Gene annotation
Transcriptome id Sobic.006G060100.4,Sobic.006G060100.5,Sobic.006G060100.6,Sobic.006G060100.2,Sobic.006G060100.3
Synonym
Functional annotation glutaredoxin, putative, expressed
UniProt A0A1Z5RCY4
Pfam -
Panther DB PTHR10168 PTHR10168:SF95 PTHR10168:SF95 PTHR10168
NCBI CDD -
KEGG Orthology K17479; glutaredoxin domain-containing cysteine-rich protein 1
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G58530 : Glutaredoxin family protein
RAP-DB (Rice) LOC_Os05g39450.1 : glutaredoxin, putative, expressed
MaizeGDB (Corn) Zm00025a043958 , Zm00025a039737 , Zm00025a037771
Brachypodium -
Barley HORVU3Hr1G087930.1
Wheat TraesCS3D02G343100
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G187400 - K12823: DDX5, ATP-dependent RNA helicase DDX5/DBP2
2 Sobic.003G268300 surp module family protein, putative, expressed -
3 Sobic.005G149500 palmitoyltransferase TIP1, putative, expressed K18932: palmitoyltransferase
4 Sobic.003G176400 - -
5 Sobic.001G094000 expressed protein -
6 Sobic.003G422300 recA protein, expressed K03553: recombination protein RecA
7 Sobic.006G080300 SET domain containing protein, expressed -
8 Sobic.002G157300 Ser/Thr protein phosphatase family protein, putative, expressed K15423: serine/threonine-protein phosphatase 4 catalytic subunit
9 Sobic.007G011400 armadillo/beta-catenin repeat family protein, putative, expressed -
10 Sobic.009G040700 "OsPPKL2(Ortholog in rice:Zhan et al., 2012)"(PubMedID : 31659919)@serine/threonine protein phosphatase, putative, expressed K01090: protein phosphatase
11 Sobic.009G127900 - -
12 Sobic.007G178700 - -
13 Sobic.004G196700 expressed protein -
14 Sobic.007G137900 nucleoside-triphosphatase, putative, expressed K01510: ENTPD1_3_8, apyrase
15 Sobic.003G200200 SIT4 phosphatase-associated protein domain containing protein, expressed K15501: PPP6R3, serine/threonine-protein phosphatase 6 regulatory subunit 3
16 Sobic.002G157000 enhancer of polycomb, putative, expressed K11322: enhancer of polycomb-like protein
17 Sobic.001G162300 KH domain containing protein, putative, expressed K13162: poly(rC)-binding protein 2
18 Sobic.001G251700 OsPP2Ac-4 - Phosphatase 2A isoform 4 belonging to family 2, expressed K04382: serine/threonine-protein phosphatase 2A catalytic subunit
19 Sobic.001G420200 RNA recognition motif containing protein, putative, expressed K11093: U1 small nuclear ribonucleoprotein 70kDa
20 Sobic.007G096600 - -


Gene co-expression network
sample Sobic006G060100 Sobic006G060100 Sobic003G187400 Sobic003G187400 Sobic006G060100--Sobic003G187400 Sobic003G268300 Sobic003G268300 Sobic006G060100--Sobic003G268300 Sobic005G149500 Sobic005G149500 Sobic006G060100--Sobic005G149500 Sobic003G176400 Sobic003G176400 Sobic006G060100--Sobic003G176400 Sobic001G094000 Sobic001G094000 Sobic006G060100--Sobic001G094000 Sobic003G422300 Sobic003G422300 Sobic006G060100--Sobic003G422300 Sobic006G080300 Sobic006G080300 Sobic006G060100--Sobic006G080300 Sobic002G157300 Sobic002G157300 Sobic006G060100--Sobic002G157300 Sobic007G011400 Sobic007G011400 Sobic006G060100--Sobic007G011400 Sobic003G187400--Sobic002G157300 Sobic003G187400--Sobic005G149500 Sobic009G040700 Sobic009G040700 Sobic003G187400--Sobic009G040700 Sobic003G187400--Sobic001G094000 Sobic006G173100 Sobic006G173100 Sobic003G187400--Sobic006G173100 Sobic003G187400--Sobic006G060100 Sobic003G401000 Sobic003G401000 Sobic003G187400--Sobic003G401000 Sobic004G196700 Sobic004G196700 Sobic003G187400--Sobic004G196700 Sobic007G104800 Sobic007G104800 Sobic003G187400--Sobic007G104800 Sobic007G096600 Sobic007G096600 Sobic003G268300--Sobic007G096600 Sobic002G157000 Sobic002G157000 Sobic003G268300--Sobic002G157000 Sobic001G420200 Sobic001G420200 Sobic003G268300--Sobic001G420200 Sobic003G200200 Sobic003G200200 Sobic003G268300--Sobic003G200200 Sobic002G248400 Sobic002G248400 Sobic003G268300--Sobic002G248400 Sobic009G127900 Sobic009G127900 Sobic003G268300--Sobic009G127900 Sobic007G178700 Sobic007G178700 Sobic003G268300--Sobic007G178700 Sobic007G037900 Sobic007G037900 Sobic003G268300--Sobic007G037900 Sobic008G173900 Sobic008G173900 Sobic003G268300--Sobic008G173900 Sobic005G149500--Sobic003G187400 Sobic005G149500--Sobic002G157300 Sobic005G149500--Sobic009G040700 Sobic005G149500--Sobic004G196700 Sobic005G149500--Sobic007G011400 Sobic005G149500--Sobic006G060100 Sobic007G185900 Sobic007G185900 Sobic005G149500--Sobic007G185900 Sobic007G137900 Sobic007G137900 Sobic005G149500--Sobic007G137900 Sobic007G078000 Sobic007G078000 Sobic005G149500--Sobic007G078000 Sobic003G176400--Sobic006G060100 Sobic003G176400--Sobic001G094000 Sobic003G176400--Sobic002G157300 Sobic003G176400--Sobic009G040700 Sobic003G176400--Sobic006G080300 Sobic007G079200 Sobic007G079200 Sobic003G176400--Sobic007G079200 Sobic008G084700 Sobic008G084700 Sobic003G176400--Sobic008G084700 Sobic003G176400--Sobic003G268300 Sobic003G176400--Sobic007G178700 Sobic001G094000--Sobic007G011400 Sobic001G094000--Sobic009G040700 Sobic001G477800 Sobic001G477800 Sobic001G094000--Sobic001G477800 Sobic001G094000--Sobic002G157000 Sobic001G094000--Sobic003G268300 Sobic001G094000--Sobic002G157300 Sobic001G094000--Sobic003G187400 Sobic004G031700 Sobic004G031700 Sobic001G094000--Sobic004G031700 Sobic001G094000--Sobic006G080300 Sobic003G422300--Sobic003G268300 Sobic003G422300--Sobic002G248400 Sobic006G128900 Sobic006G128900 Sobic003G422300--Sobic006G128900 Sobic003G422300--Sobic001G094000 Sobic003G422300--Sobic002G157000 Sobic001G090400 Sobic001G090400 Sobic003G422300--Sobic001G090400 Sobic003G422300--Sobic006G060100 Sobic001G511500 Sobic001G511500 Sobic003G422300--Sobic001G511500 Sobic008G078100 Sobic008G078100 Sobic003G422300--Sobic008G078100 Sobic006G080300--Sobic003G268300 Sobic006G080300--Sobic004G031700 Sobic006G080300--Sobic001G094000 Sobic006G080300--Sobic001G477800 Sobic002G313300 Sobic002G313300 Sobic006G080300--Sobic002G313300 Sobic001G206100 Sobic001G206100 Sobic006G080300--Sobic001G206100 Sobic006G080300--Sobic002G157000 Sobic003G170100 Sobic003G170100 Sobic006G080300--Sobic003G170100 Sobic001G257300 Sobic001G257300 Sobic006G080300--Sobic001G257300 Sobic010G026400 Sobic010G026400 Sobic002G157300--Sobic010G026400 Sobic002G157300--Sobic003G187400 Sobic002G157300--Sobic007G011400 Sobic002G157300--Sobic005G149500 Sobic002G157300--Sobic001G094000 Sobic010G260500 Sobic010G260500 Sobic002G157300--Sobic010G260500 Sobic002G157300--Sobic007G185900 Sobic010G263800 Sobic010G263800 Sobic002G157300--Sobic010G263800 Sobic002G157300--Sobic006G173100 Sobic007G011400--Sobic001G094000 Sobic007G205800 Sobic007G205800 Sobic007G011400--Sobic007G205800 Sobic007G011400--Sobic002G157300 Sobic007G011400--Sobic010G263800 Sobic007G011400--Sobic002G313300 Sobic007G011400--Sobic009G040700 Sobic007G011400--Sobic002G157000 Sobic001G162300 Sobic001G162300 Sobic007G011400--Sobic001G162300 Sobic008G034600 Sobic008G034600 Sobic007G011400--Sobic008G034600
Octagon: transcription factors


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