Gene annotation
Transcriptome id Sobic.004G241400.1
Synonym Sb04g028220
Functional annotation DCN1-like protein 2, putative, expressed
UniProt C5XYV9
Pfam PF14555 PF03556
Panther DB PTHR12281
NCBI CDD KOG3077; Uncharacterized conserved protein
KEGG Orthology K17822; DCN1-like protein 1/2
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G12760 : -
RAP-DB (Rice) LOC_Os06g12690.1 : DCN1-like protein 2, putative, expressed
MaizeGDB (Corn) Zm00025a033215 , Zm00025a042620
Brachypodium -
Barley -
Wheat TraesCS5A02G109900 , TraesCS5B02G115600 , TraesCS5B02G115600
Populus -


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cDNA sequences
Sobic.004G241400


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G011400 armadillo/beta-catenin repeat family protein, putative, expressed -
2 Sobic.001G090400 PHD-finger domain containing protein, putative, expressed K11346: inhibitor of growth protein 4
3 Sobic.001G408700 kinesin like protein, putative, expressed K18182: cytochrome c oxidase assembly protein subunit 16
4 Sobic.002G197100 RAD23 DNA repair protein, putative, expressed K10839: RAD23, UV excision repair protein RAD23
5 Sobic.003G289400 farnesyltransferase subunit beta, putative, expressed K05954: protein farnesyltransferase subunit beta
6 Sobic.002G157300 Ser/Thr protein phosphatase family protein, putative, expressed K15423: serine/threonine-protein phosphatase 4 catalytic subunit
7 Sobic.003G359300 ELM2 domain containing protein, putative, expressed -
8 Sobic.003G176400 - -
9 Sobic.004G345700 TBC domain containing protein, expressed -
10 Sobic.008G117200 RING finger and CHY zinc finger domain-containing protein 1, putative, expressed K10144: RCHY1, RING finger and CHY zinc finger domain-containing protein 1
11 Sobic.010G033400 splicing factor, putative, expressed K12850: pre-mRNA-splicing factor 38B
12 Sobic.006G060100 glutaredoxin, putative, expressed K17479: glutaredoxin domain-containing cysteine-rich protein 1
13 Sobic.006G173100 pre-mRNA-processing factor 31, putative, expressed K12844: U4/U6 small nuclear ribonucleoprotein PRP31
14 Sobic.006G046700 vacuolar protein sorting-associated protein 11, putative, expressed -
15 Sobic.005G149500 palmitoyltransferase TIP1, putative, expressed K18932: palmitoyltransferase
16 Sobic.001G094000 expressed protein -
17 Sobic.001G514000 OsFBL10 - F-box domain and LRR containing protein, expressed -
18 Sobic.004G007300 expressed protein -
19 Sobic.006G013500 hydrolase/ zinc ion binding protein, putative, expressed K15442: TAD3, tRNA-specific adenosine deaminase 3
20 Sobic.003G433500 Putative splicing factor(PubMedID : 24356560)@serine/arginine repetitive matrix protein 1, putative, expressed K14325: RNA-binding protein with serine-rich domain 1


Gene co-expression network
sample Sobic004G241400 Sobic004G241400 Sobic007G011400 Sobic007G011400 Sobic004G241400--Sobic007G011400 Sobic001G090400 Sobic001G090400 Sobic004G241400--Sobic001G090400 Sobic001G408700 Sobic001G408700 Sobic004G241400--Sobic001G408700 Sobic002G197100 Sobic002G197100 Sobic004G241400--Sobic002G197100 Sobic003G289400 Sobic003G289400 Sobic004G241400--Sobic003G289400 Sobic002G157300 Sobic002G157300 Sobic004G241400--Sobic002G157300 Sobic003G359300 Sobic003G359300 Sobic004G241400--Sobic003G359300 Sobic003G176400 Sobic003G176400 Sobic004G241400--Sobic003G176400 Sobic004G345700 Sobic004G345700 Sobic004G241400--Sobic004G345700 Sobic001G094000 Sobic001G094000 Sobic007G011400--Sobic001G094000 Sobic007G205800 Sobic007G205800 Sobic007G011400--Sobic007G205800 Sobic007G011400--Sobic002G157300 Sobic010G263800 Sobic010G263800 Sobic007G011400--Sobic010G263800 Sobic002G313300 Sobic002G313300 Sobic007G011400--Sobic002G313300 Sobic009G040700 Sobic009G040700 Sobic007G011400--Sobic009G040700 Sobic002G157000 Sobic002G157000 Sobic007G011400--Sobic002G157000 Sobic001G162300 Sobic001G162300 Sobic007G011400--Sobic001G162300 Sobic008G034600 Sobic008G034600 Sobic007G011400--Sobic008G034600 Sobic008G067600 Sobic008G067600 Sobic001G090400--Sobic008G067600 Sobic006G173100 Sobic006G173100 Sobic001G090400--Sobic006G173100 Sobic004G057400 Sobic004G057400 Sobic001G090400--Sobic004G057400 Sobic001G176200 Sobic001G176200 Sobic001G090400--Sobic001G176200 Sobic002G320500 Sobic002G320500 Sobic001G090400--Sobic002G320500 Sobic009G000500 Sobic009G000500 Sobic001G090400--Sobic009G000500 Sobic001G090400--Sobic002G157300 Sobic004G205600 Sobic004G205600 Sobic001G090400--Sobic004G205600 Sobic002G248400 Sobic002G248400 Sobic001G090400--Sobic002G248400 Sobic003G205501 Sobic003G205501 Sobic001G408700--Sobic003G205501 Sobic004G007300 Sobic004G007300 Sobic001G408700--Sobic004G007300 Sobic001G408700--Sobic004G345700 Sobic001G056200 Sobic001G056200 Sobic001G408700--Sobic001G056200 Sobic007G118200 Sobic007G118200 Sobic001G408700--Sobic007G118200 Sobic006G267300 Sobic006G267300 Sobic001G408700--Sobic006G267300 Sobic001G408700--Sobic002G197100 Sobic004G283000 Sobic004G283000 Sobic001G408700--Sobic004G283000 Sobic010G245000 Sobic010G245000 Sobic001G408700--Sobic010G245000 Sobic002G197100--Sobic004G007300 Sobic002G197100--Sobic006G173100 Sobic002G197100--Sobic004G345700 Sobic002G197100--Sobic001G176200 Sobic002G197100--Sobic001G090400 Sobic001G425000 Sobic001G425000 Sobic002G197100--Sobic001G425000 Sobic003G248500 Sobic003G248500 Sobic002G197100--Sobic003G248500 Sobic001G514000 Sobic001G514000 Sobic002G197100--Sobic001G514000 Sobic002G370900 Sobic002G370900 Sobic002G197100--Sobic002G370900 Sobic003G289400--Sobic006G173100 Sobic003G289400--Sobic007G118200 Sobic001G091400 Sobic001G091400 Sobic003G289400--Sobic001G091400 Sobic003G289400--Sobic010G245000 Sobic003G289400--Sobic001G090400 Sobic003G081000 Sobic003G081000 Sobic003G289400--Sobic003G081000 Sobic006G195700 Sobic006G195700 Sobic003G289400--Sobic006G195700 Sobic008G014500 Sobic008G014500 Sobic003G289400--Sobic008G014500 Sobic003G289400--Sobic001G408700 Sobic010G026400 Sobic010G026400 Sobic002G157300--Sobic010G026400 Sobic003G187400 Sobic003G187400 Sobic002G157300--Sobic003G187400 Sobic002G157300--Sobic007G011400 Sobic005G149500 Sobic005G149500 Sobic002G157300--Sobic005G149500 Sobic002G157300--Sobic001G094000 Sobic010G260500 Sobic010G260500 Sobic002G157300--Sobic010G260500 Sobic007G185900 Sobic007G185900 Sobic002G157300--Sobic007G185900 Sobic002G157300--Sobic010G263800 Sobic002G157300--Sobic006G173100 Sobic010G033400 Sobic010G033400 Sobic003G359300--Sobic010G033400 Sobic004G263900 Sobic004G263900 Sobic003G359300--Sobic004G263900 Sobic003G359300--Sobic003G248500 Sobic007G063200 Sobic007G063200 Sobic003G359300--Sobic007G063200 Sobic001G028400 Sobic001G028400 Sobic003G359300--Sobic001G028400 Sobic008G174300 Sobic008G174300 Sobic003G359300--Sobic008G174300 Sobic003G359300--Sobic001G056200 Sobic002G365100 Sobic002G365100 Sobic003G359300--Sobic002G365100 Sobic002G058300 Sobic002G058300 Sobic003G359300--Sobic002G058300 Sobic006G060100 Sobic006G060100 Sobic003G176400--Sobic006G060100 Sobic003G176400--Sobic001G094000 Sobic003G176400--Sobic002G157300 Sobic003G176400--Sobic009G040700 Sobic006G080300 Sobic006G080300 Sobic003G176400--Sobic006G080300 Sobic007G079200 Sobic007G079200 Sobic003G176400--Sobic007G079200 Sobic008G084700 Sobic008G084700 Sobic003G176400--Sobic008G084700 Sobic003G268300 Sobic003G268300 Sobic003G176400--Sobic003G268300 Sobic007G178700 Sobic007G178700 Sobic003G176400--Sobic007G178700 Sobic004G345700--Sobic002G197100 Sobic004G345700--Sobic001G514000 Sobic004G345700--Sobic004G007300 Sobic004G345700--Sobic001G408700 Sobic005G154500 Sobic005G154500 Sobic004G345700--Sobic005G154500 Sobic004G345700--Sobic001G176200 Sobic006G092800 Sobic006G092800 Sobic004G345700--Sobic006G092800 Sobic004G345700--Sobic003G205501 Sobic004G345700--Sobic010G245000
Octagon: transcription factors


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