Gene annotation
Transcriptome id Sobic.010G194700.1
Synonym Sb10g024400
Functional annotation ARID/BRIGHT DNA-binding domain-containing protein, putative, expressed
UniProt A0A194YKA3
Pfam PF00011 PF01388
Panther DB PTHR15348 PTHR15348:SF4
NCBI CDD KOG2744; DNA-binding proteins Bright/BRCAA1/RBP1 and related proteins containing BRIGHT domain
KEGG Orthology -
Gene Ontology GO:0003677; DNA binding


Orthologs (automatic annotation)
TAIR AT2G17410 : ARID/BRIGHT DNA-binding domain-containing protein
RAP-DB (Rice) LOC_Os06g41730.2 : ARID/BRIGHT DNA-binding domain-containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a051519 , Zm00025a046802 , Zm00025a042112 , Zm00025a040415 , Zm00025a058129 , Zm00025a058125
Brachypodium KQK20602
Barley HORVU2Hr1G058170.8 , HORVU2Hr1G058170.5 , HORVU2Hr1G058170.4 , HORVU2Hr1G058170.7 , HORVU2Hr1G058170.6 , HORVU2Hr1G058170.1 , HORVU2Hr1G058170.3 , HORVU2Hr1G058170.2
Wheat TraesCS2D02G245500 , TraesCS2D02G245500 , TraesCS2D02G245500 , TraesCS2A02G240000 , TraesCS2B02G260300 , TraesCS2B02G260300
Populus -


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cDNA sequences
Sobic.010G194700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G067800 - -
2 Sobic.001G206100 expressed protein -
3 Sobic.008G165100 G-patch domain containing protein, putative, expressed K13103: tuftelin-interacting protein 11
4 Sobic.002G151600 R-interacting factor 1, putative, expressed -
5 Sobic.004G213000 AT hook motif family protein, expressed -
6 Sobic.005G059100 bromodomain domain containing protein, expressed -
7 Sobic.006G013500 hydrolase/ zinc ion binding protein, putative, expressed K15442: TAD3, tRNA-specific adenosine deaminase 3
8 Sobic.005G079800 transcriptional corepressor SEUSS, putative, expressed -
9 Sobic.003G197800 peptidyl-prolyl cis-trans isomerase, putative, expressed K12737: peptidyl-prolyl cis-trans isomerase SDCCAG10
10 Sobic.006G123900 chloroplastic group IIA intron splicing facilitator CRS1, chloroplast precursor, putative, expressed -
11 Sobic.001G257300 OsFBL52 - F-box domain and LRR containing protein, expressed -
12 Sobic.007G043500 DNA topoisomerase 1, putative, expressed K03163: DNA topoisomerase I
13 Sobic.003G433500 Putative splicing factor(PubMedID : 24356560)@serine/arginine repetitive matrix protein 1, putative, expressed K14325: RNA-binding protein with serine-rich domain 1
14 Sobic.008G100100 MYB family transcription factor, putative, expressed K12860: CDC5L, CDC5, pre-mRNA-splicing factor CDC5/CEF1
15 Sobic.002G018600 OsFBX234 - F-box domain containing protein, expressed -
16 Sobic.002G095700 C2-BTB1 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with C2 subfamily conserved sequence, expressed K10523: speckle-type POZ protein
17 Sobic.004G078100 zinc finger C-x8-C-x5-C-x3-H type family protein, expressed -
18 Sobic.002G320500 MYB family transcription factor, putative, expressed -
19 Sobic.008G073000 expressed protein -
20 Sobic.008G101800 expressed protein -


Gene co-expression network
sample Sobic010G194700 Sobic010G194700 Sobic002G067800 Sobic002G067800 Sobic010G194700--Sobic002G067800 Sobic001G206100 Sobic001G206100 Sobic010G194700--Sobic001G206100 Sobic008G165100 Sobic008G165100 Sobic010G194700--Sobic008G165100 Sobic002G151600 Sobic002G151600 Sobic010G194700--Sobic002G151600 Sobic004G213000 Sobic004G213000 Sobic010G194700--Sobic004G213000 Sobic005G059100 Sobic005G059100 Sobic010G194700--Sobic005G059100 Sobic006G013500 Sobic006G013500 Sobic010G194700--Sobic006G013500 Sobic005G079800 Sobic005G079800 Sobic010G194700--Sobic005G079800 Sobic003G197800 Sobic003G197800 Sobic010G194700--Sobic003G197800 Sobic002G067800--Sobic010G194700 Sobic002G067800--Sobic008G165100 Sobic002G067800--Sobic005G059100 Sobic002G095700 Sobic002G095700 Sobic002G067800--Sobic002G095700 Sobic008G073000 Sobic008G073000 Sobic002G067800--Sobic008G073000 Sobic002G159200 Sobic002G159200 Sobic002G067800--Sobic002G159200 Sobic003G355000 Sobic003G355000 Sobic002G067800--Sobic003G355000 Sobic007G043500 Sobic007G043500 Sobic002G067800--Sobic007G043500 Sobic006G123900 Sobic006G123900 Sobic002G067800--Sobic006G123900 Sobic001G257300 Sobic001G257300 Sobic001G206100--Sobic001G257300 Sobic001G206100--Sobic006G013500 Sobic002G320500 Sobic002G320500 Sobic001G206100--Sobic002G320500 Sobic006G080300 Sobic006G080300 Sobic001G206100--Sobic006G080300 Sobic002G157000 Sobic002G157000 Sobic001G206100--Sobic002G157000 Sobic009G000500 Sobic009G000500 Sobic001G206100--Sobic009G000500 Sobic001G206100--Sobic004G213000 Sobic001G356500 Sobic001G356500 Sobic001G206100--Sobic001G356500 Sobic002G161000 Sobic002G161000 Sobic001G206100--Sobic002G161000 Sobic008G165100--Sobic002G067800 Sobic008G165100--Sobic010G194700 Sobic008G165100--Sobic008G073000 Sobic005G030300 Sobic005G030300 Sobic008G165100--Sobic005G030300 Sobic008G165100--Sobic002G095700 Sobic008G165100--Sobic006G123900 Sobic008G165100--Sobic002G151600 Sobic003G433500 Sobic003G433500 Sobic008G165100--Sobic003G433500 Sobic002G045400 Sobic002G045400 Sobic008G165100--Sobic002G045400 Sobic002G151600--Sobic002G157000 Sobic002G151600--Sobic003G197800 Sobic002G151600--Sobic002G320500 Sobic002G313300 Sobic002G313300 Sobic002G151600--Sobic002G313300 Sobic002G151600--Sobic009G000500 Sobic001G094000 Sobic001G094000 Sobic002G151600--Sobic001G094000 Sobic009G065100 Sobic009G065100 Sobic002G151600--Sobic009G065100 Sobic002G248400 Sobic002G248400 Sobic002G151600--Sobic002G248400 Sobic001G303675 Sobic001G303675 Sobic002G151600--Sobic001G303675 Sobic004G271000 Sobic004G271000 Sobic004G213000--Sobic004G271000 Sobic004G213000--Sobic001G206100 Sobic006G032400 Sobic006G032400 Sobic004G213000--Sobic006G032400 Sobic004G213000--Sobic006G080300 Sobic004G213000--Sobic002G248400 Sobic003G108700 Sobic003G108700 Sobic004G213000--Sobic003G108700 Sobic004G213000--Sobic002G157000 Sobic004G213000--Sobic002G151600 Sobic004G213000--Sobic001G257300 Sobic005G059100--Sobic007G043500 Sobic007G026000 Sobic007G026000 Sobic005G059100--Sobic007G026000 Sobic005G059100--Sobic006G123900 Sobic005G059100--Sobic002G067800 Sobic005G059100--Sobic010G194700 Sobic005G059100--Sobic006G080300 Sobic007G185900 Sobic007G185900 Sobic005G059100--Sobic007G185900 Sobic005G059100--Sobic001G206100 Sobic005G059100--Sobic002G159200 Sobic006G013500--Sobic001G206100 Sobic006G013500--Sobic001G257300 Sobic001G306900 Sobic001G306900 Sobic006G013500--Sobic001G306900 Sobic006G013500--Sobic006G080300 Sobic004G031700 Sobic004G031700 Sobic006G013500--Sobic004G031700 Sobic006G013500--Sobic009G000500 Sobic006G013500--Sobic003G197800 Sobic006G013500--Sobic001G094000 Sobic006G046700 Sobic006G046700 Sobic006G013500--Sobic006G046700 Sobic003G438900 Sobic003G438900 Sobic005G079800--Sobic003G438900 Sobic001G253200 Sobic001G253200 Sobic005G079800--Sobic001G253200 Sobic007G191700 Sobic007G191700 Sobic005G079800--Sobic007G191700 Sobic002G153700 Sobic002G153700 Sobic005G079800--Sobic002G153700 Sobic005G021500 Sobic005G021500 Sobic005G079800--Sobic005G021500 Sobic003G427100 Sobic003G427100 Sobic005G079800--Sobic003G427100 Sobic007G054400 Sobic007G054400 Sobic005G079800--Sobic007G054400 Sobic005G079800--Sobic010G194700 Sobic004G096500 Sobic004G096500 Sobic005G079800--Sobic004G096500 Sobic003G197800--Sobic002G157000 Sobic003G197800--Sobic002G320500 Sobic002G186000 Sobic002G186000 Sobic003G197800--Sobic002G186000 Sobic003G197800--Sobic002G151600 Sobic006G133800 Sobic006G133800 Sobic003G197800--Sobic006G133800 Sobic003G197800--Sobic009G065100 Sobic003G173950 Sobic003G173950 Sobic003G197800--Sobic003G173950 Sobic003G197800--Sobic002G248400 Sobic003G197800--Sobic001G206100
Octagon: transcription factors


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