Gene annotation
Transcriptome id Sobic.002G067800.2
Synonym ELF5, Sb02g005690
Functional annotation -
UniProt A0A1W0W2R1
Pfam PF09429
Panther DB PTHR13361 PTHR13361:SF1
NCBI CDD KOG4672; Uncharacterized conserved low complexity protein
KEGG Orthology -
Gene Ontology GO:0006396; RNA processing


Orthologs (automatic annotation)
TAIR AT5G62640 : proline-rich family protein
RAP-DB (Rice) LOC_Os07g09510.1 : retrotransposon protein, putative, unclassified, expressed
MaizeGDB (Corn) Zm00025a045299 , Zm00025a016030
Brachypodium KQK20473
Barley HORVU2Hr1G056040.3 , HORVU2Hr1G056040.2 , HORVU2Hr1G056040.1 , HORVU2Hr1G056040.4
Wheat TraesCS2B02G258200 , TraesCS2B02G258200 , TraesCS2A02G245500 , TraesCS2D02G244600
Populus -


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cDNA sequences
Sobic.002G067800


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G194700 ARID/BRIGHT DNA-binding domain-containing protein, putative, expressed -
2 Sobic.008G165100 G-patch domain containing protein, putative, expressed K13103: tuftelin-interacting protein 11
3 Sobic.005G059100 bromodomain domain containing protein, expressed -
4 Sobic.002G095700 C2-BTB1 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with C2 subfamily conserved sequence, expressed K10523: speckle-type POZ protein
5 Sobic.008G073000 expressed protein -
6 Sobic.002G159200 WD domain, G-beta repeat domain containing protein, expressed K17985: activating molecule in BECN1-regulated autophagy protein 1
7 Sobic.003G355000 Transcription initiation factor TFIID subunit A containing protein, expressed K03126: transcription initiation factor TFIID subunit 12
8 Sobic.007G043500 DNA topoisomerase 1, putative, expressed K03163: DNA topoisomerase I
9 Sobic.006G123900 chloroplastic group IIA intron splicing facilitator CRS1, chloroplast precursor, putative, expressed -
10 Sobic.003G433500 Putative splicing factor(PubMedID : 24356560)@serine/arginine repetitive matrix protein 1, putative, expressed K14325: RNA-binding protein with serine-rich domain 1
11 Sobic.001G206100 expressed protein -
12 Sobic.004G332300 zinc finger, C3HC4 type domain containing protein, expressed -
13 Sobic.005G030300 protein kinase PKN/PRK1, effector, putative, expressed -
14 Sobic.006G278200 RNA-binding region RNP-1, putative, expressed -
15 Sobic.002G341100 bromodomain domain containing protein, expressed -
16 Sobic.005G079800 transcriptional corepressor SEUSS, putative, expressed -
17 Sobic.009G000500 pex14, putative, expressed K13343: peroxin-14
18 Sobic.001G426900 coronatine-insensitive protein, putative, expressed K13463: coronatine-insensitive protein 1
19 Sobic.002G045400 MBTB13 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed K10523: speckle-type POZ protein
20 Sobic.002G018600 OsFBX234 - F-box domain containing protein, expressed -


Gene co-expression network
sample Sobic002G067800 Sobic002G067800 Sobic010G194700 Sobic010G194700 Sobic002G067800--Sobic010G194700 Sobic008G165100 Sobic008G165100 Sobic002G067800--Sobic008G165100 Sobic005G059100 Sobic005G059100 Sobic002G067800--Sobic005G059100 Sobic002G095700 Sobic002G095700 Sobic002G067800--Sobic002G095700 Sobic008G073000 Sobic008G073000 Sobic002G067800--Sobic008G073000 Sobic002G159200 Sobic002G159200 Sobic002G067800--Sobic002G159200 Sobic003G355000 Sobic003G355000 Sobic002G067800--Sobic003G355000 Sobic007G043500 Sobic007G043500 Sobic002G067800--Sobic007G043500 Sobic006G123900 Sobic006G123900 Sobic002G067800--Sobic006G123900 Sobic010G194700--Sobic002G067800 Sobic001G206100 Sobic001G206100 Sobic010G194700--Sobic001G206100 Sobic010G194700--Sobic008G165100 Sobic002G151600 Sobic002G151600 Sobic010G194700--Sobic002G151600 Sobic004G213000 Sobic004G213000 Sobic010G194700--Sobic004G213000 Sobic010G194700--Sobic005G059100 Sobic006G013500 Sobic006G013500 Sobic010G194700--Sobic006G013500 Sobic005G079800 Sobic005G079800 Sobic010G194700--Sobic005G079800 Sobic003G197800 Sobic003G197800 Sobic010G194700--Sobic003G197800 Sobic008G165100--Sobic002G067800 Sobic008G165100--Sobic010G194700 Sobic008G165100--Sobic008G073000 Sobic005G030300 Sobic005G030300 Sobic008G165100--Sobic005G030300 Sobic008G165100--Sobic002G095700 Sobic008G165100--Sobic006G123900 Sobic008G165100--Sobic002G151600 Sobic003G433500 Sobic003G433500 Sobic008G165100--Sobic003G433500 Sobic002G045400 Sobic002G045400 Sobic008G165100--Sobic002G045400 Sobic005G059100--Sobic007G043500 Sobic007G026000 Sobic007G026000 Sobic005G059100--Sobic007G026000 Sobic005G059100--Sobic006G123900 Sobic005G059100--Sobic002G067800 Sobic005G059100--Sobic010G194700 Sobic006G080300 Sobic006G080300 Sobic005G059100--Sobic006G080300 Sobic007G185900 Sobic007G185900 Sobic005G059100--Sobic007G185900 Sobic005G059100--Sobic001G206100 Sobic005G059100--Sobic002G159200 Sobic006G278200 Sobic006G278200 Sobic002G095700--Sobic006G278200 Sobic002G095700--Sobic008G073000 Sobic002G095700--Sobic005G030300 Sobic002G095700--Sobic008G165100 Sobic002G095700--Sobic002G067800 Sobic002G095700--Sobic003G433500 Sobic002G089900 Sobic002G089900 Sobic002G095700--Sobic002G089900 Sobic009G022100 Sobic009G022100 Sobic002G095700--Sobic009G022100 Sobic004G078100 Sobic004G078100 Sobic002G095700--Sobic004G078100 Sobic008G073000--Sobic005G030300 Sobic008G073000--Sobic002G045400 Sobic008G073000--Sobic002G095700 Sobic008G101800 Sobic008G101800 Sobic008G073000--Sobic008G101800 Sobic001G202266 Sobic001G202266 Sobic008G073000--Sobic001G202266 Sobic008G073000--Sobic006G278200 Sobic008G073000--Sobic008G165100 Sobic010G174800 Sobic010G174800 Sobic008G073000--Sobic010G174800 Sobic008G073000--Sobic002G067800 Sobic002G159200--Sobic007G043500 Sobic009G000500 Sobic009G000500 Sobic002G159200--Sobic009G000500 Sobic002G159200--Sobic002G067800 Sobic003G307000 Sobic003G307000 Sobic002G159200--Sobic003G307000 Sobic002G159200--Sobic005G059100 Sobic001G405300 Sobic001G405300 Sobic002G159200--Sobic001G405300 Sobic006G046700 Sobic006G046700 Sobic002G159200--Sobic006G046700 Sobic002G159200--Sobic003G355000 Sobic002G159200--Sobic007G026000 Sobic009G198100 Sobic009G198100 Sobic003G355000--Sobic009G198100 Sobic002G034600 Sobic002G034600 Sobic003G355000--Sobic002G034600 Sobic003G355000--Sobic002G045400 Sobic003G355000--Sobic003G433500 Sobic008G174300 Sobic008G174300 Sobic003G355000--Sobic008G174300 Sobic001G517500 Sobic001G517500 Sobic003G355000--Sobic001G517500 Sobic007G118200 Sobic007G118200 Sobic003G355000--Sobic007G118200 Sobic010G033400 Sobic010G033400 Sobic003G355000--Sobic010G033400 Sobic001G497900 Sobic001G497900 Sobic003G355000--Sobic001G497900 Sobic007G043500--Sobic005G059100 Sobic007G043500--Sobic002G159200 Sobic007G043500--Sobic006G123900 Sobic007G043500--Sobic002G067800 Sobic007G043500--Sobic010G194700 Sobic007G043500--Sobic001G405300 Sobic007G043500--Sobic008G073000 Sobic007G043500--Sobic006G080300 Sobic008G106000 Sobic008G106000 Sobic007G043500--Sobic008G106000 Sobic006G123900--Sobic008G106000 Sobic002G001600 Sobic002G001600 Sobic006G123900--Sobic002G001600 Sobic006G123900--Sobic005G059100 Sobic002G313300 Sobic002G313300 Sobic006G123900--Sobic002G313300 Sobic006G123900--Sobic006G013500 Sobic008G129700 Sobic008G129700 Sobic006G123900--Sobic008G129700 Sobic006G123900--Sobic006G080300 Sobic006G123900--Sobic007G185900 Sobic006G123900--Sobic002G151600
Octagon: transcription factors


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