Gene annotation
Transcriptome id Sobic.007G195400.1,Sobic.007G195400.2
Synonym
Functional annotation FHA domain containing protein, putative, expressed
UniProt A0A1Z5RAN5 , A0A1B6PIN4
Pfam PF00498
Panther DB PTHR21712 PTHR21712:SF35
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT3G07220 : SMAD/FHA domain-containing protein
RAP-DB (Rice) LOC_Os08g41710.1 : FHA domain containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a005244
Brachypodium PNT68482 , PNT68483 , PNT68484 , PNT68485
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.007G195400


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G359300 ELM2 domain containing protein, putative, expressed -
2 Sobic.004G061900 Sad1 / UNC-like C-terminal domain containing protein, putative, expressed K19347: SUN domain-containing protein 1/2
3 Sobic.008G034600 protein kinase PKN/PRK1, effector, putative, expressed -
4 Sobic.007G191100 zinc finger DHHC domain-containing protein, putative, expressed K16675: palmitoyltransferase ZDHHC9/14/18
5 Sobic.006G129700 amine oxidase, flavin-containing, domain containing protein, expressed K00231: PPOX, protoporphyrinogen/coproporphyrinogen III oxidase
6 Sobic.003G093600 methyltransferase, putative, expressed -
7 Sobic.001G216600 zinc finger, C3HC4 type domain containing protein, expressed -
8 Sobic.002G058300 ES43 protein, putative, expressed -
9 Sobic.003G115100 importin subunit alpha, putative, expressed -
10 Sobic.001G179000 DNA-directed RNA polymerase subunit, putative, expressed K03014: RPB6, DNA-directed RNA polymerases I, II, and III subunit RPABC2
11 Sobic.002G049000 frigida, putative, expressed -
12 Sobic.009G022200 Putative splicing factor(PubMedID : 24356560)@splicing factor, arginine/serine-rich 7, putative, expressed K12896: splicing factor, arginine/serine-rich 7
13 Sobic.003G346000 IQ calmodulin-binding motif domain containing protein, expressed -
14 Sobic.007G224900 RNA recognition motif containing protein, expressed K12891: splicing factor, arginine/serine-rich 2
15 Sobic.002G061400 OsFBX237 - F-box domain containing protein, expressed -
16 Sobic.003G437500 syntaxin 6, putative, expressed -
17 Sobic.009G030300 RNA polymerase II-associated protein 3, putative, expressed -
18 Sobic.007G063200 tentative name(PubMedID : 31536532)@core histone H2A/H2B/H3/H4, putative, expressed K08066: NFYC, nuclear transcription factor Y, gamma
19 Sobic.004G030700 expressed protein -
20 Sobic.003G248500 WD domain, G-beta repeat domain containing protein, expressed -


Gene co-expression network
sample Sobic007G195400 Sobic007G195400 Sobic003G359300 Sobic003G359300 Sobic007G195400--Sobic003G359300 Sobic004G061900 Sobic004G061900 Sobic007G195400--Sobic004G061900 Sobic008G034600 Sobic008G034600 Sobic007G195400--Sobic008G034600 Sobic007G191100 Sobic007G191100 Sobic007G195400--Sobic007G191100 Sobic006G129700 Sobic006G129700 Sobic007G195400--Sobic006G129700 Sobic003G093600 Sobic003G093600 Sobic007G195400--Sobic003G093600 Sobic001G216600 Sobic001G216600 Sobic007G195400--Sobic001G216600 Sobic002G058300 Sobic002G058300 Sobic007G195400--Sobic002G058300 Sobic003G115100 Sobic003G115100 Sobic007G195400--Sobic003G115100 Sobic010G033400 Sobic010G033400 Sobic003G359300--Sobic010G033400 Sobic004G263900 Sobic004G263900 Sobic003G359300--Sobic004G263900 Sobic003G248500 Sobic003G248500 Sobic003G359300--Sobic003G248500 Sobic007G063200 Sobic007G063200 Sobic003G359300--Sobic007G063200 Sobic001G028400 Sobic001G028400 Sobic003G359300--Sobic001G028400 Sobic008G174300 Sobic008G174300 Sobic003G359300--Sobic008G174300 Sobic001G056200 Sobic001G056200 Sobic003G359300--Sobic001G056200 Sobic002G365100 Sobic002G365100 Sobic003G359300--Sobic002G365100 Sobic003G359300--Sobic002G058300 Sobic004G061900--Sobic007G191100 Sobic008G129700 Sobic008G129700 Sobic004G061900--Sobic008G129700 Sobic004G061900--Sobic006G129700 Sobic008G117200 Sobic008G117200 Sobic004G061900--Sobic008G117200 Sobic009G030300 Sobic009G030300 Sobic004G061900--Sobic009G030300 Sobic004G345700 Sobic004G345700 Sobic004G061900--Sobic004G345700 Sobic002G177400 Sobic002G177400 Sobic004G061900--Sobic002G177400 Sobic001G094000 Sobic001G094000 Sobic004G061900--Sobic001G094000 Sobic004G027100 Sobic004G027100 Sobic004G061900--Sobic004G027100 Sobic007G205800 Sobic007G205800 Sobic008G034600--Sobic007G205800 Sobic007G011400 Sobic007G011400 Sobic008G034600--Sobic007G011400 Sobic010G263800 Sobic010G263800 Sobic008G034600--Sobic010G263800 Sobic004G271900 Sobic004G271900 Sobic008G034600--Sobic004G271900 Sobic008G034600--Sobic008G117200 Sobic002G421700 Sobic002G421700 Sobic008G034600--Sobic002G421700 Sobic009G022200 Sobic009G022200 Sobic008G034600--Sobic009G022200 Sobic007G224900 Sobic007G224900 Sobic008G034600--Sobic007G224900 Sobic003G346000 Sobic003G346000 Sobic008G034600--Sobic003G346000 Sobic007G191100--Sobic004G061900 Sobic002G076400 Sobic002G076400 Sobic007G191100--Sobic002G076400 Sobic007G191100--Sobic008G034600 Sobic010G077600 Sobic010G077600 Sobic007G191100--Sobic010G077600 Sobic007G191100--Sobic010G263800 Sobic007G191100--Sobic007G011400 Sobic010G074500 Sobic010G074500 Sobic007G191100--Sobic010G074500 Sobic007G191100--Sobic003G093600 Sobic007G191100--Sobic008G117200 Sobic006G129700--Sobic004G061900 Sobic003G315332 Sobic003G315332 Sobic006G129700--Sobic003G315332 Sobic007G094801 Sobic007G094801 Sobic006G129700--Sobic007G094801 Sobic006G129700--Sobic008G117200 Sobic005G162600 Sobic005G162600 Sobic006G129700--Sobic005G162600 Sobic006G129700--Sobic002G177400 Sobic006G129700--Sobic007G011400 Sobic006G129700--Sobic008G034600 Sobic006G129700--Sobic009G030300 Sobic007G023700 Sobic007G023700 Sobic003G093600--Sobic007G023700 Sobic003G093600--Sobic009G022200 Sobic003G093600--Sobic004G271900 Sobic003G093600--Sobic007G205800 Sobic004G143700 Sobic004G143700 Sobic003G093600--Sobic004G143700 Sobic009G156000 Sobic009G156000 Sobic003G093600--Sobic009G156000 Sobic009G087800 Sobic009G087800 Sobic003G093600--Sobic009G087800 Sobic003G258400 Sobic003G258400 Sobic003G093600--Sobic003G258400 Sobic001G424700 Sobic001G424700 Sobic003G093600--Sobic001G424700 Sobic001G216600--Sobic007G195400 Sobic001G309100 Sobic001G309100 Sobic001G216600--Sobic001G309100 Sobic009G164900 Sobic009G164900 Sobic001G216600--Sobic009G164900 Sobic003G437500 Sobic003G437500 Sobic001G216600--Sobic003G437500 Sobic004G119000 Sobic004G119000 Sobic001G216600--Sobic004G119000 Sobic004G150400 Sobic004G150400 Sobic001G216600--Sobic004G150400 Sobic002G334600 Sobic002G334600 Sobic001G216600--Sobic002G334600 Sobic002G272800 Sobic002G272800 Sobic001G216600--Sobic002G272800 Sobic004G349100 Sobic004G349100 Sobic001G216600--Sobic004G349100 Sobic002G058300--Sobic003G359300 Sobic007G086500 Sobic007G086500 Sobic002G058300--Sobic007G086500 Sobic002G186000 Sobic002G186000 Sobic002G058300--Sobic002G186000 Sobic001G010600 Sobic001G010600 Sobic002G058300--Sobic001G010600 Sobic003G197800 Sobic003G197800 Sobic002G058300--Sobic003G197800 Sobic009G198100 Sobic009G198100 Sobic002G058300--Sobic009G198100 Sobic002G058300--Sobic010G033400 Sobic006G267300 Sobic006G267300 Sobic002G058300--Sobic006G267300 Sobic007G205000 Sobic007G205000 Sobic002G058300--Sobic007G205000 Sobic001G226000 Sobic001G226000 Sobic003G115100--Sobic001G226000 Sobic009G151200 Sobic009G151200 Sobic003G115100--Sobic009G151200 Sobic003G115100--Sobic001G010600 Sobic003G115100--Sobic009G030300 Sobic003G115100--Sobic007G195400 Sobic004G013600 Sobic004G013600 Sobic003G115100--Sobic004G013600 Sobic005G216300 Sobic005G216300 Sobic003G115100--Sobic005G216300 Sobic003G115100--Sobic002G058300 Sobic004G011000 Sobic004G011000 Sobic003G115100--Sobic004G011000
Octagon: transcription factors


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