Gene annotation
Transcriptome id Sobic.001G373200.1
Synonym Sb01g035450
Functional annotation lipase precursor, putative, expressed
UniProt A0A1B6QN90
Pfam PF01764
Panther DB PTHR21493 PTHR21493:SF99
NCBI CDD KOG4569; Predicted lipase
KEGG Orthology -
Gene Ontology GO:0006629; lipid metabolic process


Orthologs (automatic annotation)
TAIR AT5G18640 : alpha/beta-Hydrolases superfamily protein
RAP-DB (Rice) LOC_Os07g47250.3 : lipase precursor, putative, expressed
MaizeGDB (Corn) Zm00025a002447 , Zm00025a049087
Brachypodium KQK14769 , KQK14768 , KQK21697
Barley HORVU2Hr1G023940.11 , HORVU2Hr1G023940.14 , HORVU2Hr1G023940.18 , HORVU2Hr1G023940.49 , HORVU2Hr1G023940.51 , HORVU2Hr1G023940.27 , HORVU2Hr1G023940.21 , HORVU2Hr1G023940.20 , HORVU2Hr1G023940.23 , HORVU2Hr1G023940.28 , HORVU2Hr1G023940.33 , HORVU2Hr1G023940.7 , HORVU2Hr1G023940.30 , HORVU2Hr1G023940.36 , HORVU2Hr1G023940.34 , HORVU2Hr1G023940.35 , HORVU2Hr1G023940.2 , HORVU2Hr1G023940.3 , HORVU2Hr1G023940.4 , HORVU2Hr1G023940.8 , HORVU2Hr1G023940.25 , HORVU2Hr1G023940.48 , HORVU2Hr1G023940.47 , HORVU2Hr1G023940.46 , HORVU2Hr1G023940.44 , HORVU2Hr1G023940.43 , HORVU2Hr1G023940.42 , HORVU2Hr1G023940.40
Wheat TraesCS2B02G160100 , TraesCS2B02G160100 , TraesCS2B02G137900 , TraesCS2D02G117100 , TraesCS2A02G136100 , TraesCS2A02G117900 , TraesCS2A02G117900 , TraesCS2A02G117900 , TraesCS2D02G138800 , TraesCS2D02G138800
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G407300 histidine kinase, putative, expressed K14489: arabidopsis histidine kinase 2/3/4 (cytokinin receptor)
2 Sobic.009G121100 expressed protein -
3 Sobic.003G019100 KIN, antigenic determinant of recA protein, putative, expressed K13102: DNA/RNA-binding protein KIN17
4 Sobic.004G295800 chaperone protein dnaJ, putative, expressed K09503: DnaJ homolog subfamily A member 2
5 Sobic.007G024700 serine/threonine protein phosphatase 2A 59 kDa regulatory subunit Bgamma isoform, putative, expressed K11584: serine/threonine-protein phosphatase 2A regulatory subunit B'
6 Sobic.006G214500 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@lecithine cholesterol acyltransferase, putative, expressed -
7 Sobic.002G179900 ABC transporter, ATP-binding protein, putative, expressed -
8 Sobic.001G156100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@aminotransferase, putative, expressed K00819: rocD, ornithine--oxo-acid transaminase
9 Sobic.009G249200 transmembrane protein, putative, expressed -
10 Sobic.008G191100 nodulin, putative, expressed -
11 Sobic.009G229800 Uncharacterized gene family(PubMedID : 29126242)@"Causal gene for dw1, a putative membrane protein of unknown function"(PubMedID : 26963094)@expressed protein -
12 Sobic.001G474700 expressed protein -
13 Sobic.001G443900 peptide transporter PTR2, putative, expressed -
14 Sobic.001G409600 KH domain containing protein, putative, expressed K13095: splicing factor 1
15 Sobic.002G427050 - -
16 Sobic.002G270500 UBX domain-containing protein, putative, expressed -
17 Sobic.002G009700 AMP-binding domain containing protein, expressed -
18 Sobic.001G290000 enoyl-CoA hydratase/isomerase family protein, putative, expressed K05605: 3-hydroxyisobutyryl-CoA hydrolase
19 Sobic.004G052900 biotin--protein ligase, putative, expressed K01942: biotin---protein ligase
20 Sobic.001G427100 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@mitochondrial carrier protein, putative, expressed K13354: SLC25A17, solute carrier family 25 (peroxisomal adenine nucleotide transporter), member 17


Gene co-expression network
sample Sobic001G373200 Sobic001G373200 Sobic003G407300 Sobic003G407300 Sobic001G373200--Sobic003G407300 Sobic009G121100 Sobic009G121100 Sobic001G373200--Sobic009G121100 Sobic003G019100 Sobic003G019100 Sobic001G373200--Sobic003G019100 Sobic004G295800 Sobic004G295800 Sobic001G373200--Sobic004G295800 Sobic007G024700 Sobic007G024700 Sobic001G373200--Sobic007G024700 Sobic006G214500 Sobic006G214500 Sobic001G373200--Sobic006G214500 Sobic002G179900 Sobic002G179900 Sobic001G373200--Sobic002G179900 Sobic001G156100 Sobic001G156100 Sobic001G373200--Sobic001G156100 Sobic009G249200 Sobic009G249200 Sobic001G373200--Sobic009G249200 Sobic003G407300--Sobic009G121100 Sobic003G407300--Sobic001G373200 Sobic003G407300--Sobic003G019100 Sobic003G407300--Sobic006G214500 Sobic001G507300 Sobic001G507300 Sobic003G407300--Sobic001G507300 Sobic003G407300--Sobic004G295800 Sobic009G229800 Sobic009G229800 Sobic003G407300--Sobic009G229800 Sobic002G303000 Sobic002G303000 Sobic003G407300--Sobic002G303000 Sobic003G407300--Sobic007G024700 Sobic009G121100--Sobic006G214500 Sobic009G121100--Sobic003G407300 Sobic009G121100--Sobic003G019100 Sobic009G121100--Sobic001G156100 Sobic001G443900 Sobic001G443900 Sobic009G121100--Sobic001G443900 Sobic009G121100--Sobic001G373200 Sobic010G078100 Sobic010G078100 Sobic009G121100--Sobic010G078100 Sobic009G121100--Sobic004G295800 Sobic009G121100--Sobic002G303000 Sobic003G019100--Sobic009G121100 Sobic003G019100--Sobic001G373200 Sobic003G019100--Sobic003G407300 Sobic003G019100--Sobic004G295800 Sobic004G021100 Sobic004G021100 Sobic003G019100--Sobic004G021100 Sobic003G019100--Sobic006G214500 Sobic003G019100--Sobic009G249200 Sobic001G290000 Sobic001G290000 Sobic003G019100--Sobic001G290000 Sobic001G409600 Sobic001G409600 Sobic003G019100--Sobic001G409600 Sobic008G191100 Sobic008G191100 Sobic004G295800--Sobic008G191100 Sobic002G132000 Sobic002G132000 Sobic004G295800--Sobic002G132000 Sobic004G295800--Sobic007G024700 Sobic004G295800--Sobic009G121100 Sobic004G006200 Sobic004G006200 Sobic004G295800--Sobic004G006200 Sobic004G295800--Sobic004G021100 Sobic004G295800--Sobic001G373200 Sobic004G295800--Sobic003G407300 Sobic004G295800--Sobic001G290000 Sobic002G270500 Sobic002G270500 Sobic007G024700--Sobic002G270500 Sobic009G094300 Sobic009G094300 Sobic007G024700--Sobic009G094300 Sobic007G024700--Sobic009G249200 Sobic004G052900 Sobic004G052900 Sobic007G024700--Sobic004G052900 Sobic001G270400 Sobic001G270400 Sobic007G024700--Sobic001G270400 Sobic004G264400 Sobic004G264400 Sobic007G024700--Sobic004G264400 Sobic003G305200 Sobic003G305200 Sobic007G024700--Sobic003G305200 Sobic007G024700--Sobic002G132000 Sobic002G419800 Sobic002G419800 Sobic007G024700--Sobic002G419800 Sobic006G214500--Sobic009G121100 Sobic006G214500--Sobic001G443900 Sobic003G408500 Sobic003G408500 Sobic006G214500--Sobic003G408500 Sobic008G160700 Sobic008G160700 Sobic006G214500--Sobic008G160700 Sobic006G214500--Sobic010G078100 Sobic006G214500--Sobic001G156100 Sobic006G214500--Sobic003G407300 Sobic001G447500 Sobic001G447500 Sobic006G214500--Sobic001G447500 Sobic006G214500--Sobic009G249200 Sobic009G010600 Sobic009G010600 Sobic002G179900--Sobic009G010600 SobicK042000 SobicK042000 Sobic002G179900--SobicK042000 Sobic002G179900--Sobic007G024700 Sobic002G179900--Sobic009G249200 Sobic002G179900--Sobic004G052900 Sobic004G113400 Sobic004G113400 Sobic002G179900--Sobic004G113400 Sobic006G245400 Sobic006G245400 Sobic002G179900--Sobic006G245400 Sobic007G172400 Sobic007G172400 Sobic002G179900--Sobic007G172400 Sobic002G315200 Sobic002G315200 Sobic002G179900--Sobic002G315200 Sobic001G156100--Sobic009G121100 Sobic001G156100--Sobic001G447500 Sobic001G156100--Sobic006G214500 Sobic002G152200 Sobic002G152200 Sobic001G156100--Sobic002G152200 Sobic001G156100--Sobic009G229800 Sobic001G156100--Sobic008G160700 Sobic009G027000 Sobic009G027000 Sobic001G156100--Sobic009G027000 Sobic001G156100--Sobic001G373200 Sobic001G156100--Sobic004G295800 Sobic009G249200--Sobic007G024700 Sobic009G249200--Sobic001G409600 Sobic006G237400 Sobic006G237400 Sobic009G249200--Sobic006G237400 Sobic009G166300 Sobic009G166300 Sobic009G249200--Sobic009G166300 Sobic009G249200--Sobic004G021100 Sobic010G205800 Sobic010G205800 Sobic009G249200--Sobic010G205800 Sobic009G249200--Sobic003G408500 Sobic009G249200--Sobic002G315200 Sobic009G027300 Sobic009G027300 Sobic009G249200--Sobic009G027300
Octagon: transcription factors


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