Gene annotation
Transcriptome id Sobic.005G087900.2,Sobic.005G087900.5,Sobic.005G087900.1
Synonym Sb05g007160
Functional annotation non-lysosomal glucosylceramidase, putative, expressed
UniProt A0A1B6PR30 , A0A1B6PR29
Pfam PF12215 PF04685
Panther DB PTHR12654 PTHR12654:SF3
NCBI CDD -
KEGG Orthology K17108; non-lysosomal glucosylceramidase
Gene Ontology GO:0016021; integral component of membrane GO:0006665sphingolipid metabolic process GO:0004348glucosylceramidase activity


Orthologs (automatic annotation)
TAIR AT5G49900 : Beta-glucosidase, GBA2 type family protein
RAP-DB (Rice) LOC_Os11g13810.1 : non-lysosomal glucosylceramidase, putative, expressed
MaizeGDB (Corn) Zm00025a029536
Brachypodium KQJ88808 , KQJ88809 , KQJ88807
Barley HORVU4Hr1G015450.3 , HORVU4Hr1G015450.2 , HORVU4Hr1G015450.1 , HORVU4Hr1G015450.7 , HORVU4Hr1G015450.6 , HORVU4Hr1G015450.5 , HORVU4Hr1G015450.4 , HORVU4Hr1G015450.9 , HORVU4Hr1G015450.8 , HORVU4Hr1G015450.13 , HORVU4Hr1G015450.12 , HORVU4Hr1G015450.11 , HORVU4Hr1G015450.10 , HORVU4Hr1G015450.17 , HORVU4Hr1G015450.16 , HORVU4Hr1G015450.15 , HORVU4Hr1G015450.14 , HORVU4Hr1G015450.19 , HORVU4Hr1G015450.18 , HORVU4Hr1G015450.28 , HORVU4Hr1G015450.22 , HORVU4Hr1G015450.23 , HORVU4Hr1G015450.20 , HORVU4Hr1G015450.21 , HORVU4Hr1G015450.26 , HORVU4Hr1G015450.27 , HORVU4Hr1G015450.24 , HORVU4Hr1G015450.25
Wheat TraesCS4A02G226400 , TraesCS4A02G226400 , TraesCS4B02G088800 , TraesCS4B02G088800 , TraesCS4B02G088800 , TraesCS4B02G088800 , TraesCS4B02G088800 , TraesCS4D02G087100 , TraesCS4D02G087100 , TraesCS4D02G087100 , TraesCS4D02G087100 , TraesCS4D02G087100
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G251200 phospholipid-transporting ATPase, putative, expressed K14802: DRS2, phospholipid-transporting ATPase
2 Sobic.003G036600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@myb-related transcription activator, putative, expressed -
3 Sobic.001G521500 callose synthase-like enzyme(PubMedID : 25311645)@1,3-beta-glucan synthase component domain containing protein, expressed K11000: callose synthase
4 Sobic.001G128300 chloride channel protein CLC-d, putative, expressed K05016: chloride channel 7
5 Sobic.002G229600 - -
6 Sobic.003G298600 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in leaf and root"(PubMedID : 20499123)@auxin response factor, putative, expressed -
7 Sobic.007G056600 expressed protein -
8 Sobic.003G362600 AT hook motif family protein, expressed K15200: general transcription factor 3C polypeptide 2
9 Sobic.001G399800 pentatricopeptide, putative, expressed -
10 Sobic.009G109925 - -
11 Sobic.003G194100 mitochondrial carrier protein, putative, expressed K15084: SLC25A16, GDA, solute carrier family 25 (mitochondrial carrier protein), member 16
12 Sobic.007G203300 CDK-activating kinase assembly factor MAT1 family protein, expressed K10842: CDK-activating kinase assembly factor MAT1
13 Sobic.001G522100 transporter, monovalent cation:proton antiporter-2 family, putative, expressed -
14 Sobic.006G033200 Sec1 family transport protein, putative, expressed K15292: STXBP1, syntaxin-binding protein 1
15 Sobic.007G180600 UBX domain-containing protein, putative, expressed -
16 Sobic.010G072500 - -
17 Sobic.003G264100 - K10843: ERCC3, DNA excision repair protein ERCC-3
18 Sobic.004G261600 expressed protein -
19 Sobic.003G126300 OsRhmbd2 - Putative Rhomboid homologue, expressed -
20 Sobic.005G150350 - -


Gene co-expression network
sample Sobic005G087900 Sobic005G087900 Sobic001G251200 Sobic001G251200 Sobic005G087900--Sobic001G251200 Sobic003G036600 Sobic003G036600 Sobic005G087900--Sobic003G036600 Sobic001G521500 Sobic001G521500 Sobic005G087900--Sobic001G521500 Sobic001G128300 Sobic001G128300 Sobic005G087900--Sobic001G128300 Sobic002G229600 Sobic002G229600 Sobic005G087900--Sobic002G229600 Sobic003G298600 Sobic003G298600 Sobic005G087900--Sobic003G298600 Sobic007G056600 Sobic007G056600 Sobic005G087900--Sobic007G056600 Sobic003G362600 Sobic003G362600 Sobic005G087900--Sobic003G362600 Sobic001G399800 Sobic001G399800 Sobic005G087900--Sobic001G399800 Sobic001G251200--Sobic003G362600 Sobic001G251200--Sobic001G128300 Sobic009G165700 Sobic009G165700 Sobic001G251200--Sobic009G165700 Sobic004G004300 Sobic004G004300 Sobic001G251200--Sobic004G004300 Sobic004G261600 Sobic004G261600 Sobic001G251200--Sobic004G261600 Sobic001G451400 Sobic001G451400 Sobic001G251200--Sobic001G451400 Sobic001G043100 Sobic001G043100 Sobic001G251200--Sobic001G043100 Sobic006G131000 Sobic006G131000 Sobic001G251200--Sobic006G131000 Sobic001G281100 Sobic001G281100 Sobic001G251200--Sobic001G281100 Sobic002G148700 Sobic002G148700 Sobic003G036600--Sobic002G148700 Sobic003G036600--Sobic005G087900 Sobic003G036600--Sobic001G521500 Sobic010G260300 Sobic010G260300 Sobic003G036600--Sobic010G260300 Sobic009G079300 Sobic009G079300 Sobic003G036600--Sobic009G079300 Sobic003G397500 Sobic003G397500 Sobic003G036600--Sobic003G397500 Sobic001G409300 Sobic001G409300 Sobic003G036600--Sobic001G409300 Sobic003G252400 Sobic003G252400 Sobic003G036600--Sobic003G252400 Sobic003G036600--Sobic002G229600 Sobic009G122325 Sobic009G122325 Sobic001G521500--Sobic009G122325 Sobic001G521500--Sobic003G252400 Sobic001G521500--Sobic003G036600 Sobic001G521500--Sobic005G087900 Sobic001G521500--Sobic003G397500 Sobic003G229000 Sobic003G229000 Sobic001G521500--Sobic003G229000 Sobic006G115300 Sobic006G115300 Sobic001G521500--Sobic006G115300 Sobic009G136100 Sobic009G136100 Sobic001G521500--Sobic009G136100 Sobic001G521500--Sobic002G229600 Sobic001G128300--Sobic009G165700 Sobic001G128300--Sobic001G451400 Sobic001G128300--Sobic001G251200 Sobic004G091100 Sobic004G091100 Sobic001G128300--Sobic004G091100 Sobic001G128300--Sobic001G043100 Sobic009G109925 Sobic009G109925 Sobic001G128300--Sobic009G109925 Sobic003G198800 Sobic003G198800 Sobic001G128300--Sobic003G198800 Sobic001G441400 Sobic001G441400 Sobic001G128300--Sobic001G441400 Sobic002G211800 Sobic002G211800 Sobic001G128300--Sobic002G211800 Sobic002G229600--Sobic003G252400 Sobic004G211301 Sobic004G211301 Sobic002G229600--Sobic004G211301 Sobic002G013900 Sobic002G013900 Sobic002G229600--Sobic002G013900 Sobic002G229600--Sobic003G397500 Sobic003G066900 Sobic003G066900 Sobic002G229600--Sobic003G066900 Sobic004G257350 Sobic004G257350 Sobic002G229600--Sobic004G257350 Sobic003G233900 Sobic003G233900 Sobic002G229600--Sobic003G233900 Sobic002G331450 Sobic002G331450 Sobic002G229600--Sobic002G331450 Sobic002G189000 Sobic002G189000 Sobic002G229600--Sobic002G189000 Sobic003G298600--Sobic005G087900 Sobic003G339700 Sobic003G339700 Sobic003G298600--Sobic003G339700 Sobic007G146400 Sobic007G146400 Sobic003G298600--Sobic007G146400 Sobic003G298600--Sobic002G211800 Sobic003G298600--Sobic003G362600 Sobic009G066900 Sobic009G066900 Sobic003G298600--Sobic009G066900 Sobic010G186700 Sobic010G186700 Sobic003G298600--Sobic010G186700 Sobic003G298600--Sobic001G251200 Sobic002G110300 Sobic002G110300 Sobic003G298600--Sobic002G110300 Sobic007G056600--Sobic004G261600 Sobic004G228800 Sobic004G228800 Sobic007G056600--Sobic004G228800 Sobic007G203300 Sobic007G203300 Sobic007G056600--Sobic007G203300 Sobic010G232600 Sobic010G232600 Sobic007G056600--Sobic010G232600 Sobic006G077300 Sobic006G077300 Sobic007G056600--Sobic006G077300 Sobic004G124500 Sobic004G124500 Sobic007G056600--Sobic004G124500 Sobic003G126300 Sobic003G126300 Sobic007G056600--Sobic003G126300 Sobic003G119700 Sobic003G119700 Sobic007G056600--Sobic003G119700 Sobic007G056600--Sobic001G251200 Sobic003G362600--Sobic009G165700 Sobic003G362600--Sobic001G251200 Sobic003G166750 Sobic003G166750 Sobic003G362600--Sobic003G166750 Sobic003G362600--Sobic002G211800 Sobic008G087866 Sobic008G087866 Sobic003G362600--Sobic008G087866 Sobic004G023000 Sobic004G023000 Sobic003G362600--Sobic004G023000 Sobic003G093800 Sobic003G093800 Sobic003G362600--Sobic003G093800 Sobic003G362600--Sobic004G091100 Sobic003G362600--Sobic001G441400 Sobic001G399800--Sobic001G251200 Sobic001G522100 Sobic001G522100 Sobic001G399800--Sobic001G522100 Sobic001G399800--Sobic004G261600 Sobic002G383600 Sobic002G383600 Sobic001G399800--Sobic002G383600 Sobic003G104000 Sobic003G104000 Sobic001G399800--Sobic003G104000 Sobic002G370200 Sobic002G370200 Sobic001G399800--Sobic002G370200 Sobic001G399800--Sobic001G128300 Sobic010G227100 Sobic010G227100 Sobic001G399800--Sobic010G227100 Sobic007G180600 Sobic007G180600 Sobic001G399800--Sobic007G180600
Octagon: transcription factors


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