Gene annotation
Transcriptome id Sobic.001G474700.1
Synonym Sb01g044490
Functional annotation expressed protein
UniProt C5WUT1
Pfam -
Panther DB PTHR12459 PTHR12459:SF6
NCBI CDD KOG1398; Uncharacterized conserved protein
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G34630 : -
RAP-DB (Rice) LOC_Os03g09090.1 : expressed protein
MaizeGDB (Corn) Zm00025a001040
Brachypodium PNT77998 , PNT77997 , KQK23190 , KQK23189
Barley HORVU4Hr1G078610.1 , HORVU4Hr1G078610.2 , HORVU4Hr1G078610.3 , HORVU4Hr1G078610.5 , HORVU4Hr1G078610.6 , HORVU4Hr1G078610.7
Wheat TraesCS4B02G306200 , TraesCS4A02G406900 , TraesCS4D02G304400
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G126900 mitochondrial carrier protein, putative, expressed -
2 Sobic.001G427100 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@mitochondrial carrier protein, putative, expressed K13354: SLC25A17, solute carrier family 25 (peroxisomal adenine nucleotide transporter), member 17
3 Sobic.001G373200 lipase precursor, putative, expressed -
4 Sobic.003G195500 SEY1, putative, expressed -
5 Sobic.003G005600 ubiquitin conjugating enzyme protein, putative, expressed K10581: ubiquitin-conjugating enzyme E2 O
6 Sobic.004G295800 chaperone protein dnaJ, putative, expressed K09503: DnaJ homolog subfamily A member 2
7 Sobic.003G036800 WD domain, G-beta repeat domain containing protein, expressed K10260: FBXW7, F-box and WD-40 domain protein 7
8 Sobic.007G024700 serine/threonine protein phosphatase 2A 59 kDa regulatory subunit Bgamma isoform, putative, expressed K11584: serine/threonine-protein phosphatase 2A regulatory subunit B'
9 Sobic.002G132000 serine/threonine-protein kinase AFC2, putative, expressed K08287: dual-specificity kinase
10 Sobic.010G064700 two-component response regulator, putative, expressed K14491: two-component response regulator ARR-B family
11 Sobic.001G440600 expressed protein -
12 Sobic.008G110600 expressed protein -
13 Sobic.004G269200 protein kinase, putative, expressed K18670: dual specificity protein kinase YAK1
14 Sobic.002G427050 - -
15 Sobic.008G093000 ABC transporter, ATP-binding protein, putative, expressed K06185: ATP-binding cassette, subfamily F, member 2
16 Sobic.002G424000 transcription factor, putative, expressed K14431: transcription factor TGA
17 Sobic.001G408200 Candidate orthologue to the genomic region of wheat Hessian fy resistance gene H32(PubMedID : 28624908)@CAMK_KIN1/SNF1/Nim1_like_AMPKh.4 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K07198: PRKAA, 5'-AMP-activated protein kinase, catalytic alpha subunit
18 Sobic.007G060201 - -
19 Sobic.001G224600 peroxisome assembly protein 12, putative, expressed K13345: PEX12, peroxin-12
20 Sobic.003G109100 decarboxylase, putative, expressed K01634: SGPL1, sphinganine-1-phosphate aldolase


Gene co-expression network
sample Sobic001G474700 Sobic001G474700 Sobic009G126900 Sobic009G126900 Sobic001G474700--Sobic009G126900 Sobic001G427100 Sobic001G427100 Sobic001G474700--Sobic001G427100 Sobic001G373200 Sobic001G373200 Sobic001G474700--Sobic001G373200 Sobic003G195500 Sobic003G195500 Sobic001G474700--Sobic003G195500 Sobic003G005600 Sobic003G005600 Sobic001G474700--Sobic003G005600 Sobic004G295800 Sobic004G295800 Sobic001G474700--Sobic004G295800 Sobic003G036800 Sobic003G036800 Sobic001G474700--Sobic003G036800 Sobic007G024700 Sobic007G024700 Sobic001G474700--Sobic007G024700 Sobic002G132000 Sobic002G132000 Sobic001G474700--Sobic002G132000 Sobic010G043400 Sobic010G043400 Sobic009G126900--Sobic010G043400 Sobic002G270500 Sobic002G270500 Sobic009G126900--Sobic002G270500 Sobic002G009700 Sobic002G009700 Sobic009G126900--Sobic002G009700 Sobic006G271200 Sobic006G271200 Sobic009G126900--Sobic006G271200 Sobic001G003000 Sobic001G003000 Sobic009G126900--Sobic001G003000 Sobic004G124200 Sobic004G124200 Sobic009G126900--Sobic004G124200 Sobic009G126900--Sobic003G005600 Sobic003G329400 Sobic003G329400 Sobic009G126900--Sobic003G329400 Sobic004G101900 Sobic004G101900 Sobic009G126900--Sobic004G101900 Sobic003G305200 Sobic003G305200 Sobic001G427100--Sobic003G305200 Sobic009G121100 Sobic009G121100 Sobic001G427100--Sobic009G121100 Sobic001G427100--Sobic001G474700 Sobic001G427100--Sobic004G295800 Sobic001G156100 Sobic001G156100 Sobic001G427100--Sobic001G156100 Sobic001G427100--Sobic009G126900 Sobic001G427100--Sobic003G005600 Sobic001G427100--Sobic003G329400 Sobic001G427100--Sobic001G373200 Sobic003G407300 Sobic003G407300 Sobic001G373200--Sobic003G407300 Sobic001G373200--Sobic009G121100 Sobic003G019100 Sobic003G019100 Sobic001G373200--Sobic003G019100 Sobic001G373200--Sobic004G295800 Sobic001G373200--Sobic007G024700 Sobic006G214500 Sobic006G214500 Sobic001G373200--Sobic006G214500 Sobic002G179900 Sobic002G179900 Sobic001G373200--Sobic002G179900 Sobic001G373200--Sobic001G156100 Sobic009G249200 Sobic009G249200 Sobic001G373200--Sobic009G249200 Sobic001G065000 Sobic001G065000 Sobic003G195500--Sobic001G065000 Sobic006G012500 Sobic006G012500 Sobic003G195500--Sobic006G012500 Sobic001G534800 Sobic001G534800 Sobic003G195500--Sobic001G534800 Sobic004G039600 Sobic004G039600 Sobic003G195500--Sobic004G039600 Sobic004G178200 Sobic004G178200 Sobic003G195500--Sobic004G178200 Sobic001G281100 Sobic001G281100 Sobic003G195500--Sobic001G281100 Sobic004G146500 Sobic004G146500 Sobic003G195500--Sobic004G146500 Sobic007G119200 Sobic007G119200 Sobic003G195500--Sobic007G119200 Sobic006G131000 Sobic006G131000 Sobic003G195500--Sobic006G131000 Sobic003G005600--Sobic009G126900 Sobic002G304000 Sobic002G304000 Sobic003G005600--Sobic002G304000 Sobic003G005600--Sobic001G003000 Sobic003G005600--Sobic003G329400 Sobic003G005600--Sobic006G271200 Sobic003G005600--Sobic004G101900 Sobic008G062200 Sobic008G062200 Sobic003G005600--Sobic008G062200 Sobic003G005600--Sobic010G043400 Sobic010G064700 Sobic010G064700 Sobic003G005600--Sobic010G064700 Sobic008G191100 Sobic008G191100 Sobic004G295800--Sobic008G191100 Sobic004G295800--Sobic002G132000 Sobic004G295800--Sobic007G024700 Sobic004G295800--Sobic009G121100 Sobic004G006200 Sobic004G006200 Sobic004G295800--Sobic004G006200 Sobic004G021100 Sobic004G021100 Sobic004G295800--Sobic004G021100 Sobic004G295800--Sobic001G373200 Sobic004G295800--Sobic003G407300 Sobic001G290000 Sobic001G290000 Sobic004G295800--Sobic001G290000 Sobic003G036800--Sobic001G281100 Sobic004G269200 Sobic004G269200 Sobic003G036800--Sobic004G269200 Sobic004G261600 Sobic004G261600 Sobic003G036800--Sobic004G261600 Sobic004G002400 Sobic004G002400 Sobic003G036800--Sobic004G002400 Sobic004G004200 Sobic004G004200 Sobic003G036800--Sobic004G004200 Sobic007G060201 Sobic007G060201 Sobic003G036800--Sobic007G060201 Sobic003G036800--Sobic003G195500 Sobic010G072800 Sobic010G072800 Sobic003G036800--Sobic010G072800 Sobic001G251200 Sobic001G251200 Sobic003G036800--Sobic001G251200 Sobic007G024700--Sobic002G270500 Sobic009G094300 Sobic009G094300 Sobic007G024700--Sobic009G094300 Sobic007G024700--Sobic009G249200 Sobic004G052900 Sobic004G052900 Sobic007G024700--Sobic004G052900 Sobic001G270400 Sobic001G270400 Sobic007G024700--Sobic001G270400 Sobic004G264400 Sobic004G264400 Sobic007G024700--Sobic004G264400 Sobic007G024700--Sobic003G305200 Sobic007G024700--Sobic002G132000 Sobic002G419800 Sobic002G419800 Sobic007G024700--Sobic002G419800 Sobic002G132000--Sobic004G006200 Sobic002G132000--Sobic004G264400 Sobic002G132000--Sobic007G024700 Sobic002G132000--Sobic004G295800 Sobic001G109800 Sobic001G109800 Sobic002G132000--Sobic001G109800 Sobic002G132000--Sobic001G290000 Sobic009G113000 Sobic009G113000 Sobic002G132000--Sobic009G113000 Sobic002G132000--Sobic003G305200 Sobic001G137100 Sobic001G137100 Sobic002G132000--Sobic001G137100
Octagon: transcription factors


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