Gene annotation
Transcriptome id Sobic.003G121400.1
Synonym SbDof15, DNA binding with One Finger, Sb03g010280, CDF2
Functional annotation Homologous to Dof genes in Arabidopsis and rice. (PubMedID : 21161392)
expressed protein
UniProt E6PBM2 , C5XGH6
Pfam PF02701
Panther DB PTHR31089 PTHR31089:SF3
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0006355; regulation of transcription, DNA-templated GO:0003677DNA binding


Orthologs (automatic annotation)
TAIR AT5G39660 : cycling DOF factor 2
RAP-DB (Rice) LOC_Os01g15900.1 : expressed protein
MaizeGDB (Corn) Zm00025a024036
Brachypodium KQK03769
Barley HORVU3Hr1G036870.15 , HORVU3Hr1G036870.17 , HORVU3Hr1G036870.16 , HORVU3Hr1G036870.19 , HORVU3Hr1G036870.18 , HORVU3Hr1G036870.20 , HORVU3Hr1G036870.21 , HORVU3Hr1G036870.22 , HORVU3Hr1G036870.23
Wheat TraesCS3B02G210300 , TraesCS3A02G180600 , TraesCS3D02G185500 , TraesCS3D02G185500
Populus -


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cDNA sequences
Sobic.003G121400


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G515600 expressed protein -
2 Sobic.004G279300 photoperiodic flowering time gene(PubMedID : 22394582)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@MYB family transcription factor, putative, expressed -
3 Sobic.005G117901 - -
4 Sobic.003G117000 late embryogenesis abundant protein, putative, expressed -
5 Sobic.005G130450 - -
6 Sobic.007G211000 helix-loop-helix DNA-binding domain containing protein, expressed -
7 Sobic.001G024200 lipase class 3 family protein, putative, expressed -
8 Sobic.001G222300 cyclin-dependent kinase inhibitor, putative, expressed -
9 Sobic.004G208400 B-box (BBX) protein(PubMedID : 30626335)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@B-box zinc finger family protein, putative, expressed -
10 Sobic.004G096200 - -
11 Sobic.002G115801 - -
12 Sobic.008G015700 major facilitator superfamily antiporter, putative, expressed -
13 Sobic.001G243901 - -
14 Sobic.010G218500 bZIP transcription factor domain containing protein, expressed -
15 Sobic.001G439500 acyl CoA binding protein, putative, expressed -
16 Sobic.004G112500 - -
17 Sobic.001G451000 two-component response regulator, putative, expressed K14491: two-component response regulator ARR-B family
18 Sobic.010G218100 expressed protein -
19 Sobic.008G101350 - -
20 Sobic.K009900 autophagy-related protein 8D, putative, expressed K08341: GABARAP, ATG8, GABA(A) receptor-associated protein


Gene co-expression network
sample Sobic003G121400 Sobic003G121400 Sobic001G515600 Sobic001G515600 Sobic003G121400--Sobic001G515600 Sobic004G279300 Sobic004G279300 Sobic003G121400--Sobic004G279300 Sobic005G117901 Sobic005G117901 Sobic003G121400--Sobic005G117901 Sobic003G117000 Sobic003G117000 Sobic003G121400--Sobic003G117000 Sobic005G130450 Sobic005G130450 Sobic003G121400--Sobic005G130450 Sobic007G211000 Sobic007G211000 Sobic003G121400--Sobic007G211000 Sobic001G024200 Sobic001G024200 Sobic003G121400--Sobic001G024200 Sobic001G222300 Sobic001G222300 Sobic003G121400--Sobic001G222300 Sobic004G208400 Sobic004G208400 Sobic003G121400--Sobic004G208400 Sobic001G515600--Sobic003G121400 Sobic001G515600--Sobic004G279300 Sobic001G515600--Sobic005G117901 Sobic001G515600--Sobic005G130450 Sobic001G515600--Sobic007G211000 Sobic004G096200 Sobic004G096200 Sobic001G515600--Sobic004G096200 Sobic001G515600--Sobic001G024200 Sobic001G243901 Sobic001G243901 Sobic001G515600--Sobic001G243901 Sobic001G515600--Sobic003G117000 Sobic004G279300--Sobic001G515600 Sobic004G279300--Sobic003G121400 Sobic004G279300--Sobic005G117901 Sobic004G279300--Sobic005G130450 Sobic004G279300--Sobic004G096200 Sobic004G279300--Sobic003G117000 Sobic004G279300--Sobic001G243901 Sobic004G279300--Sobic007G211000 Sobic004G279300--Sobic004G208400 Sobic005G117901--Sobic001G243901 Sobic008G101350 Sobic008G101350 Sobic005G117901--Sobic008G101350 Sobic005G117901--Sobic004G096200 Sobic005G117901--Sobic005G130450 Sobic005G117901--Sobic004G279300 Sobic005G117901--Sobic001G515600 Sobic005G117901--Sobic007G211000 Sobic002G048300 Sobic002G048300 Sobic005G117901--Sobic002G048300 Sobic003G117000--Sobic007G211000 Sobic002G284200 Sobic002G284200 Sobic003G117000--Sobic002G284200 Sobic007G150200 Sobic007G150200 Sobic003G117000--Sobic007G150200 Sobic003G117000--Sobic005G117901 Sobic010G218500 Sobic010G218500 Sobic003G117000--Sobic010G218500 Sobic003G117000--Sobic001G024200 Sobic003G117000--Sobic001G243901 Sobic003G117000--Sobic003G121400 Sobic003G036950 Sobic003G036950 Sobic003G117000--Sobic003G036950 Sobic005G130450--Sobic005G117901 Sobic005G130450--Sobic004G096200 Sobic005G130450--Sobic001G515600 Sobic005G130450--Sobic008G101350 Sobic005G130450--Sobic004G279300 Sobic005G130450--Sobic001G243901 Sobic005G130450--Sobic007G211000 Sobic005G130450--Sobic003G121400 Sobic004G112500 Sobic004G112500 Sobic005G130450--Sobic004G112500 Sobic007G211000--Sobic001G024200 Sobic007G211000--Sobic004G112500 Sobic010G124001 Sobic010G124001 Sobic007G211000--Sobic010G124001 Sobic007G211000--Sobic003G117000 Sobic001G272000 Sobic001G272000 Sobic007G211000--Sobic001G272000 Sobic007G211000--Sobic001G243901 Sobic007G211000--Sobic005G117901 Sobic004G212800 Sobic004G212800 Sobic007G211000--Sobic004G212800 Sobic010G248200 Sobic010G248200 Sobic007G211000--Sobic010G248200 Sobic001G024200--Sobic004G212800 Sobic001G024200--Sobic007G211000 Sobic001G024200--Sobic004G112500 Sobic003G204000 Sobic003G204000 Sobic001G024200--Sobic003G204000 Sobic001G024200--Sobic001G272000 Sobic004G164600 Sobic004G164600 Sobic001G024200--Sobic004G164600 SobicK009900 SobicK009900 Sobic001G024200--SobicK009900 Sobic001G439500 Sobic001G439500 Sobic001G024200--Sobic001G439500 Sobic001G024200--Sobic010G248200 Sobic007G037100 Sobic007G037100 Sobic001G222300--Sobic007G037100 Sobic005G162600 Sobic005G162600 Sobic001G222300--Sobic005G162600 Sobic008G101800 Sobic008G101800 Sobic001G222300--Sobic008G101800 Sobic001G222300--Sobic007G211000 Sobic004G188300 Sobic004G188300 Sobic001G222300--Sobic004G188300 Sobic002G001600 Sobic002G001600 Sobic001G222300--Sobic002G001600 Sobic001G451000 Sobic001G451000 Sobic001G222300--Sobic001G451000 Sobic008G116500 Sobic008G116500 Sobic001G222300--Sobic008G116500 Sobic001G222300--Sobic002G284200 Sobic006G173000 Sobic006G173000 Sobic004G208400--Sobic006G173000 Sobic002G291700 Sobic002G291700 Sobic004G208400--Sobic002G291700 Sobic004G208400--Sobic004G279300 Sobic004G208400--Sobic007G211000 Sobic006G137400 Sobic006G137400 Sobic004G208400--Sobic006G137400 Sobic004G208400--Sobic003G121400 Sobic004G208400--Sobic004G096200 Sobic004G208400--Sobic007G037100 Sobic004G208400--Sobic001G515600
Octagon: transcription factors


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