Gene annotation
Transcriptome id Sobic.002G089900.1
Synonym Sb02g007440
Functional annotation OsFBX237 - F-box domain containing protein, expressed
UniProt C5X212
Pfam PF08268 PF00646
Panther DB PTHR32133 PTHR32133:SF142
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT5G49610 : F-box family protein
RAP-DB (Rice) LOC_Os07g35050.1 : OsFBX237 - F-box domain containing protein, expressed
MaizeGDB (Corn) Zm00025a016062 , Zm00025a015925
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G078100 zinc finger C-x8-C-x5-C-x3-H type family protein, expressed -
2 Sobic.009G044900 serine/threonine-protein phosphatase 2A regulatory subunit B subunitgamma, putative, expressed K11583: serine/threonine-protein phosphatase 2A regulatory subunit B''
3 Sobic.003G433500 Putative splicing factor(PubMedID : 24356560)@serine/arginine repetitive matrix protein 1, putative, expressed K14325: RNA-binding protein with serine-rich domain 1
4 Sobic.006G248500 expressed protein -
5 Sobic.003G132700 OsFBX237 - F-box domain containing protein, expressed -
6 Sobic.002G095700 C2-BTB1 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with C2 subfamily conserved sequence, expressed K10523: speckle-type POZ protein
7 Sobic.007G117100 tentative name(PubMedID : 31536532)@histone-like transcription factor and archaeal histone, putative, expressed -
8 Sobic.004G013600 autophagy protein 5, putative, expressed K08339: autophagy-related protein 5
9 Sobic.002G259800 hydroxyproline-rich glycoprotein family protein, putative, expressed -
10 Sobic.002G334600 OsFBX251 - F-box domain containing protein, expressed -
11 Sobic.003G354100 expressed protein -
12 Sobic.001G428000 uncharacterized TPR repeat-containing protein, putative, expressed -
13 Sobic.006G278200 RNA-binding region RNP-1, putative, expressed -
14 Sobic.002G058300 ES43 protein, putative, expressed -
15 Sobic.002G061400 OsFBX237 - F-box domain containing protein, expressed -
16 Sobic.004G246700 zinc finger family protein, putative, expressed -
17 Sobic.006G210200 zinc finger domain, LSD1 subclass family protein, expressed -
18 Sobic.007G046900 MBTB32 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed K10523: speckle-type POZ protein
19 Sobic.001G309100 zinc knuckle domain containing protein, expressed K09250: cellular nucleic acid-binding protein
20 Sobic.004G085300 Sel1 repeat domain containing protein, putative, expressed -


Gene co-expression network
sample Sobic002G089900 Sobic002G089900 Sobic004G078100 Sobic004G078100 Sobic002G089900--Sobic004G078100 Sobic009G044900 Sobic009G044900 Sobic002G089900--Sobic009G044900 Sobic003G433500 Sobic003G433500 Sobic002G089900--Sobic003G433500 Sobic006G248500 Sobic006G248500 Sobic002G089900--Sobic006G248500 Sobic003G132700 Sobic003G132700 Sobic002G089900--Sobic003G132700 Sobic002G095700 Sobic002G095700 Sobic002G089900--Sobic002G095700 Sobic007G117100 Sobic007G117100 Sobic002G089900--Sobic007G117100 Sobic004G013600 Sobic004G013600 Sobic002G089900--Sobic004G013600 Sobic002G259800 Sobic002G259800 Sobic002G089900--Sobic002G259800 Sobic004G078100--Sobic002G089900 Sobic004G078100--Sobic003G433500 Sobic007G046900 Sobic007G046900 Sobic004G078100--Sobic007G046900 Sobic004G078100--Sobic002G095700 Sobic002G151600 Sobic002G151600 Sobic004G078100--Sobic002G151600 Sobic003G173950 Sobic003G173950 Sobic004G078100--Sobic003G173950 Sobic003G197800 Sobic003G197800 Sobic004G078100--Sobic003G197800 Sobic002G058300 Sobic002G058300 Sobic004G078100--Sobic002G058300 Sobic005G021500 Sobic005G021500 Sobic004G078100--Sobic005G021500 Sobic009G030300 Sobic009G030300 Sobic009G044900--Sobic009G030300 Sobic009G044900--Sobic002G089900 Sobic009G044900--Sobic006G248500 Sobic009G044900--Sobic003G433500 Sobic002G177400 Sobic002G177400 Sobic009G044900--Sobic002G177400 Sobic004G347100 Sobic004G347100 Sobic009G044900--Sobic004G347100 Sobic001G469800 Sobic001G469800 Sobic009G044900--Sobic001G469800 Sobic002G362300 Sobic002G362300 Sobic009G044900--Sobic002G362300 Sobic009G044900--Sobic004G013600 Sobic009G195200 Sobic009G195200 Sobic003G433500--Sobic009G195200 Sobic003G355000 Sobic003G355000 Sobic003G433500--Sobic003G355000 Sobic002G045400 Sobic002G045400 Sobic003G433500--Sobic002G045400 Sobic009G216000 Sobic009G216000 Sobic003G433500--Sobic009G216000 Sobic003G354100 Sobic003G354100 Sobic003G433500--Sobic003G354100 Sobic006G267300 Sobic006G267300 Sobic003G433500--Sobic006G267300 Sobic003G433500--Sobic006G248500 Sobic003G433500--Sobic002G362300 Sobic003G433500--Sobic002G259800 Sobic006G248500--Sobic001G469800 Sobic006G248500--Sobic002G259800 Sobic006G248500--Sobic003G433500 Sobic009G151200 Sobic009G151200 Sobic006G248500--Sobic009G151200 Sobic008G058800 Sobic008G058800 Sobic006G248500--Sobic008G058800 Sobic006G248500--Sobic004G013600 Sobic007G026000 Sobic007G026000 Sobic006G248500--Sobic007G026000 Sobic006G248500--Sobic004G347100 Sobic006G248500--Sobic009G044900 Sobic009G192500 Sobic009G192500 Sobic003G132700--Sobic009G192500 Sobic003G132700--Sobic003G354100 Sobic003G132700--Sobic007G117100 Sobic003G132700--Sobic002G089900 Sobic002G014700 Sobic002G014700 Sobic003G132700--Sobic002G014700 Sobic002G223300 Sobic002G223300 Sobic003G132700--Sobic002G223300 Sobic002G334600 Sobic002G334600 Sobic003G132700--Sobic002G334600 Sobic003G132700--Sobic003G433500 Sobic001G507400 Sobic001G507400 Sobic003G132700--Sobic001G507400 Sobic006G278200 Sobic006G278200 Sobic002G095700--Sobic006G278200 Sobic008G073000 Sobic008G073000 Sobic002G095700--Sobic008G073000 Sobic005G030300 Sobic005G030300 Sobic002G095700--Sobic005G030300 Sobic008G165100 Sobic008G165100 Sobic002G095700--Sobic008G165100 Sobic002G067800 Sobic002G067800 Sobic002G095700--Sobic002G067800 Sobic002G095700--Sobic003G433500 Sobic002G095700--Sobic002G089900 Sobic009G022100 Sobic009G022100 Sobic002G095700--Sobic009G022100 Sobic002G095700--Sobic004G078100 Sobic001G038100 Sobic001G038100 Sobic007G117100--Sobic001G038100 Sobic007G117100--Sobic003G433500 Sobic007G117100--Sobic003G132700 Sobic006G120800 Sobic006G120800 Sobic007G117100--Sobic006G120800 Sobic007G117100--Sobic001G507400 Sobic001G309100 Sobic001G309100 Sobic007G117100--Sobic001G309100 Sobic007G117100--Sobic003G354100 Sobic007G117100--Sobic002G014700 Sobic007G117100--Sobic002G089900 Sobic001G056200 Sobic001G056200 Sobic004G013600--Sobic001G056200 Sobic001G028400 Sobic001G028400 Sobic004G013600--Sobic001G028400 Sobic004G013600--Sobic003G354100 Sobic010G211300 Sobic010G211300 Sobic004G013600--Sobic010G211300 Sobic004G013600--Sobic006G248500 Sobic007G205000 Sobic007G205000 Sobic004G013600--Sobic007G205000 Sobic004G013600--Sobic009G030300 Sobic003G437500 Sobic003G437500 Sobic004G013600--Sobic003G437500 Sobic007G118200 Sobic007G118200 Sobic004G013600--Sobic007G118200 Sobic002G259800--Sobic009G195200 Sobic001G306900 Sobic001G306900 Sobic002G259800--Sobic001G306900 Sobic005G015900 Sobic005G015900 Sobic002G259800--Sobic005G015900 Sobic003G394300 Sobic003G394300 Sobic002G259800--Sobic003G394300 Sobic002G259800--Sobic006G248500 Sobic001G246500 Sobic001G246500 Sobic002G259800--Sobic001G246500 Sobic005G084100 Sobic005G084100 Sobic002G259800--Sobic005G084100 Sobic002G423200 Sobic002G423200 Sobic002G259800--Sobic002G423200 Sobic004G156500 Sobic004G156500 Sobic002G259800--Sobic004G156500
Octagon: transcription factors


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