Gene annotation
Transcriptome id Sobic.002G018600.1,Sobic.002G018600.2
Synonym Sb02g001750
Functional annotation OsFBX234 - F-box domain containing protein, expressed
UniProt A0A1B6Q8R4 , A0A1W0W1U5
Pfam -
Panther DB PTHR32133 PTHR32133:SF131 PTHR32133:SF131 PTHR32133
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G16210 : F-box family protein
RAP-DB (Rice) LOC_Os07g23900.1 : OsFBX234 - F-box domain containing protein, expressed
MaizeGDB (Corn) Zm00025a004212
Brachypodium -
Barley -
Wheat TraesCS3D02G455100 , TraesCS3A02G461700 , TraesCS3D02G457100 , TraesCS3B02G504300
Populus -


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cDNA sequences
Sobic.002G018600


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G433500 Putative splicing factor(PubMedID : 24356560)@serine/arginine repetitive matrix protein 1, putative, expressed K14325: RNA-binding protein with serine-rich domain 1
2 Sobic.002G151600 R-interacting factor 1, putative, expressed -
3 Sobic.008G034600 protein kinase PKN/PRK1, effector, putative, expressed -
4 Sobic.002G313300 bromodomain domain containing protein, expressed -
5 Sobic.006G013500 hydrolase/ zinc ion binding protein, putative, expressed K15442: TAD3, tRNA-specific adenosine deaminase 3
6 Sobic.002G421700 OsFBX368 - F-box domain containing protein, expressed -
7 Sobic.006G080300 SET domain containing protein, expressed -
8 Sobic.007G046900 MBTB32 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed K10523: speckle-type POZ protein
9 Sobic.010G194700 ARID/BRIGHT DNA-binding domain-containing protein, putative, expressed -
10 Sobic.002G061400 OsFBX237 - F-box domain containing protein, expressed -
11 Sobic.005G009200 expressed protein -
12 Sobic.005G015900 dnaJ domain containing protein, expressed -
13 Sobic.008G129700 PAPA-1-like conserved region family protein, expressed K11666: INO80B, ZNHIT4, INO80 complex subunit B
14 Sobic.004G031700 expressed protein -
15 Sobic.008G165100 G-patch domain containing protein, putative, expressed K13103: tuftelin-interacting protein 11
16 Sobic.001G206100 expressed protein -
17 Sobic.002G045400 MBTB13 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed K10523: speckle-type POZ protein
18 Sobic.002G297800 growth regulating factor protein, putative, expressed -
19 Sobic.009G000500 pex14, putative, expressed K13343: peroxin-14
20 Sobic.006G123900 chloroplastic group IIA intron splicing facilitator CRS1, chloroplast precursor, putative, expressed -


Gene co-expression network
sample Sobic002G018600 Sobic002G018600 Sobic003G433500 Sobic003G433500 Sobic002G018600--Sobic003G433500 Sobic002G151600 Sobic002G151600 Sobic002G018600--Sobic002G151600 Sobic008G034600 Sobic008G034600 Sobic002G018600--Sobic008G034600 Sobic002G313300 Sobic002G313300 Sobic002G018600--Sobic002G313300 Sobic006G013500 Sobic006G013500 Sobic002G018600--Sobic006G013500 Sobic002G421700 Sobic002G421700 Sobic002G018600--Sobic002G421700 Sobic006G080300 Sobic006G080300 Sobic002G018600--Sobic006G080300 Sobic007G046900 Sobic007G046900 Sobic002G018600--Sobic007G046900 Sobic010G194700 Sobic010G194700 Sobic002G018600--Sobic010G194700 Sobic009G195200 Sobic009G195200 Sobic003G433500--Sobic009G195200 Sobic003G355000 Sobic003G355000 Sobic003G433500--Sobic003G355000 Sobic002G045400 Sobic002G045400 Sobic003G433500--Sobic002G045400 Sobic009G216000 Sobic009G216000 Sobic003G433500--Sobic009G216000 Sobic003G354100 Sobic003G354100 Sobic003G433500--Sobic003G354100 Sobic006G267300 Sobic006G267300 Sobic003G433500--Sobic006G267300 Sobic006G248500 Sobic006G248500 Sobic003G433500--Sobic006G248500 Sobic002G362300 Sobic002G362300 Sobic003G433500--Sobic002G362300 Sobic002G259800 Sobic002G259800 Sobic003G433500--Sobic002G259800 Sobic002G157000 Sobic002G157000 Sobic002G151600--Sobic002G157000 Sobic003G197800 Sobic003G197800 Sobic002G151600--Sobic003G197800 Sobic002G320500 Sobic002G320500 Sobic002G151600--Sobic002G320500 Sobic002G151600--Sobic002G313300 Sobic009G000500 Sobic009G000500 Sobic002G151600--Sobic009G000500 Sobic001G094000 Sobic001G094000 Sobic002G151600--Sobic001G094000 Sobic009G065100 Sobic009G065100 Sobic002G151600--Sobic009G065100 Sobic002G248400 Sobic002G248400 Sobic002G151600--Sobic002G248400 Sobic001G303675 Sobic001G303675 Sobic002G151600--Sobic001G303675 Sobic007G205800 Sobic007G205800 Sobic008G034600--Sobic007G205800 Sobic007G011400 Sobic007G011400 Sobic008G034600--Sobic007G011400 Sobic010G263800 Sobic010G263800 Sobic008G034600--Sobic010G263800 Sobic004G271900 Sobic004G271900 Sobic008G034600--Sobic004G271900 Sobic008G117200 Sobic008G117200 Sobic008G034600--Sobic008G117200 Sobic008G034600--Sobic002G421700 Sobic009G022200 Sobic009G022200 Sobic008G034600--Sobic009G022200 Sobic007G224900 Sobic007G224900 Sobic008G034600--Sobic007G224900 Sobic003G346000 Sobic003G346000 Sobic008G034600--Sobic003G346000 Sobic001G477800 Sobic001G477800 Sobic002G313300--Sobic001G477800 Sobic002G077200 Sobic002G077200 Sobic002G313300--Sobic002G077200 Sobic002G313300--Sobic007G011400 Sobic002G313300--Sobic010G263800 Sobic001G543900 Sobic001G543900 Sobic002G313300--Sobic001G543900 Sobic002G313300--Sobic006G080300 Sobic006G009400 Sobic006G009400 Sobic002G313300--Sobic006G009400 Sobic007G185900 Sobic007G185900 Sobic002G313300--Sobic007G185900 Sobic004G031700 Sobic004G031700 Sobic002G313300--Sobic004G031700 Sobic001G206100 Sobic001G206100 Sobic006G013500--Sobic001G206100 Sobic001G257300 Sobic001G257300 Sobic006G013500--Sobic001G257300 Sobic001G306900 Sobic001G306900 Sobic006G013500--Sobic001G306900 Sobic006G013500--Sobic006G080300 Sobic006G013500--Sobic004G031700 Sobic006G013500--Sobic009G000500 Sobic006G013500--Sobic003G197800 Sobic006G013500--Sobic001G094000 Sobic006G046700 Sobic006G046700 Sobic006G013500--Sobic006G046700 Sobic002G421700--Sobic008G034600 Sobic002G421700--Sobic008G117200 Sobic001G454301 Sobic001G454301 Sobic002G421700--Sobic001G454301 Sobic002G061400 Sobic002G061400 Sobic002G421700--Sobic002G061400 Sobic005G015900 Sobic005G015900 Sobic002G421700--Sobic005G015900 Sobic008G129700 Sobic008G129700 Sobic002G421700--Sobic008G129700 Sobic007G116400 Sobic007G116400 Sobic002G421700--Sobic007G116400 Sobic002G421700--Sobic001G094000 Sobic006G217200 Sobic006G217200 Sobic002G421700--Sobic006G217200 Sobic003G268300 Sobic003G268300 Sobic006G080300--Sobic003G268300 Sobic006G080300--Sobic004G031700 Sobic006G080300--Sobic001G094000 Sobic006G080300--Sobic001G477800 Sobic006G080300--Sobic002G313300 Sobic006G080300--Sobic001G206100 Sobic006G080300--Sobic002G157000 Sobic003G170100 Sobic003G170100 Sobic006G080300--Sobic003G170100 Sobic006G080300--Sobic001G257300 Sobic004G078100 Sobic004G078100 Sobic007G046900--Sobic004G078100 Sobic002G060450 Sobic002G060450 Sobic007G046900--Sobic002G060450 Sobic002G223300 Sobic002G223300 Sobic007G046900--Sobic002G223300 Sobic007G046900--Sobic002G018600 Sobic001G215400 Sobic001G215400 Sobic007G046900--Sobic001G215400 Sobic002G095700 Sobic002G095700 Sobic007G046900--Sobic002G095700 Sobic009G239301 Sobic009G239301 Sobic007G046900--Sobic009G239301 Sobic002G089900 Sobic002G089900 Sobic007G046900--Sobic002G089900 Sobic007G046900--Sobic003G433500 Sobic002G067800 Sobic002G067800 Sobic010G194700--Sobic002G067800 Sobic010G194700--Sobic001G206100 Sobic008G165100 Sobic008G165100 Sobic010G194700--Sobic008G165100 Sobic010G194700--Sobic002G151600 Sobic004G213000 Sobic004G213000 Sobic010G194700--Sobic004G213000 Sobic005G059100 Sobic005G059100 Sobic010G194700--Sobic005G059100 Sobic010G194700--Sobic006G013500 Sobic005G079800 Sobic005G079800 Sobic010G194700--Sobic005G079800 Sobic010G194700--Sobic003G197800
Octagon: transcription factors


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