Gene annotation
Transcriptome id Sobic.002G341100.2
Synonym Sb02g036530, BRD4
Functional annotation bromodomain domain containing protein, expressed
UniProt A0A1W0W6X9
Pfam PF00439
Panther DB PTHR37888:SF1 PTHR37888
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT1G61215 : bromodomain 4
RAP-DB (Rice) LOC_Os07g37800.1 : bromodomain domain containing protein, expressed
MaizeGDB (Corn) Zm00025a048408 , Zm00025a014925
Brachypodium KQK15719
Barley -
Wheat TraesCS2B02G229800 , TraesCS2A02G202700 , TraesCS2D02G213000
Populus -


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cDNA sequences
Sobic.002G341100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G033400 protein kinase domain containing protein, expressed -
2 Sobic.001G041400 PAPA-1-like conserved region family protein, expressed -
3 Sobic.006G278200 RNA-binding region RNP-1, putative, expressed -
4 Sobic.002G095700 C2-BTB1 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with C2 subfamily conserved sequence, expressed K10523: speckle-type POZ protein
5 Sobic.002G067800 - -
6 Sobic.003G035500 hexokinase, putative, expressed K00844: hexokinase
7 Sobic.008G073000 expressed protein -
8 Sobic.004G256200 B-box (BBX) protein(PubMedID : 30626335)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@CCT/B-box zinc finger protein, putative, expressed -
9 Sobic.006G120400 no apical meristem protein, putative, expressed -
10 Sobic.007G155900 bZIP transcription factor, putative, expressed K14432: ABA responsive element binding factor
11 Sobic.006G261100 UBX domain-containing protein, putative, expressed -
12 Sobic.010G194700 ARID/BRIGHT DNA-binding domain-containing protein, putative, expressed -
13 Sobic.005G030300 protein kinase PKN/PRK1, effector, putative, expressed -
14 Sobic.005G059100 bromodomain domain containing protein, expressed -
15 Sobic.010G189100 expressed protein -
16 Sobic.008G165100 G-patch domain containing protein, putative, expressed K13103: tuftelin-interacting protein 11
17 Sobic.009G022100 Putative splicing factor(PubMedID : 24356560)@splicing factor, arginine/serine-rich 7, putative, expressed K12896: splicing factor, arginine/serine-rich 7
18 Sobic.007G216900 coiled-coil domain containing 49, putative, expressed -
19 Sobic.006G203200 Disease resistance/zinc finger/chromosome condensation-like region protein, putative, expressed -
20 Sobic.004G332300 zinc finger, C3HC4 type domain containing protein, expressed -


Gene co-expression network
sample Sobic002G341100 Sobic002G341100 Sobic001G033400 Sobic001G033400 Sobic002G341100--Sobic001G033400 Sobic001G041400 Sobic001G041400 Sobic002G341100--Sobic001G041400 Sobic006G278200 Sobic006G278200 Sobic002G341100--Sobic006G278200 Sobic002G095700 Sobic002G095700 Sobic002G341100--Sobic002G095700 Sobic002G067800 Sobic002G067800 Sobic002G341100--Sobic002G067800 Sobic003G035500 Sobic003G035500 Sobic002G341100--Sobic003G035500 Sobic008G073000 Sobic008G073000 Sobic002G341100--Sobic008G073000 Sobic004G256200 Sobic004G256200 Sobic002G341100--Sobic004G256200 Sobic006G120400 Sobic006G120400 Sobic002G341100--Sobic006G120400 Sobic001G033400--Sobic003G035500 Sobic001G033400--Sobic002G341100 Sobic010G207400 Sobic010G207400 Sobic001G033400--Sobic010G207400 Sobic001G033400--Sobic001G041400 Sobic007G078300 Sobic007G078300 Sobic001G033400--Sobic007G078300 Sobic003G004500 Sobic003G004500 Sobic001G033400--Sobic003G004500 Sobic010G189100 Sobic010G189100 Sobic001G033400--Sobic010G189100 Sobic005G050600 Sobic005G050600 Sobic001G033400--Sobic005G050600 Sobic002G403200 Sobic002G403200 Sobic001G033400--Sobic002G403200 Sobic001G041400--Sobic007G078300 Sobic001G041400--Sobic002G341100 Sobic001G041400--Sobic001G033400 Sobic001G042800 Sobic001G042800 Sobic001G041400--Sobic001G042800 Sobic003G022200 Sobic003G022200 Sobic001G041400--Sobic003G022200 Sobic004G329800 Sobic004G329800 Sobic001G041400--Sobic004G329800 Sobic001G041400--Sobic003G035500 Sobic010G152200 Sobic010G152200 Sobic001G041400--Sobic010G152200 Sobic001G041400--Sobic002G067800 Sobic006G278200--Sobic002G095700 Sobic006G278200--Sobic008G073000 Sobic005G072400 Sobic005G072400 Sobic006G278200--Sobic005G072400 Sobic005G030300 Sobic005G030300 Sobic006G278200--Sobic005G030300 Sobic001G202266 Sobic001G202266 Sobic006G278200--Sobic001G202266 Sobic006G278200--Sobic002G341100 Sobic009G137900 Sobic009G137900 Sobic006G278200--Sobic009G137900 Sobic002G089900 Sobic002G089900 Sobic006G278200--Sobic002G089900 Sobic006G278200--Sobic002G067800 Sobic002G095700--Sobic006G278200 Sobic002G095700--Sobic008G073000 Sobic002G095700--Sobic005G030300 Sobic008G165100 Sobic008G165100 Sobic002G095700--Sobic008G165100 Sobic002G095700--Sobic002G067800 Sobic003G433500 Sobic003G433500 Sobic002G095700--Sobic003G433500 Sobic002G095700--Sobic002G089900 Sobic009G022100 Sobic009G022100 Sobic002G095700--Sobic009G022100 Sobic004G078100 Sobic004G078100 Sobic002G095700--Sobic004G078100 Sobic010G194700 Sobic010G194700 Sobic002G067800--Sobic010G194700 Sobic002G067800--Sobic008G165100 Sobic005G059100 Sobic005G059100 Sobic002G067800--Sobic005G059100 Sobic002G067800--Sobic002G095700 Sobic002G067800--Sobic008G073000 Sobic002G159200 Sobic002G159200 Sobic002G067800--Sobic002G159200 Sobic003G355000 Sobic003G355000 Sobic002G067800--Sobic003G355000 Sobic007G043500 Sobic007G043500 Sobic002G067800--Sobic007G043500 Sobic006G123900 Sobic006G123900 Sobic002G067800--Sobic006G123900 Sobic003G035500--Sobic001G033400 Sobic008G156200 Sobic008G156200 Sobic003G035500--Sobic008G156200 Sobic003G035500--Sobic007G078300 Sobic003G035500--Sobic010G189100 Sobic002G247300 Sobic002G247300 Sobic003G035500--Sobic002G247300 Sobic003G035500--Sobic010G207400 Sobic003G174200 Sobic003G174200 Sobic003G035500--Sobic003G174200 Sobic003G412200 Sobic003G412200 Sobic003G035500--Sobic003G412200 Sobic007G091200 Sobic007G091200 Sobic003G035500--Sobic007G091200 Sobic008G073000--Sobic005G030300 Sobic002G045400 Sobic002G045400 Sobic008G073000--Sobic002G045400 Sobic008G073000--Sobic002G095700 Sobic008G101800 Sobic008G101800 Sobic008G073000--Sobic008G101800 Sobic008G073000--Sobic001G202266 Sobic008G073000--Sobic006G278200 Sobic008G073000--Sobic008G165100 Sobic010G174800 Sobic010G174800 Sobic008G073000--Sobic010G174800 Sobic008G073000--Sobic002G067800 Sobic004G256200--Sobic002G341100 Sobic006G261100 Sobic006G261100 Sobic004G256200--Sobic006G261100 Sobic001G116100 Sobic001G116100 Sobic004G256200--Sobic001G116100 Sobic004G250900 Sobic004G250900 Sobic004G256200--Sobic004G250900 Sobic004G256200--Sobic006G120400 Sobic001G218200 Sobic001G218200 Sobic004G256200--Sobic001G218200 Sobic002G276900 Sobic002G276900 Sobic004G256200--Sobic002G276900 Sobic004G256200--Sobic008G073000 Sobic004G256200--Sobic002G095700 Sobic009G242800 Sobic009G242800 Sobic006G120400--Sobic009G242800 Sobic006G120400--Sobic002G341100 Sobic006G203200 Sobic006G203200 Sobic006G120400--Sobic006G203200 Sobic007G155900 Sobic007G155900 Sobic006G120400--Sobic007G155900 Sobic008G015700 Sobic008G015700 Sobic006G120400--Sobic008G015700 Sobic008G106000 Sobic008G106000 Sobic006G120400--Sobic008G106000 Sobic006G120400--Sobic007G043500 Sobic006G120400--Sobic004G256200 Sobic002G001600 Sobic002G001600 Sobic006G120400--Sobic002G001600
Octagon: transcription factors


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