Gene annotation
Transcriptome id Sobic.006G214500.1
Synonym Sb06g028470
Functional annotation SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence. (PubMedID : 27586543)
lecithine cholesterol acyltransferase, putative, expressed
UniProt C5YG09
Pfam PF02450
Panther DB PTHR11440 PTHR11440:SF3
NCBI CDD KOG2369; Lecithin:cholesterol acyltransferase (LCAT)/Acyl-ceramide synthase
KEGG Orthology -
Gene Ontology GO:0008374; O-acyltransferase activity GO:0006629lipid metabolic process


Orthologs (automatic annotation)
TAIR AT4G19860 : alpha/beta-Hydrolases superfamily protein
RAP-DB (Rice) LOC_Os04g52500.1 : lecithine cholesterol acyltransferase, putative, expressed
MaizeGDB (Corn) Zm00025a009798
Brachypodium KQJ84588
Barley -
Wheat TraesCS2B02G439900
Populus -


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cDNA sequences
Sobic.006G214500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G121100 expressed protein -
2 Sobic.001G443900 peptide transporter PTR2, putative, expressed -
3 Sobic.003G408500 beclin-1, putative, expressed K08334: BECN, VPS30, beclin
4 Sobic.008G160700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial precursor, putative, expressed K01968: 3-methylcrotonyl-CoA carboxylase alpha subunit
5 Sobic.010G078100 pantothenate kinase, putative, expressed K09680: type II pantothenate kinase
6 Sobic.001G156100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@aminotransferase, putative, expressed K00819: rocD, ornithine--oxo-acid transaminase
7 Sobic.003G407300 histidine kinase, putative, expressed K14489: arabidopsis histidine kinase 2/3/4 (cytokinin receptor)
8 Sobic.001G447500 aminotransferase domain containing protein, putative, expressed K00826: E2.6.1.42, branched-chain amino acid aminotransferase
9 Sobic.009G249200 transmembrane protein, putative, expressed -
10 Sobic.001G373200 lipase precursor, putative, expressed -
11 Sobic.006G138400 regulatory subunit, putative, expressed -
12 Sobic.003G019100 KIN, antigenic determinant of recA protein, putative, expressed K13102: DNA/RNA-binding protein KIN17
13 Sobic.007G024700 serine/threonine protein phosphatase 2A 59 kDa regulatory subunit Bgamma isoform, putative, expressed K11584: serine/threonine-protein phosphatase 2A regulatory subunit B'
14 Sobic.009G166300 HECT-domain domain containing protein, expressed K10590: E3 ubiquitin-protein ligase TRIP12
15 Sobic.001G543800 ethylene-responsive element-binding protein, putative, expressed -
16 Sobic.008G191100 nodulin, putative, expressed -
17 Sobic.004G295800 chaperone protein dnaJ, putative, expressed K09503: DnaJ homolog subfamily A member 2
18 Sobic.002G303000 disease resistant protein, identical, putative, expressed -
19 Sobic.002G132000 serine/threonine-protein kinase AFC2, putative, expressed K08287: dual-specificity kinase
20 Sobic.001G290000 enoyl-CoA hydratase/isomerase family protein, putative, expressed K05605: 3-hydroxyisobutyryl-CoA hydrolase


Gene co-expression network
sample Sobic006G214500 Sobic006G214500 Sobic009G121100 Sobic009G121100 Sobic006G214500--Sobic009G121100 Sobic001G443900 Sobic001G443900 Sobic006G214500--Sobic001G443900 Sobic003G408500 Sobic003G408500 Sobic006G214500--Sobic003G408500 Sobic008G160700 Sobic008G160700 Sobic006G214500--Sobic008G160700 Sobic010G078100 Sobic010G078100 Sobic006G214500--Sobic010G078100 Sobic001G156100 Sobic001G156100 Sobic006G214500--Sobic001G156100 Sobic003G407300 Sobic003G407300 Sobic006G214500--Sobic003G407300 Sobic001G447500 Sobic001G447500 Sobic006G214500--Sobic001G447500 Sobic009G249200 Sobic009G249200 Sobic006G214500--Sobic009G249200 Sobic009G121100--Sobic006G214500 Sobic009G121100--Sobic003G407300 Sobic003G019100 Sobic003G019100 Sobic009G121100--Sobic003G019100 Sobic009G121100--Sobic001G156100 Sobic009G121100--Sobic001G443900 Sobic001G373200 Sobic001G373200 Sobic009G121100--Sobic001G373200 Sobic009G121100--Sobic010G078100 Sobic004G295800 Sobic004G295800 Sobic009G121100--Sobic004G295800 Sobic002G303000 Sobic002G303000 Sobic009G121100--Sobic002G303000 Sobic001G443900--Sobic006G214500 Sobic001G443900--Sobic009G121100 Sobic003G005800 Sobic003G005800 Sobic001G443900--Sobic003G005800 Sobic001G443900--Sobic001G373200 Sobic001G443900--Sobic003G407300 Sobic006G138400 Sobic006G138400 Sobic001G443900--Sobic006G138400 Sobic001G443900--Sobic001G447500 Sobic001G443900--Sobic001G156100 Sobic009G229800 Sobic009G229800 Sobic001G443900--Sobic009G229800 Sobic009G166300 Sobic009G166300 Sobic003G408500--Sobic009G166300 Sobic005G045300 Sobic005G045300 Sobic003G408500--Sobic005G045300 Sobic001G512700 Sobic001G512700 Sobic003G408500--Sobic001G512700 Sobic004G205600 Sobic004G205600 Sobic003G408500--Sobic004G205600 Sobic007G217000 Sobic007G217000 Sobic003G408500--Sobic007G217000 Sobic003G397800 Sobic003G397800 Sobic003G408500--Sobic003G397800 Sobic004G021100 Sobic004G021100 Sobic003G408500--Sobic004G021100 Sobic001G109800 Sobic001G109800 Sobic003G408500--Sobic001G109800 Sobic004G067700 Sobic004G067700 Sobic003G408500--Sobic004G067700 Sobic010G001600 Sobic010G001600 Sobic008G160700--Sobic010G001600 Sobic001G194900 Sobic001G194900 Sobic008G160700--Sobic001G194900 Sobic008G160700--Sobic010G078100 Sobic007G130600 Sobic007G130600 Sobic008G160700--Sobic007G130600 Sobic009G235900 Sobic009G235900 Sobic008G160700--Sobic009G235900 Sobic008G160700--Sobic006G214500 Sobic006G124900 Sobic006G124900 Sobic008G160700--Sobic006G124900 Sobic008G160700--Sobic002G303000 Sobic009G027000 Sobic009G027000 Sobic008G160700--Sobic009G027000 Sobic010G078100--Sobic008G160700 Sobic010G078100--Sobic002G303000 Sobic010G078100--Sobic009G121100 Sobic010G078100--Sobic006G214500 Sobic010G078100--Sobic009G027000 Sobic001G359400 Sobic001G359400 Sobic010G078100--Sobic001G359400 Sobic001G373100 Sobic001G373100 Sobic010G078100--Sobic001G373100 Sobic006G122400 Sobic006G122400 Sobic010G078100--Sobic006G122400 Sobic010G078100--Sobic004G295800 Sobic001G156100--Sobic009G121100 Sobic001G156100--Sobic001G447500 Sobic001G156100--Sobic006G214500 Sobic002G152200 Sobic002G152200 Sobic001G156100--Sobic002G152200 Sobic001G156100--Sobic009G229800 Sobic001G156100--Sobic008G160700 Sobic001G156100--Sobic009G027000 Sobic001G156100--Sobic001G373200 Sobic001G156100--Sobic004G295800 Sobic003G407300--Sobic009G121100 Sobic003G407300--Sobic001G373200 Sobic003G407300--Sobic003G019100 Sobic003G407300--Sobic006G214500 Sobic001G507300 Sobic001G507300 Sobic003G407300--Sobic001G507300 Sobic003G407300--Sobic004G295800 Sobic003G407300--Sobic009G229800 Sobic003G407300--Sobic002G303000 Sobic007G024700 Sobic007G024700 Sobic003G407300--Sobic007G024700 Sobic001G447500--Sobic001G156100 Sobic001G447500--Sobic006G214500 Sobic003G329400 Sobic003G329400 Sobic001G447500--Sobic003G329400 Sobic003G148800 Sobic003G148800 Sobic001G447500--Sobic003G148800 Sobic008G062200 Sobic008G062200 Sobic001G447500--Sobic008G062200 Sobic007G219900 Sobic007G219900 Sobic001G447500--Sobic007G219900 Sobic001G447500--Sobic003G407300 Sobic001G447500--Sobic009G121100 Sobic001G447500--Sobic001G443900 Sobic009G249200--Sobic007G024700 Sobic001G409600 Sobic001G409600 Sobic009G249200--Sobic001G409600 Sobic006G237400 Sobic006G237400 Sobic009G249200--Sobic006G237400 Sobic009G249200--Sobic009G166300 Sobic009G249200--Sobic004G021100 Sobic010G205800 Sobic010G205800 Sobic009G249200--Sobic010G205800 Sobic009G249200--Sobic003G408500 Sobic002G315200 Sobic002G315200 Sobic009G249200--Sobic002G315200 Sobic009G027300 Sobic009G027300 Sobic009G249200--Sobic009G027300
Octagon: transcription factors


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