Gene annotation
| Transcriptome id |
Sobic.008G015700.1 |
|---|
| Synonym |
ZIFL1 |
|---|
| Functional annotation |
major facilitator superfamily antiporter, putative, expressed |
|---|
| UniProt |
C5YQL1 |
|---|
| Pfam |
PF07690 |
|---|
| Panther DB |
PTHR23504
PTHR23504:SF33 |
|---|
| NCBI CDD |
KOG2615; Permease of the major facilitator superfamily |
|---|
| KEGG Orthology |
- |
|---|
| Gene Ontology |
GO:0016021; integral component of membrane |
|---|
Orthologs (automatic annotation)
| TAIR |
AT5G13750 : zinc induced facilitator-like 1 |
|---|
| RAP-DB (Rice) |
LOC_Os12g03899.3 : major facilitator superfamily antiporter, putative, expressed |
|---|
| MaizeGDB (Corn) |
Zm00025a013126 |
|---|
| Brachypodium |
KQJ89552 |
|---|
| Barley |
HORVU4Hr1G026390.22
, HORVU4Hr1G026390.4
, HORVU4Hr1G026390.8
, HORVU4Hr1G026390.18
, HORVU4Hr1G026390.19
, HORVU4Hr1G026390.17
, HORVU4Hr1G026390.10
, HORVU4Hr1G026390.11
, HORVU4Hr1G026390.21
, HORVU4Hr1G026390.23
, HORVU4Hr1G026390.20
, HORVU4Hr1G026390.25
, HORVU4Hr1G026390.26
, HORVU4Hr1G026390.24
, HORVU4Hr1G026340.20
, HORVU4Hr1G026340.21
, HORVU4Hr1G026340.22
, HORVU4Hr1G026340.23
, HORVU4Hr1G026340.24
, HORVU4Hr1G026340.25
, HORVU4Hr1G026340.26
, HORVU4Hr1G026340.9
, HORVU4Hr1G026340.8
, HORVU4Hr1G026340.1
, HORVU4Hr1G026340.3
, HORVU4Hr1G026340.2
, HORVU4Hr1G026340.5
, HORVU4Hr1G026340.6
, HORVU4Hr1G026340.19
, HORVU4Hr1G026340.18
, HORVU4Hr1G026340.15
, HORVU4Hr1G026340.14
, HORVU4Hr1G026340.17
, HORVU4Hr1G026340.16
, HORVU4Hr1G026340.11
, HORVU4Hr1G026340.10
, HORVU4Hr1G026340.13
, HORVU4Hr1G026340.12 |
|---|
| Wheat |
TraesCS4D02G125800
, TraesCS4B02G096700
, TraesCS4A02G218000
, TraesCS4A02G218000
, TraesCS4A02G218000
, TraesCS4A02G218000
, TraesCS4B02G131500
, TraesCS4B02G131500
, TraesCS4B02G131500
, TraesCS4A02G187600
, TraesCS4A02G187600
, TraesCS4A02G187600
, TraesCS4D02G093100 |
|---|
| Populus |
- |
|---|
JBrowse
Expression pattern by RNA-Seq analysis
| FPKM plot |
 |
Find similar expressed genes
| Top 20 genes with similar expressed profiles |
 |
| Rank |
Gene |
Function |
KEGG orthology |
|---|
| 1 |
Sobic.K009900 |
autophagy-related protein 8D, putative, expressed |
K08341: GABARAP, ATG8, GABA(A) receptor-associated protein |
| 2 |
Sobic.005G139800 |
Brix domain containing protein, putative, expressed |
- |
| 3 |
Sobic.002G410200 |
SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein |
- |
| 4 |
Sobic.007G008800 |
VHS and GAT domain containing protein, expressed |
- |
| 5 |
Sobic.001G271801 |
- |
- |
| 6 |
Sobic.001G272000 |
- |
- |
| 7 |
Sobic.003G121400 |
Homologous to Dof genes in Arabidopsis and rice.(PubMedID : 21161392)@expressed protein |
- |
| 8 |
Sobic.001G287301 |
- |
- |
| 9 |
Sobic.008G049701 |
- |
- |
| 10 |
Sobic.001G024200 |
lipase class 3 family protein, putative, expressed |
- |
| 11 |
Sobic.002G115801 |
- |
- |
| 12 |
Sobic.003G026300 |
BES1/BZR1 homolog protein, putative, expressed |
- |
| 13 |
Sobic.001G543900 |
H(+)-ATPase 7(PubMedID : 26320239)@E1-E2 ATPase domain containing protein, expressed |
K01535: PMA1, H+-transporting ATPase |
| 14 |
Sobic.005G117801 |
- |
- |
| 15 |
Sobic.002G001600 |
MBTB12 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed |
K10523: speckle-type POZ protein |
| 16 |
Sobic.008G042250 |
- |
- |
| 17 |
Sobic.002G166700 |
cyclin, putative, expressed |
- |
| 18 |
Sobic.004G076732 |
- |
K14800: pre-rRNA-processing protein TSR2 |
| 19 |
Sobic.009G209800 |
OsFBX49 - F-box domain containing protein, expressed |
- |
| 20 |
Sobic.002G166600 |
cyclin, putative, expressed |
- |
Gene co-expression network
|
|
Octagon: transcription factors
