--Sobic002G283300 Sobic005G141801 Sobic005G141801 Sobic010G074500--Sobic005G141801 Sobic009G156000 Sobic009G156000 Sobic010G074500--Sobic009G156000 Sobic004G143700 Sobic004G143700 Sobic010G074500--Sobic004G143700 Sobic007G205800 Sobic007G205800 Sobic010G074500--Sobic007G205800 Sobic010G263800--Sobic006G009400 Sobic010G263800--Sobic007G011400 Sobic002G077200 Sobic002G077200 Sobic010G263800--Sobic002G077200 Sobic002G313300 Sobic002G313300 Sobic010G263800--Sobic002G313300 Sobic002G157300 Sobic002G157300 Sobic010G263800--Sobic002G157300 Sobic010G263800--Sobic007G205800 Sobic009G117400 Sobic009G117400 Sobic010G263800--Sobic009G117400 Sobic001G347600 Sobic001G347600 Sobic010G263800--Sobic001G347600 Sobic008G034600 Sobic008G034600 Sobic010G263800--Sobic008G034600 Sobic006G009400--Sobic010G263800 Sobic005G055150 Sobic005G055150 Sobic006G009400--Sobic005G055150 Sobic006G009400--Sobic002G313300 Sobic001G543900 Sobic001G543900 Sobic006G009400--Sobic001G543900 Sobic005G110427 Sobic005G110427 Sobic006G009400--Sobic005G110427 Sobic001G477800 Sobic001G477800 Sobic006G009400--Sobic001G477800 Sobic007G073400 Sobic007G073400 Sobic006G009400--Sobic007G073400 Sobic007G178700 Sobic007G178700 Sobic006G009400--Sobic007G178700 Sobic006G262200 Sobic006G262200 Sobic006G009400--Sobic006G262200 Sobic007G094801--Sobic010G074500 Sobic007G094801--Sobic010G263800 Sobic007G094801--Sobic007G011400 Sobic007G094801--Sobic008G034600 Sobic006G129700 Sobic006G129700 Sobic007G094801--Sobic006G129700 Sobic003G315332 Sobic003G315332 Sobic007G094801--Sobic003G315332 Sobic007G094801--Sobic007G205800 Sobic007G191100 Sobic007G191100 Sobic007G094801--Sobic007G191100 Sobic007G094801--Sobic004G143700 Sobic001G094000 Sobic001G094000 Sobic007G011400--Sobic001G094000 Sobic007G011400--Sobic007G205800 Sobic007G011400--Sobic002G157300 Sobic007G011400--Sobic010G263800 Sobic007G011400--Sobic002G313300 Sobic009G040700 Sobic009G040700 Sobic007G011400--Sobic009G040700 Sobic002G157000 Sobic002G157000 Sobic007G011400--Sobic002G157000 Sobic001G162300 Sobic001G162300 Sobic007G011400--Sobic001G162300 Sobic007G011400--Sobic008G034600 Sobic002G283300--Sobic009G156000 Sobic002G283300--Sobic010G263800 Sobic004G212800 Sobic004G212800 Sobic002G283300--Sobic004G212800 Sobic002G283300--Sobic004G143700 Sobic002G283300--Sobic006G009400 SobicK016900 SobicK016900 Sobic002G283300--SobicK016900 Sobic001G287301 Sobic001G287301 Sobic002G283300--Sobic001G287301 Sobic010G248200 Sobic010G248200 Sobic002G283300--Sobic010G248200 Sobic005G130200 Sobic005G130200 Sobic002G283300--Sobic005G130200 Sobic005G141801--Sobic005G055150 Sobic005G141801--Sobic006G009400 Sobic005G141801--Sobic010G074500 Sobic001G111900 Sobic001G111900 Sobic005G141801--Sobic001G111900 Sobic005G141801--Sobic010G263800 Sobic005G141801--Sobic006G262200 Sobic005G141801--Sobic005G110427 Sobic002G051450 Sobic002G051450 Sobic005G141801--Sobic002G051450 Sobic005G141801--Sobic009G117400 Sobic009G156000--Sobic002G283300 Sobic005G028400 Sobic005G028400 Sobic009G156000--Sobic005G028400 Sobic003G093600 Sobic003G093600 Sobic009G156000--Sobic003G093600 Sobic008G161401 Sobic008G161401 Sobic009G156000--Sobic008G161401 Sobic009G156000--Sobic005G130200 Sobic002G165300 Sobic002G165300 Sobic009G156000--Sobic002G165300 Sobic001G479500 Sobic001G479500 Sobic009G156000--Sobic001G479500 Sobic009G156000--Sobic010G248200 Sobic009G156000--Sobic004G143700 Sobic004G143700--Sobic007G073400 Sobic007G023700 Sobic007G023700 Sobic004G143700--Sobic007G023700 Sobic004G143700--Sobic004G212800 Sobic004G143700--Sobic002G283300 Sobic004G143700--Sobic010G248200 Sobic001G024200 Sobic001G024200 Sobic004G143700--Sobic001G024200 Sobic004G143700--Sobic003G093600 Sobic001G439500 Sobic001G439500 Sobic004G143700--Sobic001G439500 Sobic004G143700--Sobic001G543900 Sobic007G205800--Sobic007G011400 Sobic009G087800 Sobic009G087800 Sobic007G205800--Sobic009G087800 Sobic007G205800--Sobic010G263800 Sobic007G205800--Sobic008G034600 Sobic004G271900 Sobic004G271900 Sobic007G205800--Sobic004G271900 Sobic009G022200 Sobic009G022200 Sobic007G205800--Sobic009G022200 Sobic007G205800--Sobic003G093600 Sobic003G258400 Sobic003G258400 Sobic007G205800--Sobic003G258400 Sobic007G205800--Sobic002G077200
Octagon: transcription factors


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