Gene annotation
Transcriptome id Sobic.006G120400.1,Sobic.006G120400.3,Sobic.006G120400.2
Synonym Sb06g020103, SOG1, ANAC008
Functional annotation no apical meristem protein, putative, expressed
UniProt A0A1Z5RDL4 , A0A1Z5RDI9 , A0A1Z5REH3
Pfam PF02365
Panther DB PTHR31079 PTHR31079:SF2
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0006355; regulation of transcription, DNA-templated GO:0003677DNA binding


Orthologs (automatic annotation)
TAIR AT1G25580 : NAC (No Apical Meristem) domain transcriptional regulator superfamily protein
RAP-DB (Rice) LOC_Os02g38130.1 : no apical meristem protein, putative, expressed
MaizeGDB (Corn) Zm00025a010990 , Zm00025a056304
Brachypodium -
Barley -
Wheat -
Populus PNS94775


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G242800 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./late senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@protein kinase domain containing protein, expressed -
2 Sobic.002G341100 bromodomain domain containing protein, expressed -
3 Sobic.006G203200 Disease resistance/zinc finger/chromosome condensation-like region protein, putative, expressed -
4 Sobic.007G155900 bZIP transcription factor, putative, expressed K14432: ABA responsive element binding factor
5 Sobic.008G015700 major facilitator superfamily antiporter, putative, expressed -
6 Sobic.008G106000 eukaryotic translation initiation factor 5B, putative, expressed K03243: translation initiation factor 5B
7 Sobic.007G043500 DNA topoisomerase 1, putative, expressed K03163: DNA topoisomerase I
8 Sobic.004G256200 B-box (BBX) protein(PubMedID : 30626335)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@CCT/B-box zinc finger protein, putative, expressed -
9 Sobic.002G001600 MBTB12 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed K10523: speckle-type POZ protein
10 Sobic.003G121400 Homologous to Dof genes in Arabidopsis and rice.(PubMedID : 21161392)@expressed protein -
11 Sobic.002G067800 - -
12 Sobic.010G218100 expressed protein -
13 Sobic.006G123900 chloroplastic group IIA intron splicing facilitator CRS1, chloroplast precursor, putative, expressed -
14 Sobic.008G101800 expressed protein -
15 Sobic.004G332300 zinc finger, C3HC4 type domain containing protein, expressed -
16 Sobic.005G059100 bromodomain domain containing protein, expressed -
17 Sobic.005G142000 expressed protein -
18 Sobic.002G095700 C2-BTB1 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with C2 subfamily conserved sequence, expressed K10523: speckle-type POZ protein
19 Sobic.008G073000 expressed protein -
20 Sobic.007G008800 VHS and GAT domain containing protein, expressed -


Gene co-expression network
sample Sobic006G120400 Sobic006G120400 Sobic009G242800 Sobic009G242800 Sobic006G120400--Sobic009G242800 Sobic002G341100 Sobic002G341100 Sobic006G120400--Sobic002G341100 Sobic006G203200 Sobic006G203200 Sobic006G120400--Sobic006G203200 Sobic007G155900 Sobic007G155900 Sobic006G120400--Sobic007G155900 Sobic008G015700 Sobic008G015700 Sobic006G120400--Sobic008G015700 Sobic008G106000 Sobic008G106000 Sobic006G120400--Sobic008G106000 Sobic007G043500 Sobic007G043500 Sobic006G120400--Sobic007G043500 Sobic004G256200 Sobic004G256200 Sobic006G120400--Sobic004G256200 Sobic002G001600 Sobic002G001600 Sobic006G120400--Sobic002G001600 Sobic010G218100 Sobic010G218100 Sobic009G242800--Sobic010G218100 Sobic009G242800--Sobic006G120400 Sobic008G101800 Sobic008G101800 Sobic009G242800--Sobic008G101800 Sobic005G162600 Sobic005G162600 Sobic009G242800--Sobic005G162600 Sobic002G253500 Sobic002G253500 Sobic009G242800--Sobic002G253500 Sobic010G218500 Sobic010G218500 Sobic009G242800--Sobic010G218500 Sobic009G242800--Sobic006G203200 Sobic002G221900 Sobic002G221900 Sobic009G242800--Sobic002G221900 Sobic001G222300 Sobic001G222300 Sobic009G242800--Sobic001G222300 Sobic001G033400 Sobic001G033400 Sobic002G341100--Sobic001G033400 Sobic001G041400 Sobic001G041400 Sobic002G341100--Sobic001G041400 Sobic006G278200 Sobic006G278200 Sobic002G341100--Sobic006G278200 Sobic002G095700 Sobic002G095700 Sobic002G341100--Sobic002G095700 Sobic002G067800 Sobic002G067800 Sobic002G341100--Sobic002G067800 Sobic003G035500 Sobic003G035500 Sobic002G341100--Sobic003G035500 Sobic008G073000 Sobic008G073000 Sobic002G341100--Sobic008G073000 Sobic002G341100--Sobic004G256200 Sobic002G341100--Sobic006G120400 Sobic002G016900 Sobic002G016900 Sobic006G203200--Sobic002G016900 Sobic003G244700 Sobic003G244700 Sobic006G203200--Sobic003G244700 Sobic002G253600 Sobic002G253600 Sobic006G203200--Sobic002G253600 Sobic006G203200--Sobic006G120400 Sobic006G203200--Sobic002G341100 Sobic001G130700 Sobic001G130700 Sobic006G203200--Sobic001G130700 Sobic008G156200 Sobic008G156200 Sobic006G203200--Sobic008G156200 Sobic006G203200--Sobic009G242800 Sobic002G002500 Sobic002G002500 Sobic006G203200--Sobic002G002500 Sobic007G216900 Sobic007G216900 Sobic007G155900--Sobic007G216900 Sobic002G347700 Sobic002G347700 Sobic007G155900--Sobic002G347700 Sobic007G155900--Sobic002G341100 Sobic001G063100 Sobic001G063100 Sobic007G155900--Sobic001G063100 Sobic007G155900--Sobic002G067800 Sobic007G155900--Sobic006G120400 Sobic002G164400 Sobic002G164400 Sobic007G155900--Sobic002G164400 Sobic008G165100 Sobic008G165100 Sobic007G155900--Sobic008G165100 Sobic007G155900--Sobic002G095700 SobicK009900 SobicK009900 Sobic008G015700--SobicK009900 Sobic005G139800 Sobic005G139800 Sobic008G015700--Sobic005G139800 Sobic002G410200 Sobic002G410200 Sobic008G015700--Sobic002G410200 Sobic007G008800 Sobic007G008800 Sobic008G015700--Sobic007G008800 Sobic001G271801 Sobic001G271801 Sobic008G015700--Sobic001G271801 Sobic001G272000 Sobic001G272000 Sobic008G015700--Sobic001G272000 Sobic003G121400 Sobic003G121400 Sobic008G015700--Sobic003G121400 Sobic001G287301 Sobic001G287301 Sobic008G015700--Sobic001G287301 Sobic008G049701 Sobic008G049701 Sobic008G015700--Sobic008G049701 Sobic001G543900 Sobic001G543900 Sobic008G106000--Sobic001G543900 Sobic008G106000--Sobic002G001600 Sobic006G123900 Sobic006G123900 Sobic008G106000--Sobic006G123900 Sobic002G313300 Sobic002G313300 Sobic008G106000--Sobic002G313300 Sobic007G185900 Sobic007G185900 Sobic008G106000--Sobic007G185900 Sobic002G330400 Sobic002G330400 Sobic008G106000--Sobic002G330400 Sobic006G009400 Sobic006G009400 Sobic008G106000--Sobic006G009400 Sobic008G116500 Sobic008G116500 Sobic008G106000--Sobic008G116500 Sobic002G077200 Sobic002G077200 Sobic008G106000--Sobic002G077200 Sobic005G059100 Sobic005G059100 Sobic007G043500--Sobic005G059100 Sobic002G159200 Sobic002G159200 Sobic007G043500--Sobic002G159200 Sobic007G043500--Sobic006G123900 Sobic007G043500--Sobic002G067800 Sobic010G194700 Sobic010G194700 Sobic007G043500--Sobic010G194700 Sobic001G405300 Sobic001G405300 Sobic007G043500--Sobic001G405300 Sobic007G043500--Sobic008G073000 Sobic006G080300 Sobic006G080300 Sobic007G043500--Sobic006G080300 Sobic007G043500--Sobic008G106000 Sobic004G256200--Sobic002G341100 Sobic006G261100 Sobic006G261100 Sobic004G256200--Sobic006G261100 Sobic001G116100 Sobic001G116100 Sobic004G256200--Sobic001G116100 Sobic004G250900 Sobic004G250900 Sobic004G256200--Sobic004G250900 Sobic004G256200--Sobic006G120400 Sobic001G218200 Sobic001G218200 Sobic004G256200--Sobic001G218200 Sobic002G276900 Sobic002G276900 Sobic004G256200--Sobic002G276900 Sobic004G256200--Sobic008G073000 Sobic004G256200--Sobic002G095700 Sobic002G001600--Sobic008G116500 Sobic002G001600--Sobic001G543900 Sobic002G001600--Sobic002G313300 Sobic002G001600--Sobic008G101800 Sobic002G001600--Sobic007G185900 Sobic002G166700 Sobic002G166700 Sobic002G001600--Sobic002G166700 Sobic002G001600--Sobic008G106000 Sobic007G037100 Sobic007G037100 Sobic002G001600--Sobic007G037100 Sobic002G166600 Sobic002G166600 Sobic002G001600--Sobic002G166600
Octagon: transcription factors


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