Gene annotation
Transcriptome id Sobic.003G194100.1
Synonym Sb03g025740
Functional annotation mitochondrial carrier protein, putative, expressed
UniProt C5XNR7
Pfam PF00153
Panther DB PTHR24089 PTHR24089:SF331
NCBI CDD KOG0752; Mitochondrial solute carrier protein
KEGG Orthology K15084; SLC25A16, GDA, solute carrier family 25 (mitochondrial carrier protein), member 16
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G14560 : Mitochondrial substrate carrier family protein
RAP-DB (Rice) LOC_Os01g38990.1 : mitochondrial carrier protein, putative, expressed
MaizeGDB (Corn) Zm00025a038405
Brachypodium KQK08372 , KQK08371
Barley HORVU3Hr1G049720.8 , HORVU3Hr1G049720.7 , HORVU3Hr1G049720.6 , HORVU3Hr1G049720.5 , HORVU3Hr1G049720.4 , HORVU3Hr1G049720.3 , HORVU3Hr1G049720.2 , HORVU3Hr1G049720.1
Wheat TraesCS3B02G238400 , TraesCS3A02G206300 , TraesCS3A02G206300 , TraesCS3D02G209300
Populus -


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cDNA sequences
Sobic.003G194100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G280000 transportin-2, putative, expressed K18752: TNPO1, IPO2, transportin-1
2 Sobic.003G104000 expressed protein K15133: mediator of RNA polymerase II transcription subunit 17
3 Sobic.007G005500 ECT protein, putative, expressed -
4 Sobic.004G145000 importin-8, putative, expressed -
5 Sobic.004G261600 expressed protein -
6 Sobic.002G256700 ubiquitin carboxyl-terminal hydrolase family protein, expressed K11844: ubiquitin carboxyl-terminal hydrolase 16/45
7 Sobic.004G322400 WD40-like, putative, expressed -
8 Sobic.003G209200 serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B, putative, expressed K04354: serine/threonine-protein phosphatase 2A regulatory subunit B
9 Sobic.003G337300 HEAT repeat family protein, putative, expressed K08876: SCY1-like protein 1
10 Sobic.010G004100 expressed protein -
11 Sobic.009G143700 no apical meristem protein, putative, expressed -
12 Sobic.001G431000 Sel1 repeat domain containing protein, putative, expressed K14026: SEL1, SEL1 protein
13 Sobic.001G404600 expressed protein K18270: Rab3 GTPase-activating protein catalytic subunit
14 Sobic.004G241900 OsDegp3 - Putative Deg protease homologue, expressed -
15 Sobic.006G166200 Alg9-like mannosyltransferase protein, putative, expressed K03847: alpha-1,6-mannosyltransferase
16 Sobic.008G135200 importin subunit beta, putative, expressed K14293: KPNB1, importin subunit beta-1
17 Sobic.003G227100 adaptin, putative, expressed -
18 Sobic.004G344901 - K10357: myosin V
19 Sobic.007G054800 valyl-tRNA synthetase, putative, expressed K01873: VARS, valyl-tRNA synthetase
20 Sobic.008G124800 expressed protein -


Gene co-expression network
sample Sobic003G194100 Sobic003G194100 Sobic006G280000 Sobic006G280000 Sobic003G194100--Sobic006G280000 Sobic003G104000 Sobic003G104000 Sobic003G194100--Sobic003G104000 Sobic007G005500 Sobic007G005500 Sobic003G194100--Sobic007G005500 Sobic004G145000 Sobic004G145000 Sobic003G194100--Sobic004G145000 Sobic004G261600 Sobic004G261600 Sobic003G194100--Sobic004G261600 Sobic002G256700 Sobic002G256700 Sobic003G194100--Sobic002G256700 Sobic004G322400 Sobic004G322400 Sobic003G194100--Sobic004G322400 Sobic003G209200 Sobic003G209200 Sobic003G194100--Sobic003G209200 Sobic003G337300 Sobic003G337300 Sobic003G194100--Sobic003G337300 Sobic007G054800 Sobic007G054800 Sobic006G280000--Sobic007G054800 Sobic001G542500 Sobic001G542500 Sobic006G280000--Sobic001G542500 Sobic004G004300 Sobic004G004300 Sobic006G280000--Sobic004G004300 Sobic006G280000--Sobic002G256700 Sobic006G280000--Sobic003G337300 Sobic001G089600 Sobic001G089600 Sobic006G280000--Sobic001G089600 Sobic006G280000--Sobic003G104000 Sobic001G287500 Sobic001G287500 Sobic006G280000--Sobic001G287500 Sobic001G117200 Sobic001G117200 Sobic006G280000--Sobic001G117200 Sobic003G104000--Sobic003G337300 Sobic003G104000--Sobic002G256700 Sobic006G126100 Sobic006G126100 Sobic003G104000--Sobic006G126100 Sobic001G251100 Sobic001G251100 Sobic003G104000--Sobic001G251100 Sobic002G142900 Sobic002G142900 Sobic003G104000--Sobic002G142900 Sobic002G295500 Sobic002G295500 Sobic003G104000--Sobic002G295500 Sobic004G277200 Sobic004G277200 Sobic003G104000--Sobic004G277200 Sobic004G131300 Sobic004G131300 Sobic003G104000--Sobic004G131300 Sobic006G261400 Sobic006G261400 Sobic003G104000--Sobic006G261400 Sobic007G005500--Sobic003G209200 Sobic004G241900 Sobic004G241900 Sobic007G005500--Sobic004G241900 Sobic005G062200 Sobic005G062200 Sobic007G005500--Sobic005G062200 Sobic006G260500 Sobic006G260500 Sobic007G005500--Sobic006G260500 Sobic006G021700 Sobic006G021700 Sobic007G005500--Sobic006G021700 Sobic010G169900 Sobic010G169900 Sobic007G005500--Sobic010G169900 Sobic010G000800 Sobic010G000800 Sobic007G005500--Sobic010G000800 Sobic007G005500--Sobic004G261600 Sobic006G077300 Sobic006G077300 Sobic007G005500--Sobic006G077300 Sobic006G139100 Sobic006G139100 Sobic004G145000--Sobic006G139100 Sobic004G340400 Sobic004G340400 Sobic004G145000--Sobic004G340400 Sobic006G034500 Sobic006G034500 Sobic004G145000--Sobic006G034500 Sobic001G447300 Sobic001G447300 Sobic004G145000--Sobic001G447300 Sobic001G455800 Sobic001G455800 Sobic004G145000--Sobic001G455800 Sobic004G145000--Sobic002G256700 Sobic003G036400 Sobic003G036400 Sobic004G145000--Sobic003G036400 Sobic004G145000--Sobic003G104000 Sobic006G166200 Sobic006G166200 Sobic004G145000--Sobic006G166200 Sobic004G228800 Sobic004G228800 Sobic004G261600--Sobic004G228800 Sobic004G261600--Sobic006G126100 Sobic004G261600--Sobic003G209200 Sobic004G261600--Sobic003G104000 Sobic004G261600--Sobic007G005500 Sobic001G251200 Sobic001G251200 Sobic004G261600--Sobic001G251200 Sobic001G415300 Sobic001G415300 Sobic004G261600--Sobic001G415300 Sobic004G261600--Sobic004G004300 Sobic008G099800 Sobic008G099800 Sobic004G261600--Sobic008G099800 Sobic002G256700--Sobic003G104000 Sobic001G493700 Sobic001G493700 Sobic002G256700--Sobic001G493700 Sobic002G256700--Sobic007G054800 Sobic002G256700--Sobic001G251100 Sobic002G256700--Sobic002G142900 Sobic002G256700--Sobic004G131300 Sobic002G256700--Sobic006G280000 Sobic002G133300 Sobic002G133300 Sobic002G256700--Sobic002G133300 Sobic002G256700--Sobic001G117200 Sobic002G401500 Sobic002G401500 Sobic004G322400--Sobic002G401500 Sobic002G042600 Sobic002G042600 Sobic004G322400--Sobic002G042600 Sobic009G131300 Sobic009G131300 Sobic004G322400--Sobic009G131300 Sobic010G223100 Sobic010G223100 Sobic004G322400--Sobic010G223100 Sobic008G124800 Sobic008G124800 Sobic004G322400--Sobic008G124800 Sobic002G179400 Sobic002G179400 Sobic004G322400--Sobic002G179400 Sobic010G059500 Sobic010G059500 Sobic004G322400--Sobic010G059500 Sobic001G065100 Sobic001G065100 Sobic004G322400--Sobic001G065100 Sobic010G275500 Sobic010G275500 Sobic004G322400--Sobic010G275500 Sobic003G209200--Sobic007G005500 Sobic003G209200--Sobic006G260500 Sobic003G209200--Sobic006G077300 Sobic003G209200--Sobic006G021700 Sobic003G209200--Sobic005G062200 Sobic003G209200--Sobic004G241900 Sobic003G209200--Sobic004G261600 Sobic005G110499 Sobic005G110499 Sobic003G209200--Sobic005G110499 Sobic009G077600 Sobic009G077600 Sobic003G209200--Sobic009G077600 Sobic003G337300--Sobic003G104000 Sobic010G004100 Sobic010G004100 Sobic003G337300--Sobic010G004100 Sobic002G137400 Sobic002G137400 Sobic003G337300--Sobic002G137400 Sobic004G039600 Sobic004G039600 Sobic003G337300--Sobic004G039600 Sobic006G131000 Sobic006G131000 Sobic003G337300--Sobic006G131000 Sobic004G344901 Sobic004G344901 Sobic003G337300--Sobic004G344901 Sobic003G337300--Sobic004G322400 Sobic003G332500 Sobic003G332500 Sobic003G337300--Sobic003G332500 Sobic003G337300--Sobic001G415300
Octagon: transcription factors


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