Gene annotation
Transcriptome id Sobic.009G044900.1
Synonym FASS, FASS2, Sb09g003830, GDO, TON2, FS1, EMB40
Functional annotation serine/threonine-protein phosphatase 2A regulatory subunit B subunitgamma, putative, expressed
UniProt C5Z042
Pfam PF13499
Panther DB PTHR12085
NCBI CDD KOG2562; Protein phosphatase 2 regulatory subunit
KEGG Orthology K11583; serine/threonine-protein phosphatase 2A regulatory subunit B''
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G18580 : tonneau 2 (TON2)
RAP-DB (Rice) LOC_Os05g05710.1 : serine/threonine-protein phosphatase 2A regulatory subunit B subunitgamma, putative, expressed
MaizeGDB (Corn) Zm00025a003959 , Zm00025a038070 , Zm00025a055415 , Zm00025a046216
Brachypodium KQK07497
Barley -
Wheat TraesCS1B02G118200 , TraesCS1D02G098600 , TraesCS1A02G090100
Populus -


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cDNA sequences
Sobic.009G044900


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G030300 RNA polymerase II-associated protein 3, putative, expressed -
2 Sobic.002G089900 OsFBX237 - F-box domain containing protein, expressed -
3 Sobic.006G248500 expressed protein -
4 Sobic.003G433500 Putative splicing factor(PubMedID : 24356560)@serine/arginine repetitive matrix protein 1, putative, expressed K14325: RNA-binding protein with serine-rich domain 1
5 Sobic.002G177400 expressed protein -
6 Sobic.004G347100 DHHC zinc finger domain containing protein, expressed K18932: palmitoyltransferase
7 Sobic.001G469800 transcription initiation factor IIB, putative, expressed K03124: TFIIB, GTF2B, SUA7, transcription initiation factor TFIIB
8 Sobic.002G362300 prefoldin, putative, expressed -
9 Sobic.004G013600 autophagy protein 5, putative, expressed K08339: autophagy-related protein 5
10 Sobic.002G259800 hydroxyproline-rich glycoprotein family protein, putative, expressed -
11 Sobic.010G202600 zinc finger, C3HC4 type domain containing protein, expressed K10661: MARCH6, E3 ubiquitin-protein ligase MARCH6
12 Sobic.005G229000 Putative splicing factor(PubMedID : 24356560)@RNA recognition motif containing protein, expressed K12900: FUS-interacting serine-arginine-rich protein 1
13 Sobic.005G009200 expressed protein -
14 Sobic.002G334600 OsFBX251 - F-box domain containing protein, expressed -
15 Sobic.004G078100 zinc finger C-x8-C-x5-C-x3-H type family protein, expressed -
16 Sobic.006G210200 zinc finger domain, LSD1 subclass family protein, expressed -
17 Sobic.008G129700 PAPA-1-like conserved region family protein, expressed K11666: INO80B, ZNHIT4, INO80 complex subunit B
18 Sobic.001G226000 WD domain, G-beta repeat domain containing protein, expressed K10599: PRPF19, pre-mRNA-processing factor 19
19 Sobic.002G224700 NFKB, putative, expressed -
20 Sobic.002G061400 OsFBX237 - F-box domain containing protein, expressed -


Gene co-expression network
sample Sobic009G044900 Sobic009G044900 Sobic009G030300 Sobic009G030300 Sobic009G044900--Sobic009G030300 Sobic002G089900 Sobic002G089900 Sobic009G044900--Sobic002G089900 Sobic006G248500 Sobic006G248500 Sobic009G044900--Sobic006G248500 Sobic003G433500 Sobic003G433500 Sobic009G044900--Sobic003G433500 Sobic002G177400 Sobic002G177400 Sobic009G044900--Sobic002G177400 Sobic004G347100 Sobic004G347100 Sobic009G044900--Sobic004G347100 Sobic001G469800 Sobic001G469800 Sobic009G044900--Sobic001G469800 Sobic002G362300 Sobic002G362300 Sobic009G044900--Sobic002G362300 Sobic004G013600 Sobic004G013600 Sobic009G044900--Sobic004G013600 Sobic009G030300--Sobic002G177400 Sobic001G226000 Sobic001G226000 Sobic009G030300--Sobic001G226000 Sobic004G061900 Sobic004G061900 Sobic009G030300--Sobic004G061900 Sobic009G030300--Sobic009G044900 Sobic009G030300--Sobic004G013600 Sobic004G088400 Sobic004G088400 Sobic009G030300--Sobic004G088400 Sobic008G117200 Sobic008G117200 Sobic009G030300--Sobic008G117200 Sobic002G334600 Sobic002G334600 Sobic009G030300--Sobic002G334600 Sobic008G129700 Sobic008G129700 Sobic009G030300--Sobic008G129700 Sobic004G078100 Sobic004G078100 Sobic002G089900--Sobic004G078100 Sobic002G089900--Sobic009G044900 Sobic002G089900--Sobic003G433500 Sobic002G089900--Sobic006G248500 Sobic003G132700 Sobic003G132700 Sobic002G089900--Sobic003G132700 Sobic002G095700 Sobic002G095700 Sobic002G089900--Sobic002G095700 Sobic007G117100 Sobic007G117100 Sobic002G089900--Sobic007G117100 Sobic002G089900--Sobic004G013600 Sobic002G259800 Sobic002G259800 Sobic002G089900--Sobic002G259800 Sobic006G248500--Sobic001G469800 Sobic006G248500--Sobic002G259800 Sobic006G248500--Sobic003G433500 Sobic009G151200 Sobic009G151200 Sobic006G248500--Sobic009G151200 Sobic008G058800 Sobic008G058800 Sobic006G248500--Sobic008G058800 Sobic006G248500--Sobic004G013600 Sobic007G026000 Sobic007G026000 Sobic006G248500--Sobic007G026000 Sobic006G248500--Sobic004G347100 Sobic006G248500--Sobic009G044900 Sobic009G195200 Sobic009G195200 Sobic003G433500--Sobic009G195200 Sobic003G355000 Sobic003G355000 Sobic003G433500--Sobic003G355000 Sobic002G045400 Sobic002G045400 Sobic003G433500--Sobic002G045400 Sobic009G216000 Sobic009G216000 Sobic003G433500--Sobic009G216000 Sobic003G354100 Sobic003G354100 Sobic003G433500--Sobic003G354100 Sobic006G267300 Sobic006G267300 Sobic003G433500--Sobic006G267300 Sobic003G433500--Sobic006G248500 Sobic003G433500--Sobic002G362300 Sobic003G433500--Sobic002G259800 Sobic002G177400--Sobic004G088400 Sobic002G177400--Sobic009G030300 Sobic002G177400--Sobic008G117200 Sobic007G008800 Sobic007G008800 Sobic002G177400--Sobic007G008800 Sobic002G177400--Sobic008G129700 Sobic007G116400 Sobic007G116400 Sobic002G177400--Sobic007G116400 Sobic003G346000 Sobic003G346000 Sobic002G177400--Sobic003G346000 Sobic002G177400--Sobic004G061900 Sobic008G068800 Sobic008G068800 Sobic002G177400--Sobic008G068800 Sobic007G139400 Sobic007G139400 Sobic004G347100--Sobic007G139400 Sobic004G347100--Sobic006G248500 Sobic006G091000 Sobic006G091000 Sobic004G347100--Sobic006G091000 Sobic004G347100--Sobic009G044900 Sobic005G040900 Sobic005G040900 Sobic004G347100--Sobic005G040900 Sobic009G129600 Sobic009G129600 Sobic004G347100--Sobic009G129600 Sobic004G347100--Sobic009G151200 Sobic009G040800 Sobic009G040800 Sobic004G347100--Sobic009G040800 Sobic003G336800 Sobic003G336800 Sobic004G347100--Sobic003G336800 Sobic010G202600 Sobic010G202600 Sobic001G469800--Sobic010G202600 Sobic001G469800--Sobic006G248500 Sobic001G469800--Sobic002G259800 Sobic001G395100 Sobic001G395100 Sobic001G469800--Sobic001G395100 Sobic001G469800--Sobic003G433500 Sobic001G469800--Sobic008G129700 Sobic007G111100 Sobic007G111100 Sobic001G469800--Sobic007G111100 Sobic001G469800--Sobic006G267300 Sobic008G127400 Sobic008G127400 Sobic001G469800--Sobic008G127400 Sobic005G009200 Sobic005G009200 Sobic002G362300--Sobic005G009200 Sobic001G371000 Sobic001G371000 Sobic002G362300--Sobic001G371000 Sobic002G362300--Sobic003G433500 Sobic005G229000 Sobic005G229000 Sobic002G362300--Sobic005G229000 Sobic008G073000 Sobic008G073000 Sobic002G362300--Sobic008G073000 Sobic002G362300--Sobic009G030300 Sobic002G362300--Sobic002G095700 Sobic005G030300 Sobic005G030300 Sobic002G362300--Sobic005G030300 Sobic002G362300--Sobic009G044900 Sobic001G056200 Sobic001G056200 Sobic004G013600--Sobic001G056200 Sobic001G028400 Sobic001G028400 Sobic004G013600--Sobic001G028400 Sobic004G013600--Sobic003G354100 Sobic010G211300 Sobic010G211300 Sobic004G013600--Sobic010G211300 Sobic004G013600--Sobic006G248500 Sobic007G205000 Sobic007G205000 Sobic004G013600--Sobic007G205000 Sobic004G013600--Sobic009G030300 Sobic003G437500 Sobic003G437500 Sobic004G013600--Sobic003G437500 Sobic007G118200 Sobic007G118200 Sobic004G013600--Sobic007G118200
Octagon: transcription factors


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