Gene annotation
Transcriptome id Sobic.003G248100.4,Sobic.003G248100.1,Sobic.003G248100.3,Sobic.003G248100.2
Synonym ATMPK20, MPK20, Sb03g030450
Functional annotation CGMC_MAPKCMGC_2.6 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed
UniProt A0A1B6Q551 , A0A1B6Q556 , A0A1B6Q557
Pfam PF06293
Panther DB PTHR24055 PTHR24055:SF219
NCBI CDD -
KEGG Orthology K04371; ERK, mitogen-activated protein kinase 1/3
Gene Ontology GO:0016773; phosphotransferase activity, alcohol group as acceptor GO:0016020membrane GO:0005524ATP binding


Orthologs (automatic annotation)
TAIR AT2G42880 : MAP kinase 20
RAP-DB (Rice) LOC_Os01g47530.1,LOC_Os01g47530.2 : CGMC_MAPKCMGC_2.6 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed
MaizeGDB (Corn) Zm00025a038743 , Zm00025a028140 , Zm00025a036716 , Zm00025a044590
Brachypodium KQK04843 , KQK04845 , KQK04844 , KQK09033 , KQK09073 , PNT70695 , PNT70696
Barley HORVU1Hr1G088510.11 , HORVU1Hr1G088510.10 , HORVU1Hr1G088510.13 , HORVU1Hr1G088510.12 , HORVU1Hr1G088510.15 , HORVU1Hr1G088510.14 , HORVU1Hr1G088510.17 , HORVU1Hr1G088510.16 , HORVU1Hr1G088510.18 , HORVU3Hr1G060390.5 , HORVU3Hr1G060390.3 , HORVU3Hr1G060390.2 , HORVU3Hr1G060390.1 , HORVU3Hr1G060390.9 , HORVU3Hr1G060390.8 , HORVU3Hr1G060390.7 , HORVU3Hr1G060390.6 , HORVU3Hr1G060390.4 , HORVU1Hr1G088510.5 , HORVU1Hr1G088510.4 , HORVU1Hr1G088510.7 , HORVU1Hr1G088510.6 , HORVU1Hr1G088510.1 , HORVU1Hr1G088510.3 , HORVU1Hr1G088510.2 , HORVU1Hr1G088510.9 , HORVU1Hr1G088510.8 , HORVU3Hr1G060390.18 , HORVU3Hr1G060390.17 , HORVU3Hr1G060390.16 , HORVU3Hr1G060390.15 , HORVU3Hr1G060390.14 , HORVU3Hr1G060390.13 , HORVU3Hr1G060390.12 , HORVU3Hr1G060390.11 , HORVU3Hr1G060390.10
Wheat TraesCS1B02G431400 , TraesCS1B02G431400 , TraesCS1A02G402400 , TraesCS1A02G402400 , TraesCS3A02G242100 , TraesCS3D02G242200 , TraesCS3D02G242200 , TraesCS3B02G270200 , TraesCS3A02G242100
Populus PNT37673 , PNT37674 , PNT48084 , PNT48083


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cDNA sequences
Sobic.003G248100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G030700 expressed protein -
2 Sobic.001G251700 OsPP2Ac-4 - Phosphatase 2A isoform 4 belonging to family 2, expressed K04382: serine/threonine-protein phosphatase 2A catalytic subunit
3 Sobic.005G013200 BAH domain containing protein, expressed -
4 Sobic.006G246900 expressed protein -
5 Sobic.004G219100 phosphatidylinositol N-acetylglucosaminyltransferase subunit C, putative, expressed K03859: PIGC, phosphatidylinositol N-acetylglucosaminyltransferase subunit C
6 Sobic.001G049600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@squalene synthetase, putative, expressed K00801: farnesyl-diphosphate farnesyltransferase
7 Sobic.005G154500 OsFBX407 - F-box domain containing protein, expressed -
8 Sobic.005G015900 dnaJ domain containing protein, expressed -
9 Sobic.001G176200 FHA domain containing protein, putative, expressed K13216: PPP1R8, nuclear inhibitor of protein phosphatase 1
10 Sobic.003G261300 arginine/serine-rich coiled-coil protein 1, putative, expressed -
11 Sobic.007G011400 armadillo/beta-catenin repeat family protein, putative, expressed -
12 Sobic.010G074500 -(PubMedID : 26320239)@phosphopantothenoylcysteine decarboxylase, putative, expressed K01598: PPCDC, phosphopantothenoylcysteine decarboxylase
13 Sobic.001G407200 SacI homology domain containing protein, expressed -
14 Sobic.002G076400 structural constituent of ribosome, putative, expressed -
15 Sobic.008G167300 NBS-LRR disease resistance protein, putative, expressed -
16 Sobic.003G117700 zinc finger C-x8-C-x5-C-x3-H type family protein, expressed -
17 Sobic.002G186000 CD2-binding protein-related, putative, expressed K13099: CD2BP2, CD2 antigen cytoplasmic tail-binding protein 2
18 Sobic.003G200200 SIT4 phosphatase-associated protein domain containing protein, expressed K15501: PPP6R3, serine/threonine-protein phosphatase 6 regulatory subunit 3
19 Sobic.001G477800 expressed protein -
20 Sobic.006G032400 expressed protein -


Gene co-expression network
sample Sobic003G248100 Sobic003G248100 Sobic004G030700 Sobic004G030700 Sobic003G248100--Sobic004G030700 Sobic001G251700 Sobic001G251700 Sobic003G248100--Sobic001G251700 Sobic005G013200 Sobic005G013200 Sobic003G248100--Sobic005G013200 Sobic006G246900 Sobic006G246900 Sobic003G248100--Sobic006G246900 Sobic004G219100 Sobic004G219100 Sobic003G248100--Sobic004G219100 Sobic001G049600 Sobic001G049600 Sobic003G248100--Sobic001G049600 Sobic005G154500 Sobic005G154500 Sobic003G248100--Sobic005G154500 Sobic005G015900 Sobic005G015900 Sobic003G248100--Sobic005G015900 Sobic001G176200 Sobic001G176200 Sobic003G248100--Sobic001G176200 Sobic007G011400 Sobic007G011400 Sobic004G030700--Sobic007G011400 Sobic002G186000 Sobic002G186000 Sobic004G030700--Sobic002G186000 Sobic002G049000 Sobic002G049000 Sobic004G030700--Sobic002G049000 Sobic008G116500 Sobic008G116500 Sobic004G030700--Sobic008G116500 Sobic001G094000 Sobic001G094000 Sobic004G030700--Sobic001G094000 Sobic002G058300 Sobic002G058300 Sobic004G030700--Sobic002G058300 Sobic010G074500 Sobic010G074500 Sobic004G030700--Sobic010G074500 Sobic004G030700--Sobic001G251700 Sobic003G346000 Sobic003G346000 Sobic004G030700--Sobic003G346000 Sobic007G137900 Sobic007G137900 Sobic001G251700--Sobic007G137900 Sobic003G200200 Sobic003G200200 Sobic001G251700--Sobic003G200200 Sobic002G157300 Sobic002G157300 Sobic001G251700--Sobic002G157300 Sobic002G157000 Sobic002G157000 Sobic001G251700--Sobic002G157000 Sobic006G082600 Sobic006G082600 Sobic001G251700--Sobic006G082600 Sobic002G248400 Sobic002G248400 Sobic001G251700--Sobic002G248400 Sobic002G320500 Sobic002G320500 Sobic001G251700--Sobic002G320500 Sobic003G268300 Sobic003G268300 Sobic001G251700--Sobic003G268300 Sobic003G220200 Sobic003G220200 Sobic001G251700--Sobic003G220200 Sobic002G103600 Sobic002G103600 Sobic005G013200--Sobic002G103600 Sobic010G129200 Sobic010G129200 Sobic005G013200--Sobic010G129200 Sobic008G162900 Sobic008G162900 Sobic005G013200--Sobic008G162900 Sobic001G407200 Sobic001G407200 Sobic005G013200--Sobic001G407200 Sobic001G222500 Sobic001G222500 Sobic005G013200--Sobic001G222500 Sobic002G408200 Sobic002G408200 Sobic005G013200--Sobic002G408200 Sobic008G028700 Sobic008G028700 Sobic005G013200--Sobic008G028700 Sobic005G013200--Sobic001G251700 Sobic004G084300 Sobic004G084300 Sobic005G013200--Sobic004G084300 Sobic001G162300 Sobic001G162300 Sobic006G246900--Sobic001G162300 Sobic006G246900--Sobic003G268300 Sobic007G037900 Sobic007G037900 Sobic006G246900--Sobic007G037900 Sobic006G246900--Sobic001G094000 Sobic006G246900--Sobic002G157000 Sobic009G134500 Sobic009G134500 Sobic006G246900--Sobic009G134500 Sobic008G063000 Sobic008G063000 Sobic006G246900--Sobic008G063000 Sobic001G477800 Sobic001G477800 Sobic006G246900--Sobic001G477800 Sobic006G246900--Sobic007G011400 Sobic004G219100--Sobic005G015900 Sobic004G219100--Sobic001G407200 Sobic004G219100--Sobic005G013200 Sobic004G219100--Sobic002G320500 Sobic002G158700 Sobic002G158700 Sobic004G219100--Sobic002G158700 Sobic004G219100--Sobic010G129200 Sobic006G032400 Sobic006G032400 Sobic004G219100--Sobic006G032400 Sobic008G149800 Sobic008G149800 Sobic004G219100--Sobic008G149800 Sobic001G303675 Sobic001G303675 Sobic004G219100--Sobic001G303675 Sobic004G061900 Sobic004G061900 Sobic001G049600--Sobic004G061900 Sobic004G242700 Sobic004G242700 Sobic001G049600--Sobic004G242700 Sobic002G033600 Sobic002G033600 Sobic001G049600--Sobic002G033600 Sobic002G076400 Sobic002G076400 Sobic001G049600--Sobic002G076400 Sobic007G188900 Sobic007G188900 Sobic001G049600--Sobic007G188900 Sobic007G191100 Sobic007G191100 Sobic001G049600--Sobic007G191100 Sobic006G092800 Sobic006G092800 Sobic001G049600--Sobic006G092800 Sobic001G049600--Sobic004G030700 Sobic006G262600 Sobic006G262600 Sobic001G049600--Sobic006G262600 Sobic005G154500--Sobic001G176200 Sobic004G345700 Sobic004G345700 Sobic005G154500--Sobic004G345700 Sobic003G241200 Sobic003G241200 Sobic005G154500--Sobic003G241200 Sobic010G245000 Sobic010G245000 Sobic005G154500--Sobic010G245000 Sobic005G154500--Sobic008G149800 Sobic008G173100 Sobic008G173100 Sobic005G154500--Sobic008G173100 Sobic005G154500--Sobic005G015900 Sobic002G357700 Sobic002G357700 Sobic005G154500--Sobic002G357700 Sobic006G116100 Sobic006G116100 Sobic005G154500--Sobic006G116100 Sobic005G015900--Sobic006G032400 Sobic004G031700 Sobic004G031700 Sobic005G015900--Sobic004G031700 Sobic005G015900--Sobic004G219100 Sobic005G015900--Sobic001G176200 Sobic005G015900--Sobic002G320500 Sobic001G090400 Sobic001G090400 Sobic005G015900--Sobic001G090400 Sobic005G015900--Sobic002G158700 Sobic005G015900--Sobic001G303675 Sobic003G445400 Sobic003G445400 Sobic005G015900--Sobic003G445400 Sobic001G176200--Sobic001G090400 Sobic002G370900 Sobic002G370900 Sobic001G176200--Sobic002G370900 Sobic002G197100 Sobic002G197100 Sobic001G176200--Sobic002G197100 Sobic001G176200--Sobic005G154500 Sobic001G176200--Sobic005G015900 Sobic001G176200--Sobic004G345700 Sobic006G173100 Sobic006G173100 Sobic001G176200--Sobic006G173100 Sobic001G176200--Sobic010G245000 Sobic001G176200--Sobic002G320500
Octagon: transcription factors


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