Gene annotation
Transcriptome id Sobic.001G522100.2,Sobic.001G522100.1
Synonym Sb01g048670, ATKEA5, KEA5
Functional annotation transporter, monovalent cation:proton antiporter-2 family, putative, expressed
UniProt A0A1Z5SBL4 , C5WZZ9
Pfam PF00999
Panther DB PTHR16254 PTHR16254:SF9
NCBI CDD KOG1650; Predicted K+/H+-antiporter
KEGG Orthology -
Gene Ontology GO:0016021; integral component of membrane GO:0015299solute:proton antiporter activity GO:0006812cation transport


Orthologs (automatic annotation)
TAIR AT5G51710 : K+ efflux antiporter 5
RAP-DB (Rice) LOC_Os06g36590.1 : transporter, monovalent cation:proton antiporter-2 family, putative, expressed
MaizeGDB (Corn) Zm00025a000367
Brachypodium PNT78273 , KQK23867 , KQK23868
Barley HORVU4Hr1G082840.18 , HORVU4Hr1G082840.19 , HORVU4Hr1G082840.10 , HORVU4Hr1G082840.11 , HORVU4Hr1G082840.23 , HORVU4Hr1G082840.29 , HORVU4Hr1G082840.28 , HORVU4Hr1G082840.3 , HORVU4Hr1G082840.4 , HORVU4Hr1G082840.5 , HORVU4Hr1G082840.6 , HORVU4Hr1G082840.7 , HORVU4Hr1G082840.8 , HORVU4Hr1G082840.9
Wheat TraesCS4D02G317500 , TraesCS4D02G317500 , TraesCS4B02G321000 , TraesCS4B02G321000 , TraesCS4B02G321000 , TraesCS5A02G491100 , TraesCS5A02G491100
Populus -


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cDNA sequences
Sobic.001G522100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G028700 succinate dehydrogenase flavoprotein subunit,mitochondrial precursor, putative, expressed K00234: SDHA, succinate dehydrogenase (ubiquinone) flavoprotein subunit
2 Sobic.004G261600 expressed protein -
3 Sobic.001G399800 pentatricopeptide, putative, expressed -
4 Sobic.003G209200 serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B, putative, expressed K04354: serine/threonine-protein phosphatase 2A regulatory subunit B
5 Sobic.007G180600 UBX domain-containing protein, putative, expressed -
6 Sobic.001G251200 phospholipid-transporting ATPase, putative, expressed K14802: DRS2, phospholipid-transporting ATPase
7 Sobic.004G228800 LMBR1 integral membrane protein, putative, expressed -
8 Sobic.006G077300 expressed protein K17637: EXOC2, exocyst complex component 2
9 Sobic.007G005500 ECT protein, putative, expressed -
10 Sobic.006G034500 elongation factor Tu, putative, expressed K03267: ERF3, peptide chain release factor subunit 3
11 Sobic.006G131000 expressed protein K11968: ariadne-1
12 Sobic.010G072400 SAC domain containing protein, putative, expressed -
13 Sobic.003G264100 - K10843: ERCC3, DNA excision repair protein ERCC-3
14 Sobic.006G260500 expressed protein -
15 Sobic.003G194100 mitochondrial carrier protein, putative, expressed K15084: SLC25A16, GDA, solute carrier family 25 (mitochondrial carrier protein), member 16
16 Sobic.009G077600 glycosyl hydrolase family 47 domain contain protein, expressed K01230: MAN1A_C, mannosyl-oligosaccharide alpha-1,2-mannosidase
17 Sobic.004G323700 zinc finger family protein, putative, expressed -
18 Sobic.003G337300 HEAT repeat family protein, putative, expressed K08876: SCY1-like protein 1
19 Sobic.003G104000 expressed protein K15133: mediator of RNA polymerase II transcription subunit 17
20 Sobic.003G227100 adaptin, putative, expressed -


Gene co-expression network
sample Sobic001G522100 Sobic001G522100 Sobic002G028700 Sobic002G028700 Sobic001G522100--Sobic002G028700 Sobic004G261600 Sobic004G261600 Sobic001G522100--Sobic004G261600 Sobic001G399800 Sobic001G399800 Sobic001G522100--Sobic001G399800 Sobic003G209200 Sobic003G209200 Sobic001G522100--Sobic003G209200 Sobic007G180600 Sobic007G180600 Sobic001G522100--Sobic007G180600 Sobic001G251200 Sobic001G251200 Sobic001G522100--Sobic001G251200 Sobic004G228800 Sobic004G228800 Sobic001G522100--Sobic004G228800 Sobic006G077300 Sobic006G077300 Sobic001G522100--Sobic006G077300 Sobic007G005500 Sobic007G005500 Sobic001G522100--Sobic007G005500 Sobic002G028700--Sobic001G522100 Sobic004G100200 Sobic004G100200 Sobic002G028700--Sobic004G100200 Sobic002G028700--Sobic003G209200 Sobic009G077600 Sobic009G077600 Sobic002G028700--Sobic009G077600 Sobic007G075500 Sobic007G075500 Sobic002G028700--Sobic007G075500 Sobic003G346400 Sobic003G346400 Sobic002G028700--Sobic003G346400 Sobic002G028700--Sobic004G228800 Sobic006G260500 Sobic006G260500 Sobic002G028700--Sobic006G260500 Sobic002G028700--Sobic006G077300 Sobic004G261600--Sobic004G228800 Sobic006G126100 Sobic006G126100 Sobic004G261600--Sobic006G126100 Sobic004G261600--Sobic003G209200 Sobic003G104000 Sobic003G104000 Sobic004G261600--Sobic003G104000 Sobic004G261600--Sobic007G005500 Sobic004G261600--Sobic001G251200 Sobic001G415300 Sobic001G415300 Sobic004G261600--Sobic001G415300 Sobic004G004300 Sobic004G004300 Sobic004G261600--Sobic004G004300 Sobic008G099800 Sobic008G099800 Sobic004G261600--Sobic008G099800 Sobic001G399800--Sobic001G251200 Sobic001G399800--Sobic001G522100 Sobic001G399800--Sobic004G261600 Sobic002G383600 Sobic002G383600 Sobic001G399800--Sobic002G383600 Sobic001G399800--Sobic003G104000 Sobic002G370200 Sobic002G370200 Sobic001G399800--Sobic002G370200 Sobic001G128300 Sobic001G128300 Sobic001G399800--Sobic001G128300 Sobic010G227100 Sobic010G227100 Sobic001G399800--Sobic010G227100 Sobic001G399800--Sobic007G180600 Sobic003G209200--Sobic007G005500 Sobic003G209200--Sobic006G260500 Sobic003G209200--Sobic006G077300 Sobic006G021700 Sobic006G021700 Sobic003G209200--Sobic006G021700 Sobic005G062200 Sobic005G062200 Sobic003G209200--Sobic005G062200 Sobic004G241900 Sobic004G241900 Sobic003G209200--Sobic004G241900 Sobic003G209200--Sobic004G261600 Sobic005G110499 Sobic005G110499 Sobic003G209200--Sobic005G110499 Sobic003G209200--Sobic009G077600 Sobic007G180600--Sobic001G251200 Sobic007G180600--Sobic004G228800 Sobic006G131000 Sobic006G131000 Sobic007G180600--Sobic006G131000 Sobic008G185500 Sobic008G185500 Sobic007G180600--Sobic008G185500 Sobic001G477700 Sobic001G477700 Sobic007G180600--Sobic001G477700 Sobic007G180600--Sobic001G522100 Sobic007G180600--Sobic004G261600 Sobic007G042900 Sobic007G042900 Sobic007G180600--Sobic007G042900 Sobic004G257200 Sobic004G257200 Sobic007G180600--Sobic004G257200 Sobic003G362600 Sobic003G362600 Sobic001G251200--Sobic003G362600 Sobic001G251200--Sobic001G128300 Sobic009G165700 Sobic009G165700 Sobic001G251200--Sobic009G165700 Sobic001G251200--Sobic004G004300 Sobic001G251200--Sobic004G261600 Sobic001G451400 Sobic001G451400 Sobic001G251200--Sobic001G451400 Sobic001G043100 Sobic001G043100 Sobic001G251200--Sobic001G043100 Sobic001G251200--Sobic006G131000 Sobic001G281100 Sobic001G281100 Sobic001G251200--Sobic001G281100 Sobic004G228800--Sobic004G261600 Sobic010G261600 Sobic010G261600 Sobic004G228800--Sobic010G261600 Sobic004G323700 Sobic004G323700 Sobic004G228800--Sobic004G323700 Sobic010G278200 Sobic010G278200 Sobic004G228800--Sobic010G278200 Sobic004G236200 Sobic004G236200 Sobic004G228800--Sobic004G236200 Sobic004G228800--Sobic006G131000 Sobic005G177700 Sobic005G177700 Sobic004G228800--Sobic005G177700 Sobic007G056600 Sobic007G056600 Sobic004G228800--Sobic007G056600 Sobic003G126300 Sobic003G126300 Sobic004G228800--Sobic003G126300 Sobic006G077300--Sobic006G260500 Sobic006G077300--Sobic006G021700 Sobic006G077300--Sobic003G209200 Sobic001G056800 Sobic001G056800 Sobic006G077300--Sobic001G056800 Sobic002G401500 Sobic002G401500 Sobic006G077300--Sobic002G401500 Sobic003G114400 Sobic003G114400 Sobic006G077300--Sobic003G114400 Sobic006G077300--Sobic007G005500 Sobic006G077300--Sobic005G062200 Sobic002G042600 Sobic002G042600 Sobic006G077300--Sobic002G042600 Sobic007G005500--Sobic003G209200 Sobic007G005500--Sobic004G241900 Sobic007G005500--Sobic005G062200 Sobic007G005500--Sobic006G260500 Sobic007G005500--Sobic006G021700 Sobic010G169900 Sobic010G169900 Sobic007G005500--Sobic010G169900 Sobic010G000800 Sobic010G000800 Sobic007G005500--Sobic010G000800 Sobic007G005500--Sobic004G261600 Sobic007G005500--Sobic006G077300
Octagon: transcription factors


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