Gene annotation
Transcriptome id Sobic.006G166200.1
Synonym EBS4, ALG12, Sb06g024210
Functional annotation Alg9-like mannosyltransferase protein, putative, expressed
UniProt C5YD38
Pfam PF03901
Panther DB PTHR22760 PTHR22760:SF1
NCBI CDD KOG2516; Protein involved in dolichol pathway for N-glycosylation (mannosyltransferase family)
KEGG Orthology K03847; alpha-1,6-mannosyltransferase
Gene Ontology GO:0016757; transferase activity, transferring glycosyl groups


Orthologs (automatic annotation)
TAIR AT1G02145 : homolog of asparagine-linked glycosylation 12
RAP-DB (Rice) LOC_Os04g46050.1 : Alg9-like mannosyltransferase protein, putative, expressed
MaizeGDB (Corn) Zm00025a010375
Brachypodium KQJ83890 , KQJ83891 , KQJ83892 , KQJ83887 , KQJ83886 , KQJ83885 , KQJ83884 , KQJ83889 , KQJ83888
Barley HORVU2Hr1G093330.8 , HORVU2Hr1G093330.6 , HORVU2Hr1G093330.4 , HORVU2Hr1G093330.2 , HORVU2Hr1G093330.3 , HORVU2Hr1G093330.1 , HORVU2Hr1G093330.17 , HORVU2Hr1G093330.10 , HORVU2Hr1G093330.11 , HORVU2Hr1G093330.13 , HORVU2Hr1G093330.18
Wheat TraesCS2A02G391900 , TraesCS2A02G391900 , TraesCS2D02G390100 , TraesCS2D02G390100
Populus -


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cDNA sequences
Sobic.006G166200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G133800 NEF1, putative, expressed -
2 Sobic.004G053500 HEAT repeat family protein, putative, expressed K17263: CAND1, cullin-associated NEDD8-dissociated protein 1
3 Sobic.008G124800 expressed protein -
4 Sobic.003G405500 mannosyl-oligosaccharide glucosidase, putative, expressed K01228: mannosyl-oligosaccharide glucosidase
5 Sobic.006G224800 expressed protein -
6 Sobic.001G145400 threonyl-tRNA synthetase, mitochondrial precursor, putative, expressed K01868: TARS, threonyl-tRNA synthetase
7 Sobic.010G059500 pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16, putative, expressed K12818: DHX8, ATP-dependent RNA helicase DHX8/PRP22
8 Sobic.002G235200 PPR repeat domain containing protein, putative, expressed -
9 Sobic.009G201700 oligosaccharyl transferase, putative, expressed K07151: dolichyl-diphosphooligosaccharide---protein glycosyltransferase
10 Sobic.001G447300 ATP-binding cassette sub-family E member 1, putative, expressed K06174: ABCE1, ATP-binding cassette, sub-family E, member 1
11 Sobic.005G110499 - K14006: protein transport protein SEC23
12 Sobic.002G429300 importin subunit beta, putative, expressed -
13 Sobic.004G256500 WD domain, G-beta repeat domain containing protein, expressed K12616: enhancer of mRNA-decapping protein 4
14 Sobic.004G131300 expressed protein K12617: PATL1, DNA topoisomerase 2-associated protein PAT1
15 Sobic.001G474400 conserved oligomeric Golgi complex component 8, putative, expressed -
16 Sobic.002G430300 HEAT repeat family protein, putative, expressed K06100: symplekin
17 Sobic.006G277000 heat shock protein DnaJ, putative, expressed -
18 Sobic.002G401500 WD domain, G-beta repeat domain containing protein, expressed K14005: protein transport protein SEC31
19 Sobic.002G371700 signal recognition particle 68 kDa protein, putative, expressed K03107: signal recognition particle subunit SRP68
20 Sobic.005G062200 transmembrane 9 superfamily member, putative, expressed K17087: transmembrane 9 superfamily member 3


Gene co-expression network
sample Sobic006G166200 Sobic006G166200 Sobic005G133800 Sobic005G133800 Sobic006G166200--Sobic005G133800 Sobic004G053500 Sobic004G053500 Sobic006G166200--Sobic004G053500 Sobic008G124800 Sobic008G124800 Sobic006G166200--Sobic008G124800 Sobic003G405500 Sobic003G405500 Sobic006G166200--Sobic003G405500 Sobic006G224800 Sobic006G224800 Sobic006G166200--Sobic006G224800 Sobic001G145400 Sobic001G145400 Sobic006G166200--Sobic001G145400 Sobic010G059500 Sobic010G059500 Sobic006G166200--Sobic010G059500 Sobic002G235200 Sobic002G235200 Sobic006G166200--Sobic002G235200 Sobic009G201700 Sobic009G201700 Sobic006G166200--Sobic009G201700 Sobic005G133800--Sobic006G166200 Sobic005G133800--Sobic004G053500 Sobic002G430300 Sobic002G430300 Sobic005G133800--Sobic002G430300 Sobic005G133800--Sobic006G224800 Sobic005G110499 Sobic005G110499 Sobic005G133800--Sobic005G110499 Sobic005G133800--Sobic003G405500 Sobic004G256500 Sobic004G256500 Sobic005G133800--Sobic004G256500 Sobic003G062300 Sobic003G062300 Sobic005G133800--Sobic003G062300 Sobic001G058200 Sobic001G058200 Sobic005G133800--Sobic001G058200 Sobic002G401500 Sobic002G401500 Sobic004G053500--Sobic002G401500 Sobic002G179400 Sobic002G179400 Sobic004G053500--Sobic002G179400 Sobic002G335600 Sobic002G335600 Sobic004G053500--Sobic002G335600 Sobic004G053500--Sobic006G166200 Sobic006G032300 Sobic006G032300 Sobic004G053500--Sobic006G032300 Sobic004G053500--Sobic005G133800 Sobic002G340900 Sobic002G340900 Sobic004G053500--Sobic002G340900 Sobic003G296900 Sobic003G296900 Sobic004G053500--Sobic003G296900 Sobic005G162500 Sobic005G162500 Sobic004G053500--Sobic005G162500 Sobic008G124800--Sobic002G340900 Sobic006G021700 Sobic006G021700 Sobic008G124800--Sobic006G021700 Sobic007G019300 Sobic007G019300 Sobic008G124800--Sobic007G019300 Sobic004G322400 Sobic004G322400 Sobic008G124800--Sobic004G322400 Sobic001G404600 Sobic001G404600 Sobic008G124800--Sobic001G404600 Sobic003G233400 Sobic003G233400 Sobic008G124800--Sobic003G233400 Sobic002G308500 Sobic002G308500 Sobic008G124800--Sobic002G308500 Sobic008G124800--Sobic003G405500 Sobic008G124800--Sobic002G401500 Sobic003G405500--Sobic001G145400 Sobic003G405500--Sobic008G124800 Sobic003G405500--Sobic002G430300 Sobic009G084900 Sobic009G084900 Sobic003G405500--Sobic009G084900 Sobic003G405500--Sobic006G166200 Sobic004G141800 Sobic004G141800 Sobic003G405500--Sobic004G141800 Sobic006G077200 Sobic006G077200 Sobic003G405500--Sobic006G077200 Sobic003G405500--Sobic010G059500 Sobic003G314700 Sobic003G314700 Sobic003G405500--Sobic003G314700 Sobic006G224800--Sobic003G062300 Sobic003G416700 Sobic003G416700 Sobic006G224800--Sobic003G416700 Sobic006G224800--Sobic006G166200 Sobic003G189600 Sobic003G189600 Sobic006G224800--Sobic003G189600 Sobic006G224800--Sobic004G053500 Sobic009G249700 Sobic009G249700 Sobic006G224800--Sobic009G249700 Sobic004G051200 Sobic004G051200 Sobic006G224800--Sobic004G051200 Sobic002G295500 Sobic002G295500 Sobic006G224800--Sobic002G295500 Sobic006G224800--Sobic002G430300 Sobic006G086600 Sobic006G086600 Sobic001G145400--Sobic006G086600 Sobic001G035200 Sobic001G035200 Sobic001G145400--Sobic001G035200 Sobic001G145400--Sobic010G059500 Sobic001G145400--Sobic006G077200 Sobic001G145400--Sobic003G405500 Sobic010G007100 Sobic010G007100 Sobic001G145400--Sobic010G007100 Sobic004G340400 Sobic004G340400 Sobic001G145400--Sobic004G340400 Sobic001G145400--Sobic009G084900 Sobic004G085000 Sobic004G085000 Sobic001G145400--Sobic004G085000 Sobic010G059500--Sobic009G084900 Sobic009G131300 Sobic009G131300 Sobic010G059500--Sobic009G131300 Sobic010G059500--Sobic001G035200 Sobic004G096400 Sobic004G096400 Sobic010G059500--Sobic004G096400 Sobic006G234700 Sobic006G234700 Sobic010G059500--Sobic006G234700 Sobic010G059500--Sobic001G145400 Sobic010G034100 Sobic010G034100 Sobic010G059500--Sobic010G034100 Sobic010G059500--Sobic006G077200 Sobic001G493200 Sobic001G493200 Sobic010G059500--Sobic001G493200 Sobic002G235200--Sobic006G086600 Sobic001G089600 Sobic001G089600 Sobic002G235200--Sobic001G089600 Sobic002G235200--Sobic001G145400 Sobic002G235200--Sobic010G059500 Sobic003G146600 Sobic003G146600 Sobic002G235200--Sobic003G146600 Sobic002G235200--Sobic006G166200 Sobic003G036400 Sobic003G036400 Sobic002G235200--Sobic003G036400 Sobic004G320500 Sobic004G320500 Sobic002G235200--Sobic004G320500 Sobic004G224600 Sobic004G224600 Sobic002G235200--Sobic004G224600 Sobic009G201700--Sobic009G131300 Sobic007G054800 Sobic007G054800 Sobic009G201700--Sobic007G054800 Sobic006G103200 Sobic006G103200 Sobic009G201700--Sobic006G103200 Sobic004G030900 Sobic004G030900 Sobic009G201700--Sobic004G030900 Sobic004G277200 Sobic004G277200 Sobic009G201700--Sobic004G277200 Sobic009G201700--Sobic010G059500 Sobic009G201700--Sobic006G166200 Sobic009G201700--Sobic009G084900 Sobic002G429300 Sobic002G429300 Sobic009G201700--Sobic002G429300
Octagon: transcription factors


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