Gene annotation
Transcriptome id Sobic.010G218100.1
Synonym
Functional annotation expressed protein
UniProt A0A194YLR6
Pfam -
Panther DB PTHR33384 PTHR33384:SF6
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G02555 : -
RAP-DB (Rice) LOC_Os06g45090.2 : expressed protein
MaizeGDB (Corn) Zm00025a051724
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.010G218100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G218500 bZIP transcription factor domain containing protein, expressed -
2 Sobic.003G117000 late embryogenesis abundant protein, putative, expressed -
3 Sobic.006G122400 uncharacterized glycosyltransferase, putative, expressed -
4 Sobic.004G188300 regulation of Al tolerance genes and proton tolerance genes(PubMedID : 29541086)@ZOS2-11 - C2H2 zinc finger protein, expressed -
5 Sobic.007G150200 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@MTD1, putative, expressed -
6 Sobic.001G222300 cyclin-dependent kinase inhibitor, putative, expressed -
7 Sobic.002G039500 expressed protein -
8 Sobic.002G253500 FAD dependent oxidoreductase domain containing protein, expressed K00306: sarcosine oxidase / L-pipecolate oxidase
9 Sobic.009G242800 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./late senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@protein kinase domain containing protein, expressed -
10 Sobic.002G284200 peroxisomal multifunctional enzyme type 2, putative, expressed -
11 Sobic.002G221900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@Decreased expression in phyB-1 mutant(PubMedID : 26893475)@1-aminocyclopropane-1-carboxylate oxidase protein, putative, expressed K05933: aminocyclopropanecarboxylate oxidase
12 Sobic.007G023700 MA3 domain containing protein, expressed -
13 Sobic.003G121400 Homologous to Dof genes in Arabidopsis and rice.(PubMedID : 21161392)@expressed protein -
14 Sobic.005G181000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Acyl-CoA oxidase 2 ACX2 (At)(PubMedID : 27208977)@Acyl-CoA oxidase 2 ACX2 (At)(PubMedID : 27208977)@acyl-coenzyme A oxidase, putative, expressed K00232: E1.3.3.6, ACOX1, acyl-CoA oxidase
15 Sobic.001G024200 lipase class 3 family protein, putative, expressed -
16 Sobic.001G326900 PPDK(PubMedID : 19549309)@phyruvate phosphate dikinase(PubMedID : 26904072)@-(PubMedID : 26976818)@pyruvate, phosphate dikinase, chloroplast precursor, putative, expressed K01006: pyruvate, orthophosphate dikinase
17 Sobic.005G162600 zinc knuckle domain containing protein, expressed -
18 Sobic.007G211000 helix-loop-helix DNA-binding domain containing protein, expressed -
19 Sobic.006G257900 ubiquitin-conjugating enzyme, putative, expressed K06689: UBE2D, UBC4, ubiquitin-conjugating enzyme E2 D
20 Sobic.010G154150 - -


Gene co-expression network
sample Sobic010G218100 Sobic010G218100 Sobic010G218500 Sobic010G218500 Sobic010G218100--Sobic010G218500 Sobic003G117000 Sobic003G117000 Sobic010G218100--Sobic003G117000 Sobic006G122400 Sobic006G122400 Sobic010G218100--Sobic006G122400 Sobic004G188300 Sobic004G188300 Sobic010G218100--Sobic004G188300 Sobic007G150200 Sobic007G150200 Sobic010G218100--Sobic007G150200 Sobic001G222300 Sobic001G222300 Sobic010G218100--Sobic001G222300 Sobic002G039500 Sobic002G039500 Sobic010G218100--Sobic002G039500 Sobic002G253500 Sobic002G253500 Sobic010G218100--Sobic002G253500 Sobic009G242800 Sobic009G242800 Sobic010G218100--Sobic009G242800 Sobic010G248200 Sobic010G248200 Sobic010G218500--Sobic010G248200 Sobic001G243901 Sobic001G243901 Sobic010G218500--Sobic001G243901 Sobic005G117901 Sobic005G117901 Sobic010G218500--Sobic005G117901 Sobic010G218500--Sobic002G253500 Sobic008G101350 Sobic008G101350 Sobic010G218500--Sobic008G101350 Sobic004G096200 Sobic004G096200 Sobic010G218500--Sobic004G096200 Sobic007G211000 Sobic007G211000 Sobic010G218500--Sobic007G211000 Sobic002G108800 Sobic002G108800 Sobic010G218500--Sobic002G108800 Sobic001G345333 Sobic001G345333 Sobic010G218500--Sobic001G345333 Sobic003G117000--Sobic007G211000 Sobic002G284200 Sobic002G284200 Sobic003G117000--Sobic002G284200 Sobic003G117000--Sobic007G150200 Sobic003G117000--Sobic005G117901 Sobic003G117000--Sobic010G218500 Sobic001G024200 Sobic001G024200 Sobic003G117000--Sobic001G024200 Sobic003G117000--Sobic001G243901 Sobic003G121400 Sobic003G121400 Sobic003G117000--Sobic003G121400 Sobic003G036950 Sobic003G036950 Sobic003G117000--Sobic003G036950 Sobic009G027000 Sobic009G027000 Sobic006G122400--Sobic009G027000 Sobic006G122400--Sobic010G218100 Sobic005G181000 Sobic005G181000 Sobic006G122400--Sobic005G181000 Sobic006G122400--Sobic002G284200 Sobic006G124900 Sobic006G124900 Sobic006G122400--Sobic006G124900 Sobic002G165300 Sobic002G165300 Sobic006G122400--Sobic002G165300 Sobic007G078000 Sobic007G078000 Sobic006G122400--Sobic007G078000 Sobic006G122400--Sobic010G218500 Sobic007G130600 Sobic007G130600 Sobic006G122400--Sobic007G130600 Sobic003G026300 Sobic003G026300 Sobic004G188300--Sobic003G026300 Sobic003G093600 Sobic003G093600 Sobic004G188300--Sobic003G093600 Sobic004G188300--Sobic001G222300 Sobic004G188300--Sobic007G150200 Sobic009G183500 Sobic009G183500 Sobic004G188300--Sobic009G183500 Sobic007G023700 Sobic007G023700 Sobic004G188300--Sobic007G023700 Sobic006G257900 Sobic006G257900 Sobic004G188300--Sobic006G257900 Sobic005G167300 Sobic005G167300 Sobic004G188300--Sobic005G167300 Sobic004G188300--Sobic010G218100 Sobic007G150200--Sobic002G284200 Sobic007G150200--Sobic003G117000 Sobic007G150200--Sobic007G023700 Sobic007G150200--Sobic003G093600 Sobic007G150200--Sobic004G188300 Sobic001G225100 Sobic001G225100 Sobic007G150200--Sobic001G225100 Sobic007G150200--Sobic005G167300 Sobic007G150200--Sobic010G218500 Sobic007G150200--Sobic010G218100 Sobic007G037100 Sobic007G037100 Sobic001G222300--Sobic007G037100 Sobic005G162600 Sobic005G162600 Sobic001G222300--Sobic005G162600 Sobic008G101800 Sobic008G101800 Sobic001G222300--Sobic008G101800 Sobic001G222300--Sobic007G211000 Sobic001G222300--Sobic004G188300 Sobic002G001600 Sobic002G001600 Sobic001G222300--Sobic002G001600 Sobic001G451000 Sobic001G451000 Sobic001G222300--Sobic001G451000 Sobic008G116500 Sobic008G116500 Sobic001G222300--Sobic008G116500 Sobic001G222300--Sobic002G284200 Sobic002G039500--Sobic002G253500 Sobic002G039500--Sobic007G023700 Sobic002G039500--Sobic002G108800 Sobic007G156500 Sobic007G156500 Sobic002G039500--Sobic007G156500 Sobic002G221900 Sobic002G221900 Sobic002G039500--Sobic002G221900 Sobic004G212800 Sobic004G212800 Sobic002G039500--Sobic004G212800 Sobic009G231300 Sobic009G231300 Sobic002G039500--Sobic009G231300 Sobic003G044900 Sobic003G044900 Sobic002G039500--Sobic003G044900 Sobic007G073400 Sobic007G073400 Sobic002G039500--Sobic007G073400 Sobic002G253500--Sobic010G248200 Sobic002G253500--Sobic002G108800 Sobic002G253500--Sobic007G156500 Sobic002G253500--Sobic002G039500 Sobic002G253500--Sobic001G345333 Sobic002G007250 Sobic002G007250 Sobic002G253500--Sobic002G007250 Sobic002G253500--Sobic004G212800 Sobic002G253500--Sobic010G218500 Sobic008G161401 Sobic008G161401 Sobic002G253500--Sobic008G161401 Sobic009G242800--Sobic010G218100 Sobic006G120400 Sobic006G120400 Sobic009G242800--Sobic006G120400 Sobic009G242800--Sobic008G101800 Sobic009G242800--Sobic005G162600 Sobic009G242800--Sobic002G253500 Sobic009G242800--Sobic010G218500 Sobic006G203200 Sobic006G203200 Sobic009G242800--Sobic006G203200 Sobic009G242800--Sobic002G221900 Sobic009G242800--Sobic001G222300
Octagon: transcription factors


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