Gene annotation
Transcriptome id Sobic.003G036800.1,Sobic.003G036800.2,Sobic.003G036800.4,Sobic.003G036800.3
Synonym Sb03g003290
Functional annotation WD domain, G-beta repeat domain containing protein, expressed
UniProt A0A1W0VVM0 , C5XM06 , A0A1W0VVJ8
Pfam PF00400
Panther DB PTHR22844 PTHR22844:SF178
NCBI CDD KOG0279; G protein beta subunit-like protein
KEGG Orthology K10260; FBXW7, F-box and WD-40 domain protein 7
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT5G51980 : Transducin/WD40 repeat-like superfamily protein
RAP-DB (Rice) LOC_Os01g09252.1 : WD domain, G-beta repeat domain containing protein, expressed
MaizeGDB (Corn) Zm00025a023069
Brachypodium KQK03095 , PNT70104
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G281100 START domain containing protein, expressed -
2 Sobic.004G269200 protein kinase, putative, expressed K18670: dual specificity protein kinase YAK1
3 Sobic.004G261600 expressed protein -
4 Sobic.004G002400 expressed protein -
5 Sobic.004G004200 expressed protein -
6 Sobic.007G060201 - -
7 Sobic.003G195500 SEY1, putative, expressed -
8 Sobic.010G072800 exportin-7-A, putative, expressed K18460: XPO7, exportin-7
9 Sobic.001G251200 phospholipid-transporting ATPase, putative, expressed K14802: DRS2, phospholipid-transporting ATPase
10 Sobic.001G065000 expressed protein -
11 Sobic.010G278200 expressed protein -
12 Sobic.004G228800 LMBR1 integral membrane protein, putative, expressed -
13 Sobic.007G119200 intracellular protein transport protein USO1-related, putative, expressed -
14 Sobic.001G474700 expressed protein -
15 Sobic.008G123500 auxilin, putative, expressed -
16 Sobic.008G110600 expressed protein -
17 Sobic.007G047700 no apical meristem protein, putative, expressed -
18 Sobic.009G020900 "Ca ATPase, IIB type"(PubMedID : 22196357)@calcium-transporting ATPase, endoplasmic reticulum-type, putative, expressed K01537: P-type Ca2+ transporter type 2C
19 Sobic.004G002100 G-protein alpha subunit, putative, expressed -
20 Sobic.004G351100 signal peptide peptidase-like 2B, putative, expressed K09597: signal peptide peptidase-like 2B


Gene co-expression network
sample Sobic003G036800 Sobic003G036800 Sobic001G281100 Sobic001G281100 Sobic003G036800--Sobic001G281100 Sobic004G269200 Sobic004G269200 Sobic003G036800--Sobic004G269200 Sobic004G261600 Sobic004G261600 Sobic003G036800--Sobic004G261600 Sobic004G002400 Sobic004G002400 Sobic003G036800--Sobic004G002400 Sobic004G004200 Sobic004G004200 Sobic003G036800--Sobic004G004200 Sobic007G060201 Sobic007G060201 Sobic003G036800--Sobic007G060201 Sobic003G195500 Sobic003G195500 Sobic003G036800--Sobic003G195500 Sobic010G072800 Sobic010G072800 Sobic003G036800--Sobic010G072800 Sobic001G251200 Sobic001G251200 Sobic003G036800--Sobic001G251200 Sobic001G534800 Sobic001G534800 Sobic001G281100--Sobic001G534800 Sobic004G004300 Sobic004G004300 Sobic001G281100--Sobic004G004300 Sobic001G065000 Sobic001G065000 Sobic001G281100--Sobic001G065000 Sobic005G026200 Sobic005G026200 Sobic001G281100--Sobic005G026200 Sobic008G099800 Sobic008G099800 Sobic001G281100--Sobic008G099800 Sobic003G229500 Sobic003G229500 Sobic001G281100--Sobic003G229500 Sobic006G012500 Sobic006G012500 Sobic001G281100--Sobic006G012500 Sobic004G072100 Sobic004G072100 Sobic001G281100--Sobic004G072100 Sobic010G275500 Sobic010G275500 Sobic001G281100--Sobic010G275500 Sobic009G027300 Sobic009G027300 Sobic004G269200--Sobic009G027300 Sobic001G050200 Sobic001G050200 Sobic004G269200--Sobic001G050200 Sobic004G269200--Sobic001G281100 Sobic004G329400 Sobic004G329400 Sobic004G269200--Sobic004G329400 Sobic004G331100 Sobic004G331100 Sobic004G269200--Sobic004G331100 Sobic003G101400 Sobic003G101400 Sobic004G269200--Sobic003G101400 Sobic004G269200--Sobic004G004300 Sobic005G157000 Sobic005G157000 Sobic004G269200--Sobic005G157000 Sobic004G269200--Sobic001G534800 Sobic004G228800 Sobic004G228800 Sobic004G261600--Sobic004G228800 Sobic006G126100 Sobic006G126100 Sobic004G261600--Sobic006G126100 Sobic003G209200 Sobic003G209200 Sobic004G261600--Sobic003G209200 Sobic003G104000 Sobic003G104000 Sobic004G261600--Sobic003G104000 Sobic007G005500 Sobic007G005500 Sobic004G261600--Sobic007G005500 Sobic004G261600--Sobic001G251200 Sobic001G415300 Sobic001G415300 Sobic004G261600--Sobic001G415300 Sobic004G261600--Sobic004G004300 Sobic004G261600--Sobic008G099800 Sobic004G002400--Sobic001G281100 Sobic004G039600 Sobic004G039600 Sobic004G002400--Sobic004G039600 Sobic003G187500 Sobic003G187500 Sobic004G002400--Sobic003G187500 Sobic007G132100 Sobic007G132100 Sobic004G002400--Sobic007G132100 Sobic004G002400--Sobic006G126100 Sobic001G124200 Sobic001G124200 Sobic004G002400--Sobic001G124200 Sobic001G466700 Sobic001G466700 Sobic004G002400--Sobic001G466700 Sobic009G249200 Sobic009G249200 Sobic004G002400--Sobic009G249200 Sobic004G002400--Sobic001G534800 Sobic004G004200--Sobic004G004300 Sobic004G004200--Sobic001G281100 Sobic002G430000 Sobic002G430000 Sobic004G004200--Sobic002G430000 Sobic004G004200--Sobic004G269200 Sobic001G101100 Sobic001G101100 Sobic004G004200--Sobic001G101100 Sobic004G004200--Sobic001G251200 Sobic004G004200--Sobic004G261600 Sobic002G270500 Sobic002G270500 Sobic004G004200--Sobic002G270500 Sobic003G126300 Sobic003G126300 Sobic004G004200--Sobic003G126300 Sobic007G060201--Sobic001G281100 Sobic004G277200 Sobic004G277200 Sobic007G060201--Sobic004G277200 Sobic001G207400 Sobic001G207400 Sobic007G060201--Sobic001G207400 Sobic007G060201--Sobic004G269200 Sobic008G087866 Sobic008G087866 Sobic007G060201--Sobic008G087866 Sobic010G118950 Sobic010G118950 Sobic007G060201--Sobic010G118950 Sobic007G060201--Sobic001G050200 Sobic004G135400 Sobic004G135400 Sobic007G060201--Sobic004G135400 Sobic002G045600 Sobic002G045600 Sobic007G060201--Sobic002G045600 Sobic003G195500--Sobic001G065000 Sobic003G195500--Sobic006G012500 Sobic003G195500--Sobic001G534800 Sobic003G195500--Sobic004G039600 Sobic004G178200 Sobic004G178200 Sobic003G195500--Sobic004G178200 Sobic003G195500--Sobic001G281100 Sobic004G146500 Sobic004G146500 Sobic003G195500--Sobic004G146500 Sobic007G119200 Sobic007G119200 Sobic003G195500--Sobic007G119200 Sobic006G131000 Sobic006G131000 Sobic003G195500--Sobic006G131000 Sobic001G375600 Sobic001G375600 Sobic010G072800--Sobic001G375600 Sobic006G271200 Sobic006G271200 Sobic010G072800--Sobic006G271200 Sobic010G072800--Sobic002G430000 Sobic010G072800--Sobic001G207400 Sobic004G209800 Sobic004G209800 Sobic010G072800--Sobic004G209800 Sobic003G089000 Sobic003G089000 Sobic010G072800--Sobic003G089000 Sobic010G072800--Sobic007G060201 Sobic006G204900 Sobic006G204900 Sobic010G072800--Sobic006G204900 Sobic010G072800--Sobic004G269200 Sobic003G362600 Sobic003G362600 Sobic001G251200--Sobic003G362600 Sobic001G128300 Sobic001G128300 Sobic001G251200--Sobic001G128300 Sobic009G165700 Sobic009G165700 Sobic001G251200--Sobic009G165700 Sobic001G251200--Sobic004G004300 Sobic001G251200--Sobic004G261600 Sobic001G451400 Sobic001G451400 Sobic001G251200--Sobic001G451400 Sobic001G043100 Sobic001G043100 Sobic001G251200--Sobic001G043100 Sobic001G251200--Sobic006G131000 Sobic001G251200--Sobic001G281100
Octagon: transcription factors


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