Gene annotation
Transcriptome id Sobic.005G110544.1
Synonym -
Functional annotation -
UniProt C6JS31
Pfam -
Panther DB PTHR15852 PTHR15852:SF20
NCBI CDD KOG2813; Predicted molecular chaperone, contains DnaJ domain
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G38000 : chaperone protein dnaJ-related
RAP-DB (Rice) LOC_Os05g25210.1 : expressed protein
MaizeGDB (Corn) Zm00025a029739
Brachypodium KQK06917
Barley HORVU2Hr1G024150.1 , HORVU2Hr1G024150.2 , HORVU2Hr1G024150.3 , HORVU2Hr1G024150.4 , HORVU2Hr1G024150.5 , HORVU2Hr1G024150.6 , HORVU2Hr1G024150.7
Wheat TraesCS2B02G160700 , TraesCS2D02G139500 , TraesCS2B02G160600 , TraesCS2D02G139400
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G187400 - K12823: DDX5, ATP-dependent RNA helicase DDX5/DBP2
2 Sobic.008G078100 EDM2, putative, expressed -
3 Sobic.001G094000 expressed protein -
4 Sobic.006G165000 RNA recognition motif containing protein, expressed -
5 Sobic.007G011400 armadillo/beta-catenin repeat family protein, putative, expressed -
6 Sobic.002G186000 CD2-binding protein-related, putative, expressed K13099: CD2BP2, CD2 antigen cytoplasmic tail-binding protein 2
7 Sobic.008G136200 spotted leaf 11, putative, expressed -
8 Sobic.004G345700 TBC domain containing protein, expressed -
9 Sobic.009G040700 "OsPPKL2(Ortholog in rice:Zhan et al., 2012)"(PubMedID : 31659919)@serine/threonine protein phosphatase, putative, expressed K01090: protein phosphatase
10 Sobic.008G054500 WD domain, G-beta repeat domain containing protein, expressed -
11 Sobic.003G401000 adaptin, putative, expressed K12400: AP-4 complex subunit epsilon-1
12 Sobic.004G061900 Sad1 / UNC-like C-terminal domain containing protein, putative, expressed K19347: SUN domain-containing protein 1/2
13 Sobic.001G090400 PHD-finger domain containing protein, putative, expressed K11346: inhibitor of growth protein 4
14 Sobic.003G220200 protein kinase family protein, putative, expressed K17541: SCY1-like protein 2
15 Sobic.005G149500 palmitoyltransferase TIP1, putative, expressed K18932: palmitoyltransferase
16 Sobic.001G176200 FHA domain containing protein, putative, expressed K13216: PPP1R8, nuclear inhibitor of protein phosphatase 1
17 Sobic.002G157300 Ser/Thr protein phosphatase family protein, putative, expressed K15423: serine/threonine-protein phosphatase 4 catalytic subunit
18 Sobic.006G028200 glycine-rich protein, putative, expressed -
19 Sobic.008G041700 TLD family protein, putative, expressed -
20 Sobic.003G200200 SIT4 phosphatase-associated protein domain containing protein, expressed K15501: PPP6R3, serine/threonine-protein phosphatase 6 regulatory subunit 3


Gene co-expression network
sample Sobic005G110544 Sobic005G110544 Sobic003G187400 Sobic003G187400 Sobic005G110544--Sobic003G187400 Sobic008G078100 Sobic008G078100 Sobic005G110544--Sobic008G078100 Sobic001G094000 Sobic001G094000 Sobic005G110544--Sobic001G094000 Sobic006G165000 Sobic006G165000 Sobic005G110544--Sobic006G165000 Sobic007G011400 Sobic007G011400 Sobic005G110544--Sobic007G011400 Sobic002G186000 Sobic002G186000 Sobic005G110544--Sobic002G186000 Sobic008G136200 Sobic008G136200 Sobic005G110544--Sobic008G136200 Sobic004G345700 Sobic004G345700 Sobic005G110544--Sobic004G345700 Sobic009G040700 Sobic009G040700 Sobic005G110544--Sobic009G040700 Sobic002G157300 Sobic002G157300 Sobic003G187400--Sobic002G157300 Sobic005G149500 Sobic005G149500 Sobic003G187400--Sobic005G149500 Sobic003G187400--Sobic009G040700 Sobic003G187400--Sobic001G094000 Sobic006G173100 Sobic006G173100 Sobic003G187400--Sobic006G173100 Sobic006G060100 Sobic006G060100 Sobic003G187400--Sobic006G060100 Sobic003G401000 Sobic003G401000 Sobic003G187400--Sobic003G401000 Sobic004G196700 Sobic004G196700 Sobic003G187400--Sobic004G196700 Sobic007G104800 Sobic007G104800 Sobic003G187400--Sobic007G104800 Sobic008G078100--Sobic001G094000 Sobic008G054500 Sobic008G054500 Sobic008G078100--Sobic008G054500 Sobic008G078100--Sobic009G040700 Sobic001G477800 Sobic001G477800 Sobic008G078100--Sobic001G477800 Sobic008G078100--Sobic003G187400 Sobic001G544200 Sobic001G544200 Sobic008G078100--Sobic001G544200 Sobic007G185900 Sobic007G185900 Sobic008G078100--Sobic007G185900 Sobic003G422300 Sobic003G422300 Sobic008G078100--Sobic003G422300 Sobic008G078100--Sobic004G196700 Sobic001G094000--Sobic007G011400 Sobic001G094000--Sobic009G040700 Sobic001G094000--Sobic001G477800 Sobic002G157000 Sobic002G157000 Sobic001G094000--Sobic002G157000 Sobic003G268300 Sobic003G268300 Sobic001G094000--Sobic003G268300 Sobic001G094000--Sobic002G157300 Sobic001G094000--Sobic003G187400 Sobic004G031700 Sobic004G031700 Sobic001G094000--Sobic004G031700 Sobic006G080300 Sobic006G080300 Sobic001G094000--Sobic006G080300 Sobic003G241200 Sobic003G241200 Sobic006G165000--Sobic003G241200 Sobic001G155000 Sobic001G155000 Sobic006G165000--Sobic001G155000 Sobic003G084900 Sobic003G084900 Sobic006G165000--Sobic003G084900 Sobic003G200200 Sobic003G200200 Sobic006G165000--Sobic003G200200 Sobic010G028800 Sobic010G028800 Sobic006G165000--Sobic010G028800 Sobic004G145500 Sobic004G145500 Sobic006G165000--Sobic004G145500 Sobic009G126600 Sobic009G126600 Sobic006G165000--Sobic009G126600 Sobic001G222500 Sobic001G222500 Sobic006G165000--Sobic001G222500 Sobic006G032400 Sobic006G032400 Sobic006G165000--Sobic006G032400 Sobic007G011400--Sobic001G094000 Sobic007G205800 Sobic007G205800 Sobic007G011400--Sobic007G205800 Sobic007G011400--Sobic002G157300 Sobic010G263800 Sobic010G263800 Sobic007G011400--Sobic010G263800 Sobic002G313300 Sobic002G313300 Sobic007G011400--Sobic002G313300 Sobic007G011400--Sobic009G040700 Sobic007G011400--Sobic002G157000 Sobic001G162300 Sobic001G162300 Sobic007G011400--Sobic001G162300 Sobic008G034600 Sobic008G034600 Sobic007G011400--Sobic008G034600 Sobic003G197800 Sobic003G197800 Sobic002G186000--Sobic003G197800 Sobic002G186000--Sobic002G157000 Sobic002G248400 Sobic002G248400 Sobic002G186000--Sobic002G248400 Sobic002G186000--Sobic001G094000 Sobic002G186000--Sobic003G200200 Sobic002G186000--Sobic007G011400 Sobic002G058300 Sobic002G058300 Sobic002G186000--Sobic002G058300 Sobic002G186000--Sobic001G162300 Sobic003G220200 Sobic003G220200 Sobic002G186000--Sobic003G220200 Sobic002G144933 Sobic002G144933 Sobic008G136200--Sobic002G144933 Sobic008G136200--Sobic007G205800 Sobic008G136200--Sobic007G011400 Sobic009G215800 Sobic009G215800 Sobic008G136200--Sobic009G215800 Sobic009G065100 Sobic009G065100 Sobic008G136200--Sobic009G065100 Sobic008G136200--Sobic001G094000 Sobic008G136200--Sobic002G157000 Sobic008G136200--Sobic003G197800 Sobic009G087800 Sobic009G087800 Sobic008G136200--Sobic009G087800 Sobic002G197100 Sobic002G197100 Sobic004G345700--Sobic002G197100 Sobic001G514000 Sobic001G514000 Sobic004G345700--Sobic001G514000 Sobic004G007300 Sobic004G007300 Sobic004G345700--Sobic004G007300 Sobic001G408700 Sobic001G408700 Sobic004G345700--Sobic001G408700 Sobic005G154500 Sobic005G154500 Sobic004G345700--Sobic005G154500 Sobic001G176200 Sobic001G176200 Sobic004G345700--Sobic001G176200 Sobic006G092800 Sobic006G092800 Sobic004G345700--Sobic006G092800 Sobic003G205501 Sobic003G205501 Sobic004G345700--Sobic003G205501 Sobic010G245000 Sobic010G245000 Sobic004G345700--Sobic010G245000 Sobic009G040700--Sobic001G094000 Sobic009G040700--Sobic003G187400 Sobic009G040700--Sobic005G149500 Sobic009G040700--Sobic007G011400 Sobic009G040700--Sobic002G157300 Sobic009G040700--Sobic001G477800 Sobic006G145000 Sobic006G145000 Sobic009G040700--Sobic006G145000 Sobic009G040700--Sobic004G196700 Sobic009G040700--Sobic008G078100
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.