Gene annotation
Transcriptome id Sobic.001G251200.1
Synonym ALA3, Sb01g022190
Functional annotation phospholipid-transporting ATPase, putative, expressed
UniProt A0A1B6QKW3
Pfam PF00122 PF12710 PF16209 PF16212
Panther DB PTHR24092 PTHR24092:SF85
NCBI CDD -
KEGG Orthology K14802; DRS2, phospholipid-transporting ATPase
Gene Ontology GO:0000166; nucleotide binding GO:0016021integral component of membrane GO:0015914phospholipid transport GO:0005524ATP binding GO:0000287magnesium ion binding


Orthologs (automatic annotation)
TAIR AT1G59820 : aminophospholipid ATPase 3
RAP-DB (Rice) LOC_Os05g01030.1 : phospholipid-transporting ATPase, putative, expressed
MaizeGDB (Corn) Zm00025a024138 , Zm00025a017798 , Zm00025a006975
Brachypodium KQK03916 , PNT67376 , KQJ96663
Barley HORVU1Hr1G032310.10 , HORVU1Hr1G032310.11 , HORVU1Hr1G032310.12 , HORVU1Hr1G032310.13 , HORVU1Hr1G032310.14 , HORVU1Hr1G032310.15 , HORVU1Hr1G032310.2 , HORVU1Hr1G032310.3 , HORVU1Hr1G032310.1 , HORVU1Hr1G032310.6 , HORVU1Hr1G032310.7 , HORVU1Hr1G032310.4 , HORVU1Hr1G032310.5 , HORVU1Hr1G032310.8 , HORVU1Hr1G032310.9 , HORVU1Hr1G032310.16 , HORVU1Hr1G032310.17
Wheat TraesCS1A02G132600 , TraesCS1A02G132600 , TraesCS1A02G132600 , TraesCS1A02G132600 , TraesCS1A02G132600 , TraesCS1D02G135500 , TraesCS1D02G135500 , TraesCS1D02G135500 , TraesCS1D02G135500 , TraesCS1B02G154200 , TraesCS1B02G154200 , TraesCS1B02G154200 , TraesCS1B02G154200 , TraesCS1B02G154200 , TraesCS1B02G154200 , TraesCS1B02G154200 , TraesCS1B02G154200 , TraesCS1B02G154200
Populus -


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cDNA sequences
Sobic.001G251200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G362600 AT hook motif family protein, expressed K15200: general transcription factor 3C polypeptide 2
2 Sobic.001G128300 chloride channel protein CLC-d, putative, expressed K05016: chloride channel 7
3 Sobic.009G165700 SAC3/GANP family protein, putative, expressed -
4 Sobic.004G004300 expressed protein -
5 Sobic.004G261600 expressed protein -
6 Sobic.001G451400 HEAT repeat family protein, putative, expressed K15305: VAC14, vacuole morphology and inheritance protein 14
7 Sobic.001G043100 EMB1745, putative, expressed K18723: nucleoporin GLE1
8 Sobic.006G131000 expressed protein K11968: ariadne-1
9 Sobic.001G281100 START domain containing protein, expressed -
10 Sobic.008G087866 - -
11 Sobic.001G441400 transcription factor, putative, expressed K09060: plant G-box-binding factor
12 Sobic.003G093800 - K03254: translation initiation factor 3 subunit A
13 Sobic.004G004200 expressed protein -
14 Sobic.005G087900 non-lysosomal glucosylceramidase, putative, expressed K17108: non-lysosomal glucosylceramidase
15 Sobic.007G180600 UBX domain-containing protein, putative, expressed -
16 Sobic.004G351100 signal peptide peptidase-like 2B, putative, expressed K09597: signal peptide peptidase-like 2B
17 Sobic.004G358400 callose synthase-like enzyme(PubMedID : 25311645)@1,3-beta-glucan synthase component domain containing protein, expressed K11000: callose synthase
18 Sobic.003G104000 expressed protein K15133: mediator of RNA polymerase II transcription subunit 17
19 Sobic.004G091100 nuclear protein ZAP-related, putative, expressed K17602: YLP motif-containing protein 1
20 Sobic.007G172200 inositol or phosphatidylinositol phosphatase/ phosphoric monoester hydrolase, putative, expressed K18081: myotubularin-related protein 1/2


Gene co-expression network
sample Sobic001G251200 Sobic001G251200 Sobic003G362600 Sobic003G362600 Sobic001G251200--Sobic003G362600 Sobic001G128300 Sobic001G128300 Sobic001G251200--Sobic001G128300 Sobic009G165700 Sobic009G165700 Sobic001G251200--Sobic009G165700 Sobic004G004300 Sobic004G004300 Sobic001G251200--Sobic004G004300 Sobic004G261600 Sobic004G261600 Sobic001G251200--Sobic004G261600 Sobic001G451400 Sobic001G451400 Sobic001G251200--Sobic001G451400 Sobic001G043100 Sobic001G043100 Sobic001G251200--Sobic001G043100 Sobic006G131000 Sobic006G131000 Sobic001G251200--Sobic006G131000 Sobic001G281100 Sobic001G281100 Sobic001G251200--Sobic001G281100 Sobic003G362600--Sobic009G165700 Sobic003G362600--Sobic001G251200 Sobic003G166750 Sobic003G166750 Sobic003G362600--Sobic003G166750 Sobic002G211800 Sobic002G211800 Sobic003G362600--Sobic002G211800 Sobic008G087866 Sobic008G087866 Sobic003G362600--Sobic008G087866 Sobic004G023000 Sobic004G023000 Sobic003G362600--Sobic004G023000 Sobic003G093800 Sobic003G093800 Sobic003G362600--Sobic003G093800 Sobic004G091100 Sobic004G091100 Sobic003G362600--Sobic004G091100 Sobic001G441400 Sobic001G441400 Sobic003G362600--Sobic001G441400 Sobic001G128300--Sobic009G165700 Sobic001G128300--Sobic001G451400 Sobic001G128300--Sobic001G251200 Sobic001G128300--Sobic004G091100 Sobic001G128300--Sobic001G043100 Sobic009G109925 Sobic009G109925 Sobic001G128300--Sobic009G109925 Sobic003G198800 Sobic003G198800 Sobic001G128300--Sobic003G198800 Sobic001G128300--Sobic001G441400 Sobic001G128300--Sobic002G211800 Sobic003G422500 Sobic003G422500 Sobic009G165700--Sobic003G422500 Sobic010G247800 Sobic010G247800 Sobic009G165700--Sobic010G247800 Sobic010G206900 Sobic010G206900 Sobic009G165700--Sobic010G206900 Sobic009G165700--Sobic003G166750 Sobic009G165700--Sobic008G087866 Sobic009G165700--Sobic001G451400 Sobic003G170900 Sobic003G170900 Sobic009G165700--Sobic003G170900 Sobic001G534700 Sobic001G534700 Sobic009G165700--Sobic001G534700 Sobic008G001200 Sobic008G001200 Sobic009G165700--Sobic008G001200 Sobic004G004300--Sobic001G281100 Sobic005G026200 Sobic005G026200 Sobic004G004300--Sobic005G026200 Sobic001G534800 Sobic001G534800 Sobic004G004300--Sobic001G534800 Sobic006G126100 Sobic006G126100 Sobic004G004300--Sobic006G126100 Sobic001G117200 Sobic001G117200 Sobic004G004300--Sobic001G117200 Sobic004G004200 Sobic004G004200 Sobic004G004300--Sobic004G004200 Sobic001G415300 Sobic001G415300 Sobic004G004300--Sobic001G415300 Sobic010G275500 Sobic010G275500 Sobic004G004300--Sobic010G275500 Sobic005G003300 Sobic005G003300 Sobic004G004300--Sobic005G003300 Sobic004G228800 Sobic004G228800 Sobic004G261600--Sobic004G228800 Sobic004G261600--Sobic006G126100 Sobic003G209200 Sobic003G209200 Sobic004G261600--Sobic003G209200 Sobic003G104000 Sobic003G104000 Sobic004G261600--Sobic003G104000 Sobic007G005500 Sobic007G005500 Sobic004G261600--Sobic007G005500 Sobic004G261600--Sobic001G251200 Sobic004G261600--Sobic001G415300 Sobic004G261600--Sobic004G004300 Sobic008G099800 Sobic008G099800 Sobic004G261600--Sobic008G099800 Sobic007G008900 Sobic007G008900 Sobic001G451400--Sobic007G008900 Sobic001G451400--Sobic009G165700 Sobic001G451400--Sobic001G441400 Sobic001G389100 Sobic001G389100 Sobic001G451400--Sobic001G389100 Sobic001G451400--Sobic010G247800 Sobic003G404500 Sobic003G404500 Sobic001G451400--Sobic003G404500 Sobic010G226000 Sobic010G226000 Sobic001G451400--Sobic010G226000 Sobic005G027400 Sobic005G027400 Sobic001G451400--Sobic005G027400 Sobic001G451400--Sobic003G422500 Sobic001G043100--Sobic009G165700 Sobic001G043100--Sobic001G451400 Sobic001G043100--Sobic003G422500 Sobic001G043100--Sobic001G128300 Sobic003G196300 Sobic003G196300 Sobic001G043100--Sobic003G196300 Sobic003G101400 Sobic003G101400 Sobic001G043100--Sobic003G101400 Sobic001G043100--Sobic006G131000 Sobic001G043100--Sobic004G004300 Sobic001G043100--Sobic008G087866 Sobic007G218000 Sobic007G218000 Sobic006G131000--Sobic007G218000 Sobic007G132100 Sobic007G132100 Sobic006G131000--Sobic007G132100 Sobic006G163800 Sobic006G163800 Sobic006G131000--Sobic006G163800 Sobic004G039600 Sobic004G039600 Sobic006G131000--Sobic004G039600 Sobic001G096000 Sobic001G096000 Sobic006G131000--Sobic001G096000 Sobic006G174850 Sobic006G174850 Sobic006G131000--Sobic006G174850 Sobic006G131000--Sobic010G275500 Sobic001G369000 Sobic001G369000 Sobic006G131000--Sobic001G369000 Sobic004G178200 Sobic004G178200 Sobic006G131000--Sobic004G178200 Sobic001G281100--Sobic001G534800 Sobic001G281100--Sobic004G004300 Sobic001G065000 Sobic001G065000 Sobic001G281100--Sobic001G065000 Sobic001G281100--Sobic005G026200 Sobic001G281100--Sobic008G099800 Sobic003G229500 Sobic003G229500 Sobic001G281100--Sobic003G229500 Sobic006G012500 Sobic006G012500 Sobic001G281100--Sobic006G012500 Sobic004G072100 Sobic004G072100 Sobic001G281100--Sobic004G072100 Sobic001G281100--Sobic010G275500
Octagon: transcription factors


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