Gene annotation
Transcriptome id Sobic.007G046900.6,Sobic.007G046900.11,Sobic.007G046900.8,Sobic.007G046900.5,Sobic.007G046900.7,Sobic.007G046900.10,Sobic.007G046900.12,Sobic.007G046900.9,Sobic.007G046900.1
Synonym BPM1, Sb07g003845, ATBPM1
Functional annotation MBTB32 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed
UniProt A0A1B6PFL4 , A0A1B6PFL1 , A0A1Z5R8Z5 , A0A1Z5R824
Pfam PF00917 PF00651 PF00651
Panther DB PTHR24413 PTHR24413:SF136
NCBI CDD KOG1987; Speckle-type POZ protein SPOP and related proteins with TRAF, MATH and BTB/POZ domains
KEGG Orthology K10523; speckle-type POZ protein
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT5G19000 : BTB-POZ and MATH domain 1
RAP-DB (Rice) LOC_Os08g41150.1,LOC_Os08g41190.1 : MBTB32 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed,MBTB30 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.007G046900


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G078100 zinc finger C-x8-C-x5-C-x3-H type family protein, expressed -
2 Sobic.002G060450 - -
3 Sobic.002G223300 nucleoporin p58/p45, putative, expressed K14307: NUPL1, nucleoporin p58/p45
4 Sobic.002G018600 OsFBX234 - F-box domain containing protein, expressed -
5 Sobic.001G215400 OsFBX387 - F-box domain containing protein, expressed -
6 Sobic.002G095700 C2-BTB1 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with C2 subfamily conserved sequence, expressed K10523: speckle-type POZ protein
7 Sobic.009G239301 - -
8 Sobic.002G089900 OsFBX237 - F-box domain containing protein, expressed -
9 Sobic.003G433500 Putative splicing factor(PubMedID : 24356560)@serine/arginine repetitive matrix protein 1, putative, expressed K14325: RNA-binding protein with serine-rich domain 1
10 Sobic.002G061400 OsFBX237 - F-box domain containing protein, expressed -
11 Sobic.006G210200 zinc finger domain, LSD1 subclass family protein, expressed -
12 Sobic.004G229100 OsFBX61 - F-box domain containing protein, expressed -
13 Sobic.009G022100 Putative splicing factor(PubMedID : 24356560)@splicing factor, arginine/serine-rich 7, putative, expressed K12896: splicing factor, arginine/serine-rich 7
14 Sobic.004G086200 peptidyl-prolyl cis-trans isomerase, putative, expressed K09566: peptidyl-prolyl isomerase G (cyclophilin G)
15 Sobic.009G151200 expressed protein -
16 Sobic.009G192500 OsFBX169 - F-box domain containing protein, expressed -
17 Sobic.002G421700 OsFBX368 - F-box domain containing protein, expressed -
18 Sobic.006G022500 OsFBD9 - F-box and FBD domain containing protein, expressed -
19 Sobic.001G454301 - -
20 Sobic.003G132700 OsFBX237 - F-box domain containing protein, expressed -


Gene co-expression network
sample Sobic007G046900 Sobic007G046900 Sobic004G078100 Sobic004G078100 Sobic007G046900--Sobic004G078100 Sobic002G060450 Sobic002G060450 Sobic007G046900--Sobic002G060450 Sobic002G223300 Sobic002G223300 Sobic007G046900--Sobic002G223300 Sobic002G018600 Sobic002G018600 Sobic007G046900--Sobic002G018600 Sobic001G215400 Sobic001G215400 Sobic007G046900--Sobic001G215400 Sobic002G095700 Sobic002G095700 Sobic007G046900--Sobic002G095700 Sobic009G239301 Sobic009G239301 Sobic007G046900--Sobic009G239301 Sobic002G089900 Sobic002G089900 Sobic007G046900--Sobic002G089900 Sobic003G433500 Sobic003G433500 Sobic007G046900--Sobic003G433500 Sobic004G078100--Sobic002G089900 Sobic004G078100--Sobic003G433500 Sobic004G078100--Sobic007G046900 Sobic004G078100--Sobic002G095700 Sobic002G151600 Sobic002G151600 Sobic004G078100--Sobic002G151600 Sobic003G173950 Sobic003G173950 Sobic004G078100--Sobic003G173950 Sobic003G197800 Sobic003G197800 Sobic004G078100--Sobic003G197800 Sobic002G058300 Sobic002G058300 Sobic004G078100--Sobic002G058300 Sobic005G021500 Sobic005G021500 Sobic004G078100--Sobic005G021500 Sobic003G185250 Sobic003G185250 Sobic002G060450--Sobic003G185250 Sobic002G049000 Sobic002G049000 Sobic002G060450--Sobic002G049000 Sobic002G060450--Sobic007G046900 Sobic006G210200 Sobic006G210200 Sobic002G060450--Sobic006G210200 Sobic006G006500 Sobic006G006500 Sobic002G060450--Sobic006G006500 Sobic001G045700 Sobic001G045700 Sobic002G060450--Sobic001G045700 Sobic002G050500 Sobic002G050500 Sobic002G060450--Sobic002G050500 Sobic006G022500 Sobic006G022500 Sobic002G060450--Sobic006G022500 Sobic003G346000 Sobic003G346000 Sobic002G060450--Sobic003G346000 Sobic002G334600 Sobic002G334600 Sobic002G223300--Sobic002G334600 Sobic004G085300 Sobic004G085300 Sobic002G223300--Sobic004G085300 Sobic009G151200 Sobic009G151200 Sobic002G223300--Sobic009G151200 Sobic003G132700 Sobic003G132700 Sobic002G223300--Sobic003G132700 Sobic002G223300--Sobic007G046900 Sobic004G285000 Sobic004G285000 Sobic002G223300--Sobic004G285000 Sobic002G223300--Sobic006G210200 Sobic002G223300--Sobic002G050500 Sobic002G339800 Sobic002G339800 Sobic002G223300--Sobic002G339800 Sobic002G018600--Sobic003G433500 Sobic002G018600--Sobic002G151600 Sobic008G034600 Sobic008G034600 Sobic002G018600--Sobic008G034600 Sobic002G313300 Sobic002G313300 Sobic002G018600--Sobic002G313300 Sobic006G013500 Sobic006G013500 Sobic002G018600--Sobic006G013500 Sobic002G421700 Sobic002G421700 Sobic002G018600--Sobic002G421700 Sobic006G080300 Sobic006G080300 Sobic002G018600--Sobic006G080300 Sobic002G018600--Sobic007G046900 Sobic010G194700 Sobic010G194700 Sobic002G018600--Sobic010G194700 Sobic003G289400 Sobic003G289400 Sobic001G215400--Sobic003G289400 Sobic001G215400--Sobic009G151200 Sobic010G235600 Sobic010G235600 Sobic001G215400--Sobic010G235600 Sobic008G058800 Sobic008G058800 Sobic001G215400--Sobic008G058800 Sobic001G246500 Sobic001G246500 Sobic001G215400--Sobic001G246500 Sobic009G137100 Sobic009G137100 Sobic001G215400--Sobic009G137100 Sobic008G127400 Sobic008G127400 Sobic001G215400--Sobic008G127400 Sobic007G026000 Sobic007G026000 Sobic001G215400--Sobic007G026000 Sobic009G195200 Sobic009G195200 Sobic001G215400--Sobic009G195200 Sobic006G278200 Sobic006G278200 Sobic002G095700--Sobic006G278200 Sobic008G073000 Sobic008G073000 Sobic002G095700--Sobic008G073000 Sobic005G030300 Sobic005G030300 Sobic002G095700--Sobic005G030300 Sobic008G165100 Sobic008G165100 Sobic002G095700--Sobic008G165100 Sobic002G067800 Sobic002G067800 Sobic002G095700--Sobic002G067800 Sobic002G095700--Sobic003G433500 Sobic002G095700--Sobic002G089900 Sobic009G022100 Sobic009G022100 Sobic002G095700--Sobic009G022100 Sobic002G095700--Sobic004G078100 Sobic009G239351 Sobic009G239351 Sobic009G239301--Sobic009G239351 Sobic001G454301 Sobic001G454301 Sobic009G239301--Sobic001G454301 Sobic010G153466 Sobic010G153466 Sobic009G239301--Sobic010G153466 Sobic009G239301--Sobic007G046900 Sobic006G252000 Sobic006G252000 Sobic009G239301--Sobic006G252000 Sobic009G239301--Sobic006G210200 Sobic007G116400 Sobic007G116400 Sobic009G239301--Sobic007G116400 Sobic006G217200 Sobic006G217200 Sobic009G239301--Sobic006G217200 Sobic009G239301--Sobic006G013500 Sobic002G089900--Sobic004G078100 Sobic009G044900 Sobic009G044900 Sobic002G089900--Sobic009G044900 Sobic002G089900--Sobic003G433500 Sobic006G248500 Sobic006G248500 Sobic002G089900--Sobic006G248500 Sobic002G089900--Sobic003G132700 Sobic002G089900--Sobic002G095700 Sobic007G117100 Sobic007G117100 Sobic002G089900--Sobic007G117100 Sobic004G013600 Sobic004G013600 Sobic002G089900--Sobic004G013600 Sobic002G259800 Sobic002G259800 Sobic002G089900--Sobic002G259800 Sobic003G433500--Sobic009G195200 Sobic003G355000 Sobic003G355000 Sobic003G433500--Sobic003G355000 Sobic002G045400 Sobic002G045400 Sobic003G433500--Sobic002G045400 Sobic009G216000 Sobic009G216000 Sobic003G433500--Sobic009G216000 Sobic003G354100 Sobic003G354100 Sobic003G433500--Sobic003G354100 Sobic006G267300 Sobic006G267300 Sobic003G433500--Sobic006G267300 Sobic003G433500--Sobic006G248500 Sobic002G362300 Sobic002G362300 Sobic003G433500--Sobic002G362300 Sobic003G433500--Sobic002G259800
Octagon: transcription factors


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