Gene annotation
Transcriptome id Sobic.010G078100.1,Sobic.010G078100.3
Synonym ATPANK2, Sb10g006780, PANK2
Functional annotation pantothenate kinase, putative, expressed
UniProt A0A194YIY9
Pfam PF03630
Panther DB PTHR12280 PTHR12280:SF29
NCBI CDD KOG2201; Pantothenate kinase PanK and related proteins
KEGG Orthology K09680; type II pantothenate kinase
Gene Ontology GO:0015937; coenzyme A biosynthetic process GO:0005524ATP binding GO:0004594pantothenate kinase activity


Orthologs (automatic annotation)
TAIR AT4G32180 : pantothenate kinase 2
RAP-DB (Rice) LOC_Os06g10520.1 : pantothenate kinase, putative, expressed
MaizeGDB (Corn) Zm00025a049617
Brachypodium PNT76247 , PNT76246 , KQK19090 , KQK19091 , KQK19089
Barley HORVU7Hr1G035030.8 , HORVU7Hr1G035030.9 , HORVU7Hr1G035030.1 , HORVU7Hr1G035030.2 , HORVU7Hr1G035030.3 , HORVU7Hr1G035030.4 , HORVU7Hr1G035030.5 , HORVU7Hr1G035030.6 , HORVU7Hr1G035030.7 , HORVU7Hr1G035030.10 , HORVU7Hr1G035030.11
Wheat TraesCS7D02G167900 , TraesCS7D02G167900 , TraesCS7B02G071900 , TraesCS7B02G071900 , TraesCS7B02G071900 , TraesCS7A02G167300 , TraesCS7A02G167300 , TraesCS7A02G167300
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G160700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial precursor, putative, expressed K01968: 3-methylcrotonyl-CoA carboxylase alpha subunit
2 Sobic.002G303000 disease resistant protein, identical, putative, expressed -
3 Sobic.009G121100 expressed protein -
4 Sobic.006G214500 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@lecithine cholesterol acyltransferase, putative, expressed -
5 Sobic.009G027000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@acyl-coenzyme A dehydrogenase, mitochondrial precursor, putative, expressed K00253: IVD, isovaleryl-CoA dehydrogenase
6 Sobic.001G359400 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed -
7 Sobic.001G373100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@RING finger and CHY zinc finger domain-containing protein 1, putative, expressed K10144: RCHY1, RING finger and CHY zinc finger domain-containing protein 1
8 Sobic.006G122400 uncharacterized glycosyltransferase, putative, expressed -
9 Sobic.004G295800 chaperone protein dnaJ, putative, expressed K09503: DnaJ homolog subfamily A member 2
10 Sobic.006G124900 MA3 domain containing protein, expressed -
11 Sobic.001G156100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@aminotransferase, putative, expressed K00819: rocD, ornithine--oxo-acid transaminase
12 Sobic.009G235900 transporter family protein, putative, expressed K08145: SLC2A8, MFS transporter, SP family, solute carrier family 2 (facilitated glucose transporter), member 8
13 Sobic.002G300400 serine/threonine-protein kinase CTR1, putative, expressed -
14 Sobic.004G196700 expressed protein -
15 Sobic.005G007800 F-box/LRR-repeat protein 3, putative, expressed K10268: F-box and leucine-rich repeat protein 2/20
16 Sobic.003G407300 histidine kinase, putative, expressed K14489: arabidopsis histidine kinase 2/3/4 (cytokinin receptor)
17 Sobic.005G181000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Acyl-CoA oxidase 2 ACX2 (At)(PubMedID : 27208977)@Acyl-CoA oxidase 2 ACX2 (At)(PubMedID : 27208977)@acyl-coenzyme A oxidase, putative, expressed K00232: E1.3.3.6, ACOX1, acyl-CoA oxidase
18 Sobic.007G130600 methylcrotonoyl-CoA carboxylase beta chain, mitochondrial precursor, putative, expressed K01969: 3-methylcrotonyl-CoA carboxylase beta subunit
19 Sobic.010G001600 homogentisate 1,2-dioxygenase, putative, expressed K00451: HGD, homogentisate 1,2-dioxygenase
20 Sobic.004G297400 enoyl-CoA hydratase/isomerase family protein, putative, expressed K05607: methylglutaconyl-CoA hydratase


Gene co-expression network
sample Sobic010G078100 Sobic010G078100 Sobic008G160700 Sobic008G160700 Sobic010G078100--Sobic008G160700 Sobic002G303000 Sobic002G303000 Sobic010G078100--Sobic002G303000 Sobic009G121100 Sobic009G121100 Sobic010G078100--Sobic009G121100 Sobic006G214500 Sobic006G214500 Sobic010G078100--Sobic006G214500 Sobic009G027000 Sobic009G027000 Sobic010G078100--Sobic009G027000 Sobic001G359400 Sobic001G359400 Sobic010G078100--Sobic001G359400 Sobic001G373100 Sobic001G373100 Sobic010G078100--Sobic001G373100 Sobic006G122400 Sobic006G122400 Sobic010G078100--Sobic006G122400 Sobic004G295800 Sobic004G295800 Sobic010G078100--Sobic004G295800 Sobic010G001600 Sobic010G001600 Sobic008G160700--Sobic010G001600 Sobic001G194900 Sobic001G194900 Sobic008G160700--Sobic001G194900 Sobic008G160700--Sobic010G078100 Sobic007G130600 Sobic007G130600 Sobic008G160700--Sobic007G130600 Sobic009G235900 Sobic009G235900 Sobic008G160700--Sobic009G235900 Sobic008G160700--Sobic006G214500 Sobic006G124900 Sobic006G124900 Sobic008G160700--Sobic006G124900 Sobic008G160700--Sobic002G303000 Sobic008G160700--Sobic009G027000 Sobic002G303000--Sobic010G078100 Sobic002G303000--Sobic009G121100 Sobic002G303000--Sobic008G160700 Sobic003G407300 Sobic003G407300 Sobic002G303000--Sobic003G407300 Sobic009G040700 Sobic009G040700 Sobic002G303000--Sobic009G040700 Sobic005G007800 Sobic005G007800 Sobic002G303000--Sobic005G007800 Sobic004G196700 Sobic004G196700 Sobic002G303000--Sobic004G196700 Sobic002G303000--Sobic009G235900 Sobic008G024600 Sobic008G024600 Sobic002G303000--Sobic008G024600 Sobic009G121100--Sobic006G214500 Sobic009G121100--Sobic003G407300 Sobic003G019100 Sobic003G019100 Sobic009G121100--Sobic003G019100 Sobic001G156100 Sobic001G156100 Sobic009G121100--Sobic001G156100 Sobic001G443900 Sobic001G443900 Sobic009G121100--Sobic001G443900 Sobic001G373200 Sobic001G373200 Sobic009G121100--Sobic001G373200 Sobic009G121100--Sobic010G078100 Sobic009G121100--Sobic004G295800 Sobic009G121100--Sobic002G303000 Sobic006G214500--Sobic009G121100 Sobic006G214500--Sobic001G443900 Sobic003G408500 Sobic003G408500 Sobic006G214500--Sobic003G408500 Sobic006G214500--Sobic008G160700 Sobic006G214500--Sobic010G078100 Sobic006G214500--Sobic001G156100 Sobic006G214500--Sobic003G407300 Sobic001G447500 Sobic001G447500 Sobic006G214500--Sobic001G447500 Sobic009G249200 Sobic009G249200 Sobic006G214500--Sobic009G249200 Sobic009G027000--Sobic006G122400 Sobic005G181000 Sobic005G181000 Sobic009G027000--Sobic005G181000 Sobic009G027000--Sobic008G160700 Sobic004G297400 Sobic004G297400 Sobic009G027000--Sobic004G297400 Sobic009G027000--Sobic010G078100 Sobic009G027000--Sobic007G130600 Sobic009G027000--Sobic001G156100 Sobic007G078000 Sobic007G078000 Sobic009G027000--Sobic007G078000 Sobic004G320000 Sobic004G320000 Sobic009G027000--Sobic004G320000 Sobic001G359400--Sobic009G235900 Sobic001G359400--Sobic010G078100 Sobic001G359400--Sobic005G007800 Sobic010G042900 Sobic010G042900 Sobic001G359400--Sobic010G042900 Sobic001G359400--Sobic002G303000 Sobic002G009600 Sobic002G009600 Sobic001G359400--Sobic002G009600 Sobic001G347600 Sobic001G347600 Sobic001G359400--Sobic001G347600 Sobic001G359400--Sobic001G373100 Sobic001G359400--Sobic008G160700 Sobic001G373100--Sobic008G160700 Sobic009G119200 Sobic009G119200 Sobic001G373100--Sobic009G119200 Sobic001G373100--Sobic010G078100 Sobic001G373100--Sobic001G156100 Sobic006G149700 Sobic006G149700 Sobic001G373100--Sobic006G149700 Sobic001G373100--Sobic009G027000 Sobic003G145900 Sobic003G145900 Sobic001G373100--Sobic003G145900 Sobic001G373100--Sobic001G359400 Sobic002G113300 Sobic002G113300 Sobic001G373100--Sobic002G113300 Sobic006G122400--Sobic009G027000 Sobic010G218100 Sobic010G218100 Sobic006G122400--Sobic010G218100 Sobic006G122400--Sobic005G181000 Sobic002G284200 Sobic002G284200 Sobic006G122400--Sobic002G284200 Sobic006G122400--Sobic006G124900 Sobic002G165300 Sobic002G165300 Sobic006G122400--Sobic002G165300 Sobic006G122400--Sobic007G078000 Sobic010G218500 Sobic010G218500 Sobic006G122400--Sobic010G218500 Sobic006G122400--Sobic007G130600 Sobic008G191100 Sobic008G191100 Sobic004G295800--Sobic008G191100 Sobic002G132000 Sobic002G132000 Sobic004G295800--Sobic002G132000 Sobic007G024700 Sobic007G024700 Sobic004G295800--Sobic007G024700 Sobic004G295800--Sobic009G121100 Sobic004G006200 Sobic004G006200 Sobic004G295800--Sobic004G006200 Sobic004G021100 Sobic004G021100 Sobic004G295800--Sobic004G021100 Sobic004G295800--Sobic001G373200 Sobic004G295800--Sobic003G407300 Sobic001G290000 Sobic001G290000 Sobic004G295800--Sobic001G290000
Octagon: transcription factors


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