Gene annotation
Transcriptome id Sobic.005G181000.4,Sobic.005G181000.3
Synonym ACX2, Sb05g023970, ATACX2
Functional annotation "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence." (PubMedID : 27586543)
Acyl-CoA oxidase 2 ACX2 (At) (PubMedID : 27208977)
Acyl-CoA oxidase 2 ACX2 (At) (PubMedID : 27208977)
acyl-coenzyme A oxidase, putative, expressed
UniProt A0A1Z5RJP1 , A0A1Z5RJ99
Pfam PF00441 PF02770 PF01756 PF01756 PF00441 PF02770
Panther DB PTHR10909 PTHR10909:SF317
NCBI CDD -
KEGG Orthology K00232; E1.3.3.6, ACOX1, acyl-CoA oxidase
Gene Ontology GO:0016627; oxidoreductase activity, acting on the CH-CH group of donors GO:0003995acyl-CoA dehydrogenase activity GO:0006635fatty acid beta-oxidation GO:0005777peroxisome GO:0003997acyl-CoA oxidase activity GO:0006635fatty acid beta-oxidation GO:0005777peroxisome GO:0003997acyl-CoA oxidase activity GO:0016627oxidoreductase activity, acting on the CH-CH group of donors GO:0003995acyl-CoA dehydrogenase activity


Orthologs (automatic annotation)
TAIR AT5G65110 : acyl-CoA oxidase 2
RAP-DB (Rice) LOC_Os11g39220.1 : acyl-coenzyme A oxidase, putative, expressed
MaizeGDB (Corn) Zm00025a033848 , Zm00025a011464 , Zm00025a020911 , Zm00025a029424
Brachypodium KQJ87886
Barley HORVU7Hr1G029110.2 , HORVU7Hr1G029110.3 , HORVU7Hr1G029110.1 , HORVU7Hr1G045800.8 , HORVU7Hr1G045800.6 , HORVU7Hr1G045800.7 , HORVU7Hr1G045800.4 , HORVU7Hr1G045800.5 , HORVU7Hr1G045800.2 , HORVU7Hr1G045800.3
Wheat TraesCS7D02G225100 , TraesCS7D02G143200 , TraesCS7B02G044200 , TraesCS7B02G044200 , TraesCS7A02G141800 , TraesCS7A02G223500 , TraesCS7A02G223500 , TraesCS7B02G190300
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G130600 methylcrotonoyl-CoA carboxylase beta chain, mitochondrial precursor, putative, expressed K01969: 3-methylcrotonyl-CoA carboxylase beta subunit
2 Sobic.009G027000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@acyl-coenzyme A dehydrogenase, mitochondrial precursor, putative, expressed K00253: IVD, isovaleryl-CoA dehydrogenase
3 Sobic.006G122400 uncharacterized glycosyltransferase, putative, expressed -
4 Sobic.006G124900 MA3 domain containing protein, expressed -
5 Sobic.001G439500 acyl CoA binding protein, putative, expressed -
6 Sobic.002G253500 FAD dependent oxidoreductase domain containing protein, expressed K00306: sarcosine oxidase / L-pipecolate oxidase
7 Sobic.007G185900 IBR domain containing protein, putative, expressed K11968: ariadne-1
8 Sobic.002G313300 bromodomain domain containing protein, expressed -
9 Sobic.002G039500 expressed protein -
10 Sobic.001G543900 H(+)-ATPase 7(PubMedID : 26320239)@E1-E2 ATPase domain containing protein, expressed K01535: PMA1, H+-transporting ATPase
11 Sobic.007G078000 protein phosphatase 2C, putative, expressed K17506: PPM1L, protein phosphatase 1L
12 Sobic.008G160700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial precursor, putative, expressed K01968: 3-methylcrotonyl-CoA carboxylase alpha subunit
13 Sobic.002G001600 MBTB12 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed K10523: speckle-type POZ protein
14 Sobic.007G023700 MA3 domain containing protein, expressed -
15 Sobic.001G192900 DNA excision repair protein ERCC-1, putative, expressed K10849: DNA excision repair protein ERCC-1
16 Sobic.004G196700 expressed protein -
17 Sobic.010G218100 expressed protein -
18 Sobic.001G424700 CAMK_CAMK_like_ULKh_APGy.2 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K08269: ULK2, serine/threonine-protein kinase ULK2
19 Sobic.001G194900 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@FAD dependent oxidoreductase domain containing protein, expressed K00311: electron-transferring-flavoprotein dehydrogenase
20 Sobic.010G078100 pantothenate kinase, putative, expressed K09680: type II pantothenate kinase


Gene co-expression network
sample Sobic005G181000 Sobic005G181000 Sobic007G130600 Sobic007G130600 Sobic005G181000--Sobic007G130600 Sobic009G027000 Sobic009G027000 Sobic005G181000--Sobic009G027000 Sobic006G122400 Sobic006G122400 Sobic005G181000--Sobic006G122400 Sobic006G124900 Sobic006G124900 Sobic005G181000--Sobic006G124900 Sobic001G439500 Sobic001G439500 Sobic005G181000--Sobic001G439500 Sobic002G253500 Sobic002G253500 Sobic005G181000--Sobic002G253500 Sobic007G185900 Sobic007G185900 Sobic005G181000--Sobic007G185900 Sobic002G313300 Sobic002G313300 Sobic005G181000--Sobic002G313300 Sobic002G039500 Sobic002G039500 Sobic005G181000--Sobic002G039500 Sobic001G194900 Sobic001G194900 Sobic007G130600--Sobic001G194900 Sobic007G130600--Sobic005G181000 Sobic008G160700 Sobic008G160700 Sobic007G130600--Sobic008G160700 Sobic007G130600--Sobic006G124900 Sobic005G177800 Sobic005G177800 Sobic007G130600--Sobic005G177800 Sobic007G130600--Sobic009G027000 Sobic010G001600 Sobic010G001600 Sobic007G130600--Sobic010G001600 Sobic009G083900 Sobic009G083900 Sobic007G130600--Sobic009G083900 Sobic007G078000 Sobic007G078000 Sobic007G130600--Sobic007G078000 Sobic009G027000--Sobic006G122400 Sobic009G027000--Sobic005G181000 Sobic009G027000--Sobic008G160700 Sobic004G297400 Sobic004G297400 Sobic009G027000--Sobic004G297400 Sobic010G078100 Sobic010G078100 Sobic009G027000--Sobic010G078100 Sobic009G027000--Sobic007G130600 Sobic001G156100 Sobic001G156100 Sobic009G027000--Sobic001G156100 Sobic009G027000--Sobic007G078000 Sobic004G320000 Sobic004G320000 Sobic009G027000--Sobic004G320000 Sobic006G122400--Sobic009G027000 Sobic010G218100 Sobic010G218100 Sobic006G122400--Sobic010G218100 Sobic006G122400--Sobic005G181000 Sobic002G284200 Sobic002G284200 Sobic006G122400--Sobic002G284200 Sobic006G122400--Sobic006G124900 Sobic002G165300 Sobic002G165300 Sobic006G122400--Sobic002G165300 Sobic006G122400--Sobic007G078000 Sobic010G218500 Sobic010G218500 Sobic006G122400--Sobic010G218500 Sobic006G122400--Sobic007G130600 Sobic006G124900--Sobic005G177800 Sobic006G124900--Sobic010G001600 Sobic004G196700 Sobic004G196700 Sobic006G124900--Sobic004G196700 Sobic001G543800 Sobic001G543800 Sobic006G124900--Sobic001G543800 Sobic010G276800 Sobic010G276800 Sobic006G124900--Sobic010G276800 Sobic006G124900--Sobic002G313300 Sobic001G477800 Sobic001G477800 Sobic006G124900--Sobic001G477800 Sobic006G124900--Sobic007G130600 Sobic002G300400 Sobic002G300400 Sobic006G124900--Sobic002G300400 Sobic001G024200 Sobic001G024200 Sobic001G439500--Sobic001G024200 Sobic004G143700 Sobic004G143700 Sobic001G439500--Sobic004G143700 Sobic007G211000 Sobic007G211000 Sobic001G439500--Sobic007G211000 Sobic008G116500 Sobic008G116500 Sobic001G439500--Sobic008G116500 Sobic004G112500 Sobic004G112500 Sobic001G439500--Sobic004G112500 Sobic001G451000 Sobic001G451000 Sobic001G439500--Sobic001G451000 Sobic001G543900 Sobic001G543900 Sobic001G439500--Sobic001G543900 Sobic002G001600 Sobic002G001600 Sobic001G439500--Sobic002G001600 Sobic002G283300 Sobic002G283300 Sobic001G439500--Sobic002G283300 Sobic010G248200 Sobic010G248200 Sobic002G253500--Sobic010G248200 Sobic002G108800 Sobic002G108800 Sobic002G253500--Sobic002G108800 Sobic007G156500 Sobic007G156500 Sobic002G253500--Sobic007G156500 Sobic002G253500--Sobic002G039500 Sobic001G345333 Sobic001G345333 Sobic002G253500--Sobic001G345333 Sobic002G007250 Sobic002G007250 Sobic002G253500--Sobic002G007250 Sobic004G212800 Sobic004G212800 Sobic002G253500--Sobic004G212800 Sobic002G253500--Sobic010G218500 Sobic008G161401 Sobic008G161401 Sobic002G253500--Sobic008G161401 Sobic007G185900--Sobic004G196700 Sobic002G157300 Sobic002G157300 Sobic007G185900--Sobic002G157300 Sobic007G185900--Sobic007G078000 Sobic010G260500 Sobic010G260500 Sobic007G185900--Sobic010G260500 Sobic007G185900--Sobic002G313300 Sobic008G054500 Sobic008G054500 Sobic007G185900--Sobic008G054500 Sobic003G397800 Sobic003G397800 Sobic007G185900--Sobic003G397800 Sobic005G149500 Sobic005G149500 Sobic007G185900--Sobic005G149500 Sobic003G187400 Sobic003G187400 Sobic007G185900--Sobic003G187400 Sobic002G313300--Sobic001G477800 Sobic002G077200 Sobic002G077200 Sobic002G313300--Sobic002G077200 Sobic007G011400 Sobic007G011400 Sobic002G313300--Sobic007G011400 Sobic010G263800 Sobic010G263800 Sobic002G313300--Sobic010G263800 Sobic002G313300--Sobic001G543900 Sobic006G080300 Sobic006G080300 Sobic002G313300--Sobic006G080300 Sobic006G009400 Sobic006G009400 Sobic002G313300--Sobic006G009400 Sobic002G313300--Sobic007G185900 Sobic004G031700 Sobic004G031700 Sobic002G313300--Sobic004G031700 Sobic002G039500--Sobic002G253500 Sobic007G023700 Sobic007G023700 Sobic002G039500--Sobic007G023700 Sobic002G039500--Sobic002G108800 Sobic002G039500--Sobic007G156500 Sobic002G221900 Sobic002G221900 Sobic002G039500--Sobic002G221900 Sobic002G039500--Sobic004G212800 Sobic009G231300 Sobic009G231300 Sobic002G039500--Sobic009G231300 Sobic003G044900 Sobic003G044900 Sobic002G039500--Sobic003G044900 Sobic007G073400 Sobic007G073400 Sobic002G039500--Sobic007G073400
Octagon: transcription factors


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